Ostreococcus lucimarinus: OSTLU_12863
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Entry
OSTLU_12863 CDS
T01029
Symbol
HDS
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative chloroplast precursor (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) (ISPG)
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu00900
Terpenoid backbone biosynthesis
olu01100
Metabolic pathways
olu01110
Biosynthesis of secondary metabolites
Module
olu_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
OSTLU_12863 (HDS)
Enzymes [BR:
olu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
OSTLU_12863 (HDS)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
OSTLU_12863 (HDS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GcpE
Zn_ribbon_9
YbaB_DNA_bd
Sgf11
DUF7575
Motif
Other DBs
NCBI-GeneID:
5003594
NCBI-ProteinID:
XP_001419500
JGI:
12863
UniProt:
A4S2B3
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All DBs
Position
9:137320..139362
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AA seq
680 aa
AA seq
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MDERGVLMPTGKYCVNHAETVRRKTRTVHVGNVKIGSEHPIVKQTMTTSDTRDVEKTVAE
VIRCADAGAEMVRITVQGMQEAKACKIIKETLVAKGYDTPLIADIHFAPKVAMMVAECFD
KIRVNPGNFADGRKTFENILYETDEEYNAELAEIEEIFTPLVLKCKERGVAMRIGTNHGS
LSARTLSRFGDTPMGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQAYRLLSHEMYK
LGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASELEIEPCTRLAN
LGMKACAENIGVEQFEDSVRDFKTFTRRTGDLPEQKDSDAIDFRNILHRDGSVLAAVTTA
QLASEDGFYRELGAKLAVGMPLRDIATCDSILLSEVPAASEEKALRSIRRLQEIGCGVVV
PADLLRATPLENAIALVSADEVGAPLPAGAARKAVTLNGFETVEQLKAVAASDAVMVLIK
TKDGESRLHSSRRIAEVMAQVGAKMPVIHHMYMPTGDKSDIVIQSGSQVGGLLVDGFGDG
VLIQYAGSDKDVSLDFLRTTSFGLLQGSRMRNTKTEYVSCPSCGRTLFDLQEVTAQIQEK
TGHLPGVAIAVMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKEVVKRGIAMETACDELI
QLIKDNDRWIEKEVEEAVAA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacgaggcgtgctgatgccgacggggaagtactgcgtgaatcacgcggagacg
gtgcgaaggaagacgcgcacggtgcacgtgggcaacgtgaagattggctcggagcaccca
atcgtgaagcagacgatgacgacgagcgacacgagagacgtcgagaagacggtggcggag
gtgattcgatgcgccgatgccggtgcggagatggtgcggatcacggttcaggggatgcaa
gaggcgaaggcgtgcaagatcatcaaggagacgctcgtggcgaagggatacgatacgccg
ctcatcgcggatatccacttcgcgccgaaggtggcgatgatggtggctgaatgcttcgat
aagattcgcgtgaaccccggtaactttgcggatggtcgtaagacgtttgaaaacatcctg
tacgaaacggatgaagagtacaacgccgaactcgcggagattgaagaaatcttcacgccg
ctcgtgttgaagtgcaaggagcgaggcgtggcgatgcgcatcggtacgaaccacggttct
ttgtccgcgcgcacgttgtcgcgctttggtgacacgccgatggggatggtggaatctgcg
ttcgaattcgcgcgcatttgccgcaagcacgattaccacaactttgtcttctccatgaag
gcgtctaaccctctcgtcatggtgcaagcgtatcgcctgttgtcccacgagatgtacaag
ctcggctgggactacccgcttcacctcggcgtcaccgaagccggcgaaggcgaagacggt
cgcatgaagtcttccatcggtatcggtgctctcttacttgacggtctcggagacaccatt
cgcgtgtctctcaccgaagcatccgagctcgaaatcgagccgtgcacgcgcttggccaac
ctcggtatgaaggcgtgcgccgaaaacatcggtgtcgagcaattcgaggactctgtccgt
gacttcaagaccttcacgcgcagaactggtgatttgcccgaacaaaaggactctgatgcg
attgatttccggaacattctccaccgcgacggctctgtgctcgccgccgtcaccacggcg
caactcgcgtcggaagatggcttctaccgcgaattgggcgccaagcttgcggtcggtatg
ccgcttcgtgatatcgccacctgtgattccatcttgctcagcgaagttcccgccgcgtcc
gaagagaaggcgctccgatctatccgtcgcctccaagaaatcggctgcggcgttgtcgtg
ccggctgaccttctccgagcgacgccgttggagaacgccatcgccctcgtcagcgccgac
gaagtcggtgctccgttgccggccggtgccgcgcgaaaggctgtcacgttgaacggcttc
gagaccgtcgaacaactcaaggctgtcgcagcgtctgacgccgtcatggtgctcatcaag
acgaaggatggcgagtctcgtctccactcttctcgccgcatcgccgaagtgatggcgcaa
gtcggtgcgaagatgccggtcattcatcacatgtacatgccgaccggcgacaagtcggac
atcgtcattcaatccggctcccaagtcggtggtttgctcgtcgacggctttggcgacggc
gtgttgatccaatacgccggctccgacaaggatgtctcattggacttccttcgtacgacc
tcgttcggtttgctccaaggctctcgtatgcgtaacacgaagacggagtacgtctcttgc
ccgtcgtgcggacgcaccctcttcgacttgcaagaagtcacggcgcaaatccaagagaag
actggacacttgcctggcgtcgccatcgccgttatgggttgcatcgtcaacggtccgggt
gagatggcggatgcggatttcggttatgttggtggtgctccgggtaagattgacttgtac
gtcggtaaggaagtcgtcaagcgaggtatcgcgatggaaactgcgtgtgatgaactcatt
caactcatcaaggacaacgaccgctggatcgaaaaagaagtcgaggaagccgtcgccgcg
tga
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