KEGG   Ostreococcus lucimarinus: OSTLU_12608
Entry
OSTLU_12608       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K14298  mRNA export factor
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OSTLU_12608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_12608
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_12608
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     OSTLU_12608
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    OSTLU_12608
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_Aladin EIF3I WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 VPS11_N Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 5002223
NCBI-ProteinID: XP_001418430
JGI: 12608
UniProt: A4RYP8
LinkDB
Position
6:complement(join(280244..281137,281248..281391))
AA seq 345 aa
MSWGQAATQAPANPNGDFLVANPPNDGISSLSWSPTGNFLVATAWDGDVYCYEVANNGQA
MPKASTKHEAPVLCSSWSSDGASVFTGGCDNIAKKWDLASGQATQIAQHDGAIRHMAWIE
QVGLLVTGSWDRTLKYWDTRQPNPALQVQLPERCYALDVTHPLLVVGCAERQIQIFNLSN
PQVPYKQLLSPLKYQTRCVATFPDRSGYLVGSIEGRVAVQHVEDNLQSKNFTFKCHREGT
QDIYAVNSISFHPTFGTFVTAGADGNFNFWDKDSKQRLKNMTKCSAPISCGNFNRDGTIY
AYAVSYDWSKGGDNPLSNTPNNIYLHAVNETEVKPRPAKSGIGRR
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcgtggggacaggcggcgacgcaggcgccggcgaacccgaacggggactttctggtg
gcgaatccgccgaacgatgggataagctcgctgtcgtggtcgccgacggggaattttttg
gtggcgacggcgtgggacggagacgtgtattgctatgaggtggcgaacaatgggcaggcg
atgccgaaggcgtcgacgaagcacgaggcgccggtgctgtgtagctcgtggtcgagcgac
ggcgcgagcgtgttcacgggcgggtgcgataacatcgcgaagaaatgggacttggcgagc
gggcaggcgacgcagatcgcgcagcacgatggggcgatcagacacatggcgtggatcgaa
caggtggggttgttagtcaccggatcttgggatcgaacgttgaagtattgggacacgcgt
cagccgaatcccgcgctccaggttcagctccccgaacggtgttacgcgttagatgtcacg
caccctttgctcgtcgtgggatgtgccgagagacagattcagattttcaacttgagcaac
ccgcaagtgccgtacaagcagttgttatcgccgctcaagtatcagacgcgatgcgtcgcc
acgtttcccgatcgctcgggctacttggtcggctccatcgaaggacgcgtcgcggttcag
cacgtggaagacaatttgcaaagcaagaactttactttcaaatgtcacagagaaggcacg
caagacatttacgccgtcaactccatctcgttccacccgacgtttggaacgttcgtcacc
gcgggcgccgacggcaacttcaacttttgggacaaggatagtaagcaacgcctaaagaac
atgaccaagtgttcggcacccatctcgtgcgggaacttcaatcgcgatgggacgatttac
gcgtacgcggtgtcgtacgattggagcaagggcggtgacaacccgctgtcaaacacgccg
aataacatttacttgcacgccgtgaacgaaacagaagtcaagccgcggccggcgaagagc
ggaatcggtcgtcgataa

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