Ostreococcus lucimarinus: OSTLU_12759
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Entry
OSTLU_12759 CDS
T01029
Symbol
CHR3506
Name
(RefSeq) predicted protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OSTLU_12759 (CHR3506)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_12759 (CHR3506)
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_12759 (CHR3506)
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
OSTLU_12759 (CHR3506)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
OSTLU_12759 (CHR3506)
RSF complex
OSTLU_12759 (CHR3506)
WICH complex
OSTLU_12759 (CHR3506)
B-WICH complex
OSTLU_12759 (CHR3506)
NORC complex
OSTLU_12759 (CHR3506)
BRF complex
OSTLU_12759 (CHR3506)
NuRF complex (fruit fly)
OSTLU_12759 (CHR3506)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
HAND
HTH_Hrp3
SWI2_SNF2
CHDII_SANT-like
DUF4800
DBINO
Motif
Other DBs
NCBI-GeneID:
5002700
NCBI-ProteinID:
XP_001419020
JGI:
12759
UniProt:
A4S0Q6
LinkDB
All DBs
Position
7:complement(join(705643..706386,706414..708540))
Genome browser
AA seq
956 aa
AA seq
DB search
MELERVREDQNKKIAGDNKAGKWKFLLAQTEVFAHFLSGTKAANEAANKGKRGRNKSHAA
EESEDAELVEHAEDYQAVRLTSQPTCIKFGKMREYQIAGLNWMIRLFDHGINGILADEMG
LGKTLQTISLLGYLAEYRGVTGPHMVVVPKSTLGNWMNEFKRWCPMIRTFKFHGNAEERE
AQKAKFLVPGGFDVCVTSYEMVIKEKTALKKFHWRYIIIDEAHRLKNENSRLSIVLRTFS
ANNRMLITGTPLQNNLHELWALLNFLLPEVFGNAGQFDEWFANVEDGEGGSGAVVSQLHK
VLRPFLLRRLKTEVETSLPPKKETILKIGMTEMQKTFYKRILQKDIDIVNSGADRSRLLN
IVMQLRKCCNHPYLFQGAEPGPPYITGDHLIESSGKLALLDKLLPRLMQRGSRVLIFSQM
TRLLDILEDYLMYRNYQYCRIDGSTDGAVREDHIDAFNKEGSEKFCFLLSTRAGGLGINL
ATADTVIIYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCTDGSVEEKVIEKAYKKLALD
ALVIQQGRLQENKKNLGKDELLAMVRFGAEKIFDSSTTSITDEDVDAIMARGEEETKALN
SKMQGFTEKAIQFSMGAENSLYEFEDEDDKNVAALPEGIDMKTIISSNWIDPPKRERKKN
YNESDYYRSAMAQAARPSKPMGPKIAKLQQMHDFQFYNTARIQEIYDKDKDKKKEEAKAA
QDEEAPTEAEEDDPNAPPAITEEEKAEQESLLSQGFTEWSRRDFQAFCRLSEKYGREDVE
SIASEMEGKTLKEVKDYAAVFWKRYEEIADHPRIISNIEKGEQKIQRQHDMLKAVREKIA
KYKNPWRELKLTYGPNKFKSFTEEEDRFLLCSIPEVGFGNWDELKAQIRQHWQFRFDWFI
KSRTPKELGRRVETLISLIEKEAQDRGDKKRDAEAEAEADGSAQKKVKVEAEGVTA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgaacgcgtgcgagaggatcagaacaagaagattgcgggagataataaggcg
gggaagtggaagtttttgttggcgcaaaccgaggtcttcgcgcactttttgtcggggacg
aaggcggcgaacgaggcggcgaacaagggcaagcgcgggcgcaacaagagccacgcggcg
gaggagtcggaggacgccgagctcgtggaacacgctgaggattaccaagcggtgcgtttg
acgtctcaaccgacgtgcattaagtttggcaagatgcgagagtaccaaattgcgggtttg
aactggatgattcgattgttcgatcacggcatcaacggcatcttggcggacgagatgggt
ctcgggaagacgttgcagacgatttctcttctcggttacctcgccgaataccggggtgtt
accggaccgcacatggttgtcgtgccgaaatccacgctcggtaactggatgaacgagttt
aagcgttggtgtccgatgattcgcacgttcaagtttcacggaaacgccgaagagcgcgag
gcgcaaaaggccaagtttttggtgccgggcggtttcgacgtgtgcgtgacgtcttacgaa
atggtcatcaaggagaagactgcgttgaagaagtttcactggcgttacatcatcatcgac
gaagcgcaccgcttgaagaatgaaaattctcgtctttccatcgtcctaagaacgttttcg
gcgaacaaccgcatgttgatcaccgggacgccgcttcaaaacaaccttcacgagctctgg
gctttgctcaactttttgctccccgaagtgttcggtaacgccggtcagttcgatgagtgg
tttgcgaacgttgaagacggtgagggtggttccggtgccgtcgtgtctcagcttcacaag
gttttacgccccttcttgttgcgtcgattgaagacggaggtcgaaaccagcctcccgccg
aagaaggagacaattctcaagattggcatgactgagatgcaaaaaacgttttacaagcgc
atcttgcaaaaggacatcgacattgttaacagtggcgcggatagatctcggcttttgaat
atcgtcatgcagcttcgcaagtgctgcaaccatccgtacttgttccaaggtgccgaaccg
ggtccgccgtacatcaccggggatcacctcatcgagagctcgggtaagctcgcgcttttg
gacaagcttttgcctcgtctcatgcaacgcggcagtcgtgtgctgatcttctctcagatg
actcgtttgctcgacatcttggaagattacttgatgtacagaaactaccaatattgtcgc
atcgacgggagcacggatggcgccgtccgcgaagaccacattgacgccttcaacaaggaa
ggttcggagaagttctgtttcttgctttccacgcgggcgggtggtttaggtattaacctc
gccactgcggacaccgtcatcatctacgacagcgactggaacccgcaaatggatcttcag
gcgatggatcgagcgcaccgcatcggtcaaaagaaggaggtacaagtgttccgcttttgc
accgacggtagcgtcgaggagaaggtgatcgagaaagcgtacaagaaactcgcgctcgat
gctctcgtcattcaacaaggacgattgcaagagaacaagaagaacctcggcaaggatgaa
ctcttggcgatggttcgctttggcgccgagaagattttcgactcgtcgacgacgtcgatc
acggacgaagatgtcgacgccatcatggctcgcggtgaagaagaaaccaaagcactcaat
agcaaaatgcaaggtttcacggagaaggccattcagttctctatgggtgccgagaactcg
ctttacgaattcgaggacgaagacgacaaaaacgtcgccgcgttgccagagggcattgac
atgaagaccatcatcagcagcaactggatcgatcctcccaaacgcgaacgtaagaagaac
tacaacgagtctgattactatcgcagcgccatggcgcaagcggctcgcccatccaagcca
atgggaccgaagattgccaagctgcagcaaatgcacgacttccagttttacaacaccgcg
cgaattcaagaaatttacgacaaggataaagacaagaagaaggaggaagctaaagctgcg
caagatgaggaggcgcccactgaagcggaggaagacgatcccaacgcgcctccggcgatc
acggaggaagaaaaggctgagcaagaatcgctcctctctcaaggtttcacagaatggtct
cgccgagacttccaagccttctgccgactcagcgagaagtacgggcgcgaagacgtggag
tctattgcgagtgagatggaaggaaagactctcaaagaggtcaaggattacgccgccgta
ttctggaaacgttacgaagagattgccgatcatccgcgcatcatcagcaacatcgaaaag
ggtgaacaaaagattcagcgtcaacacgacatgctgaaggctgtacgagaaaagatcgcc
aagtacaagaatccgtggcgcgagctcaagttgacgtatggtccgaacaaattcaaatcg
ttcaccgaagaggaggataggttcttgttgtgctccatccccgaagttggctttgggaat
tgggacgagctcaaggcgcagattcgccagcactggcaattccgattcgattggttcatc
aaaagcagaacgccaaaagagctcggtcgccgcgtggagactttaatttctctcatcgag
aaagaggctcaggacagaggcgacaagaagcgagacgccgaagccgaagccgaagccgac
gggagcgcgcagaaaaaggtgaaggttgaagctgaaggcgtgaccgcgtag
DBGET
integrated database retrieval system
