Ostreococcus lucimarinus: OSTLU_12589
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Entry
OSTLU_12589 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14848
ribosome assembly protein RRB1
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_12589
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
OSTLU_12589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
CAF1C_H4-bd
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
MIOS_WD40
ANAPC4_WD40
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
5002431
NCBI-ProteinID:
XP_001418159
JGI:
12589
UniProt:
A4RYE7
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Position
6:103394..104719
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AA seq
441 aa
AA seq
DB search
MDADRGDGEAREARRKRPEVWRPGSAEDEDVELEYDESAYDALHAFSHEWPCLSLDVMRD
DLGEGREVFPHEMTIVTGTQAMEATKNVLSVIRVSRIKKTRRDADADEDMEASDSDDDED
GGSDAPTLTVASVVHHGCVNRLRAMPQRPSTCASWSDSGHVMIWDLSAQLKKVMTSTNDS
KGKIDPPSRVTPTQVFTGHKDEGYALDWSSVCEGRLASGDCAGAIHTWDMVQGKWDVGAT
PYTGHYSSVEDIQWSPTERDVFISCSADQTVCVWDTRQRAKPALRVKTHDSDVNVLSWNR
LANSMVATGADDGSLRIWDLRNFNETNAQFVANFTFHRAAVTSVDWAPFDSAMLASSSAD
NTVCVWDLAVERDAEEEAAALAAKDNAAPPEDLPPQLMFVHQGLKDPKEIKWHRQIPGAC
VTTAADGFNIFKAYNVGPAVP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatcgaggcgacggagaggcgcgagaggcgcggcgtaaaagacccgaggtg
tggcgaccgggatcggcggaagacgaggacgtggagctggagtacgacgagagcgcgtac
gacgcgctgcacgcgttttcgcacgagtggccgtgcctgtcgctggacgtgatgagggat
gatttaggcgaaggaagggaggtgttcccgcacgagatgacgatcgtgacgggaacgcaa
gcgatggaggcgacgaagaacgtgctgagcgtgattagggtgagtcggattaagaagacg
cggcgagacgcggacgcggacgaggacatggaggcgagcgatagcgacgacgacgaggac
ggtgggtcagacgcgccgacgttgacggtggcgagcgtggtgcatcatggatgcgtgaat
agattgcgagcgatgccgcaaagaccgagcacgtgcgcgagttggagcgattctgggcac
gtgatgatttgggatttgagcgcgcagttgaaaaaggtgatgacgtcgacgaacgattcc
aagggcaagatcgatccaccgtctcgagtgacgcctacgcaagtgttcacgggtcataaa
gacgaaggctacgcccttgattggtcctcggtgtgcgagggaaggctcgcgagtggtgat
tgcgccggggcgattcacacgtgggacatggtgcaaggtaagtgggacgtcggcgcgacg
ccgtacaccgggcactattcgagcgtggaggacatccagtggtccccgaccgagcgagat
gtgttcatatcgtgctctgccgatcaaacggtgtgcgtgtgggacacgcgacagcgcgca
aagccggcgttgcgcgtcaagacgcacgactcggacgtcaacgttctgtcgtggaacaga
ctcgccaacagcatggtcgccacaggcgccgacgacggatcgttgcgaatctgggatctt
cgcaactttaacgaaaccaacgcgcaattcgtggccaacttcaccttccaccgtgccgcg
gtgacgtccgtggattgggcgccgttcgactcagccatgctcgcctcttcctccgccgac
aacaccgtctgcgtgtgggatttagccgtcgagcgcgacgccgaggaagaagccgccgcg
ctcgcggcgaaggataacgccgcgccgcccgaggaccttcctccgcagctcatgttcgtc
catcaaggcttgaaggatccaaaggaaatcaagtggcaccgtcaaatcccgggcgcgtgc
gtcaccaccgccgccgacggcttcaacattttcaaagcctacaacgtcggccccgccgtg
ccgtga
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