Ostreococcus lucimarinus: OSTLU_14422
Help
Entry
OSTLU_14422 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_14422
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSTLU_14422
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
OSTLU_14422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_30
F-box
AAA_22
ResIII
F-box-like
FUSC
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
5000731
NCBI-ProteinID:
XP_001416537
JGI:
14422
UniProt:
A4RTQ9
LinkDB
All DBs
Position
3:join(46258..49826,50063..51470)
Genome browser
AA seq
1658 aa
AA seq
DB search
MFTSAREVLAKQTETDASSRGDDSTRARDANAPKPSFDVDAQDAKNIARAEAKAERIARA
EAKRKRRDDEPKQTSLIDAWRRGGARASTSDVGVGGDVIRRLLSCAPTSFYADARLVCKA
WRDAVDDPKFMPCVKLNRALALGGARADAAEAYLNEVTGREPGDAGVGPLARHAATTKTL
FKSRLDVETFCRFVEEDEHLSGARDIRGEVQPGYDEPDDLTKIDDFWQSLGTAASRSFLG
TVGDVAATIRVIAKFACVQEPITRGGEREADNTRANGWAVLVIAMTHVAENEWIASRLLR
AARRALRSDASAEFVEEDLTEFVNLLIAYVRLESRSYADASEPAKVHACRRMKARLSAAY
DYANLHDEREQNSSDADLKNVVGNSSAATRPTDTMRKTSRLTHEQEAIVSTSLRPPQWMV
VHAFAGSGKTTTLVEYAKRNPSKRFLYLAFNRAITEEAKTKFPANTDAKTFHGLAYGLAT
WYKAGGKKLHFGDKLRSSEVCKALGKSISDRAVGKGLVTLQNFLVSADENISKEHVPTEG
VKPASVDEIIQVAETLWRMMKDRSSNDVPLTHAGYMKLYQLQRPRLDIDMSRNKNKTGYD
VILLDEAQDIAPVMFDIVLRQTKCAKILVGDVHQQIYNFTGAMNVMDKIDDLVASHQVTH
RRLVRSFRFGVEIANVANAILNIKRESAFLVGARLSELDQTCVFSTENVASSDPRLKTVR
GPPPLSTVIVGDGRREQLAVLVRSNYNLISALMYLESSRSKVHVIGGVDALKLDQVCDFV
RLILDEDLGSISDRYIKMFVTYGGGDLARFDQRQDQESFVERNALTRIYEIAENQDDADT
LNRIRIAQSYREKMFKLVKRLKDSSFLSNEPNANFIVATAHKSKGLEFDNVMIWDDFEDV
DRVWRRGDKYVSISTDPVFGDADTLVPVDEINLTYVAVTRAKKRVFLNKSIATLLAFPSH
GNVPMYDEIANGFALFPERFPLRQHRAADRGLSPYVLRRVEFHPNDLQATHESVLNALSW
NPLFNGFHASMGTVQVPGEGARPVRIERPVDGNVCQCCIHRVGDLEDMPLLLGTFVWQVD
LKSGLVCVSDRGVEQRVCTADSGVRFATADGDAKDAPRFRRPVDDYGDANHHDPAHPRIY
ALQNPPYLFRTRRCAGCVDPARAREKLRALEFDAYERDEFSRLPLFHTMRGAARSNAARA
KRKNFASGTAGASRTVAAERERAIPKGEACDALPMDWTIKSSVRLSSRARSFRWGTCAGA
NATSEGLRAYSGGDASSLSIDGGESGDGGDDDEARLEKKQKLLTRAMYSCAYPELGLSDE
QLASMRATPSGNEWVRKRESMWVDALVSLYGLLKVRQCYAFYVVYRERSILFCAPGVGGV
TDGGYAVVTNSNAKIRAALKDAAVDFTSADEEALAIGKAKTVWAQKWRPEDETQGLLDNL
AGDDASRAEITAHLAKMDNPSNARRRAADTIICRGAIAVNGLLNVLVEASGGDPGSSDGA
QHDVPILLAPVPFAHSSMKPLELKAQTNTMLSRKDGKNANALYQSSNATSMQTVYTAETD
RDELIPPWTLARVCAALALNHEDISATCMTHKPTHGLNVGVLAARDMSDSNTKHREAVLV
RECAYYDEAETSRIMAPPPLGSSVLSRIEYVNGTYYIP
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgtccgcgcgcgaggtcctggcgaaacagacggaaaccgacgcgtcgtcgcgc
ggcgacgactcgacgcgcgcgcgcgacgcgaacgcgccgaaaccgtcgttcgacgtcgac
gcccaagatgccaaaaacatcgcgcgcgccgaagcgaaagccgaacgcatcgcgcgcgcc
gaggcgaagcgcaagcgaagagacgacgaaccgaagcaaacgtctttaatcgacgcgtgg
cgacgcggtggggcgcgagcgtcgacgtcggacgtcggcgtcggcggcgatgtcatccga
cggttgttgagctgcgcgccgacgagtttctacgccgacgcgcgattggtgtgcaaggcg
tggcgagacgccgtggacgatccgaagttcatgccgtgcgtgaaactcaatcgagcgctc
gcgttgggtggcgcgcgcgcggatgcggcggaggcgtacttgaatgaggtcacgggacgc
gagccgggagacgcgggcgtcgggccgttggcgagacacgcggcgacgacgaagacgctg
ttcaaatcgcgattggacgtcgagacgttttgtcgattcgtggaggaggatgaacactta
tcgggggcgagagatatacgtggggaagtgcaaccggggtacgacgaacccgatgatttg
acgaagattgatgatttttggcagtcgctcggtacggcggcgtcgcgttcgtttctaggc
accgtcggcgacgtcgcggcgacgattcgggtgatcgcgaaatttgcgtgcgttcaagag
ccgatcacgcgcggcggcgagcgcgaggcggacaacacgcgagcgaacggctgggcggtg
ttggttatcgcgatgacgcacgtcgccgaaaacgaatggatcgcttctcggttgcttcga
gcggctcgacgcgcacttcgaagcgacgcgagcgcggaattcgttgaagaagacttgacc
gagtttgtcaatttgctcatcgcgtacgtgcgcttggaatcgagatcatacgcagacgca
tccgagccggcgaaagtccacgcatgccgacgtatgaaggcgcgattatcggccgcgtac
gattacgccaatcttcacgacgaacgggaacaaaactcaagcgacgcagatttgaaaaat
gtcgtggggaattcgagcgccgcaacgcgtccgacggatacgatgcgaaaaacatcgaga
ttgacacacgaacaggaagccatcgtctcgacgagtttgcgaccaccgcaatggatggtc
gtgcacgcgttcgcgggatcgggcaagacgacgactttggtcgagtacgcgaagagaaat
ccttcgaaacgatttctttatctcgcgttcaatcgtgccatcacggaagaagccaagaca
aagtttccagcgaatacggacgcgaagacgtttcacggattagcgtacgggctcgccacg
tggtacaaggcgggaggtaaaaaactacacttcggcgacaagcttcgatcgtccgaagtc
tgcaaagcgctcggaaaatcaatcagcgatcgggctgtgggcaaaggtttggtgacgctc
caaaactttctagtttctgccgatgaaaatatttcaaaggagcacgtgcccacggaaggt
gttaaacctgcgtctgtggacgaaatcattcaagttgccgagacgttgtggcgtatgatg
aaggaccgatcgagcaacgatgtgccgttgacgcacgccggctacatgaagctctaccaa
ctgcaacgtccgcgtctggatatcgacatgagtagaaataaaaacaagacgggatatgac
gtcattttgctggacgaagcgcaagatatcgcacctgtgatgtttgatatcgttcttcgg
caaacgaaatgcgcaaagattctcgtcggagacgtacatcaacaaatttacaacttcacc
ggagctatgaatgtgatggataaaatcgatgatctcgtggctagccatcaagtgacgcac
aggcggcttgtgagaagttttcgtttcggtgtggaaatcgccaatgtcgcaaacgctatc
ttgaacataaagcgcgagagcgcattccttgtcggcgcgcgattgagcgagctggatcaa
acgtgcgtgttctcaacggaaaacgttgcgtctagcgacccgagattgaagacagtacga
ggtccgccgcccttatctactgtgatcgtaggagacgggcgacgcgagcaactggcggtt
ctggttcgatcgaattacaatctcatttcggctttgatgtatctcgaatcctcgcgttcg
aaagtgcacgtcatcggtggcgtcgacgcgctcaagctcgaccaagtgtgtgatttcgtg
cgtttgatactcgacgaagatctaggatccatcagcgaccgatacatcaaaatgttcgtc
acgtacggcggcggcgatctggctaggtttgatcaacggcaagaccaagagagttttgtt
gagcgcaacgcgctgacgaggatatatgaaatcgctgagaaccaagacgacgcggacact
ctcaatcgaatacgcatcgcgcaaagttaccgcgagaagatgttcaaactcgtcaagcga
ttgaaagatagctcattcctttcgaacgagcccaacgcaaacttcatcgtcgccacggcg
cacaagtccaaggggttggagtttgataacgtgatgatatgggacgattttgaagacgtc
gatcgggtctggcgcagaggggacaagtacgtatcgatcagtacagatccggttttcggc
gacgcagacaccttggtccccgtcgatgaaatcaatttgacgtacgtggccgtgacgcgg
gcgaagaaacgcgttttcttgaacaaaagcatcgccaccctcttggcgttcccgtcgcat
ggaaacgtcccgatgtacgacgaaatcgcgaacggtttcgcgctctttccagagagattt
ccacttcggcaacatcgcgccgcagatagaggcctctctccgtacgtgcttcgacgcgtc
gagtttcatccgaacgacctccaggcgacgcatgaaagcgtcctgaatgcgctgagctgg
aatcccttgtttaacgggttccatgcgtcgatgggcaccgtgcaagtgcccggcgagggc
gcgaggccagttcgcatagaaaggccagtcgatgggaacgtgtgtcagtgttgtatccat
cgcgttggcgatcttgaagacatgccattattgttgggcaccttcgtctggcaagtcgac
ctcaagagtggtctcgtgtgcgtttccgaccgcggcgtcgagcaacgagtctgtaccgcc
gattccggcgtgcgcttcgcgaccgccgacggcgacgccaaagacgcgccgcggttccga
cgccccgtcgacgattacggcgatgcaaaccaccacgatcccgcgcatccgagaatttac
gcgctccaaaatcctccgtatctcttccgcacgcgacgctgcgccggatgcgtggatccc
gcgcgagcgcgcgagaagctgcgcgcgttagagttcgacgcgtacgaacgcgacgagttc
tctcgcctgccgctgtttcacaccatgcgcggcgccgcgcgatcgaacgccgcgcgcgcg
aagcgaaagaatttcgcatcgggaaccgcgggcgcgtcgcggacggtcgcggcggagcgc
gaacgcgcgatcccgaagggcgaggcgtgcgacgcgctgccgatggactggacgatcaag
tcgagcgtgcggttgagctcgcgggcgaggtcgttccgatgggggacgtgcgcgggggcg
aacgcgacgtcggagggactgcgggcgtactcgggcggcgacgcgtcctcgttgagcatc
gacggtggagaaagcggcgacggcggcgacgacgacgaggcgaggttggagaagaaacag
aaattgctgacgcgggcgatgtattcgtgcgcgtatccggagctcgggctttcggatgaa
cagctggcgtcgatgcgggcgacgccgagcggaaacgagtgggtgcggaaacgcgagtcc
atgtgggtggatgccttggtgagtctgtacgggttgctcaaagtgaggcaatgctatgcg
ttttacgtcgtctatcgcgagcggagcatcttgttctgcgcgccgggcgtgggaggggtg
acggatggcggatacgccgtggtgacgaatagcaacgcgaagattcgagcggcattgaag
gacgcggcggtagatttcacgagcgcggacgaagaggcgctggcgatcggcaaagcgaaa
actgtgtgggcacagaaatggcgacccgaggacgagacgcaagggttgctagacaacctg
gccggcgacgacgcgagccgagcggaaatcacggcgcatttggccaagatggataaccca
agcaacgctcgtcgccgagccgcggatacgatcatatgccgcggcgcgatcgcggtgaat
ggactgttgaacgttctagtcgaagcctccgggggtgatcccggaagttccgacggcgcg
cagcacgacgtaccgatattgttggcacccgtaccgttcgcgcacagctcgatgaaacct
ttggagctcaaggcacaaacgaacacgatgttgtctcgcaaagacggcaagaatgcaaac
gcactgtaccaatcatccaacgcgacgtcgatgcaaacggtgtacacggcggagacggat
cgcgacgaactcattccgccgtggacgctcgcgcgcgtttgcgcggcgttggcgctcaac
catgaagacatatctgccacgtgcatgacccacaagcctacgcacggcttgaacgttggc
gtcttagcggcgcgcgatatgtcggattccaacaccaagcatcgcgaagccgtcttggtt
cgcgagtgcgcgtattacgacgaagccgagacgtcgcgcatcatggcgccgccgccgctc
ggttcgtccgtgctctcgcgcatcgagtacgtcaacgggacgtattatatcccttag
DBGET
integrated database retrieval system
