Ostreococcus lucimarinus: OSTLU_14434
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Entry
OSTLU_14434 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OSTLU_14434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_14434
03110 Chaperones and folding catalysts [BR:
olu03110
]
OSTLU_14434
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_14434
Enzymes [BR:
olu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
OSTLU_14434
Spliceosome [BR:
olu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
OSTLU_14434
Complex C
U4/U6.U5 tri-SnRNP related factors
OSTLU_14434
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
OSTLU_14434
Chaperones and folding catalysts [BR:
olu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
OSTLU_14434
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
U-box type E3
OSTLU_14434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
GGACT
Motif
Other DBs
NCBI-GeneID:
5000707
NCBI-ProteinID:
XP_001416835
JGI:
14434
UniProt:
A4RTS6
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All DBs
Position
3:complement(join(72304..72458,72495..73150,73337..73422,73441..74145))
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AA seq
533 aa
AA seq
DB search
MGRNKTAKKDRGYVTASEWAAEGGGGGRDRGADAPFRRLPFHCCAISFLPFKNAVCAPDG
TVMDISNAVPYVMKHKKHPVSGEALAVKDLVRLNWYKNKDGEYECPVLNKTFTDATRICA
VKTTGNVYCTDAIEELCFKTKNWKDLLTDEAFKRSDVVTLQDPLDLKARTLDNFDHVKRG
LDVKGLGKEGQGDDGSINKTQVSEDMRRVLASLGSEEAAKIGARGGSSAAAQAQEAKDAE
ENKKHGIETKPDTVDNSHLLRGPAAMGFTSTTMEAHTKNHRAEEIVWYNPTKKGYVRLHT
NFGDLNIELHCDKTPRTCENFITLAEKGFYDGVKFHRSIKRFMLQGGDPTGTGRGGHCIW
GEKFADEIKGNPHRHDERGVLSMANSGKNTNGSQFFITYNAAPHLDNKHTVFGRVVGGME
TLARIEEVECDAADRPLKTIKITSCTIFTNPYDELREEDDKKERAEAEAKAKAADVKNGT
GQALAKDASALPAAKASDGVGKYVASASTSAPAASAPPPKKAKTGGFGNFDAW
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaacaagacggcgaagaaggaccgagggtacgtcaccgcgagcgagtgggcg
gccgagggcggcggcggtgggagggatcgcggcgcggacgcgccgtttcgacgattgccg
tttcactgctgcgcaatctcgtttctgccgtttaaaaacgcggtgtgcgcgccggatggg
acggtgatggacatctcgaacgcggtgccgtacgtgatgaaacataagaagcaccccgtg
agcggtgaggcgctggcggtgaaggatttggtgcggttgaattggtacaagaataaagac
ggcgagtacgagtgcccggtgctgaataagacgtttacggacgcgacgcggatatgcgcg
gtgaagacgactggaaacgtgtattgcaccgatgcgatcgaagagttgtgctttaagacg
aagaactggaaggatttgttgacggatgaggcgtttaagagaagcgacgtggtgacgctg
caggacccgttggatttgaaggcgcgaacgttggataactttgatcacgtgaaacgcggg
ttagacgtgaagggattggggaaagaaggacaaggagacgatggaagcatcaacaagacg
caggtgagcgaagacatgcgtcgtgtgttggcgtcgctcgggagcgaggaggcggcaaaa
atcggcgcgcgaggcgggagttcggcggcggcgcaggcgcaggaggctaaagatgcggag
gagaataagaagcacgggatcgaaaccaagccagacacagtcgacaacagtcacttgctg
cgaggacccgctgcgatggggttcacgtcgacgacgatggaggcgcacacaaagaaccat
cgcgccgaggaaatcgtgtggtacaatccgacgaagaagggatacgttcgattacacaca
aactttggtgatttgaacatcgagctgcattgcgacaagacgccgagaacgtgcgaaaat
ttcatcacgctcgcagaaaagggattttacgacggagtcaagtttcaccgaagcattaaa
agattcatgcttcagggtggcgatcccacgggcactggaagaggcggacactgcatatgg
ggcgagaagtttgcggatgaaatcaagggcaaccctcatagacacgacgaacgcggcgtg
ttgagcatggcaaacagcggcaagaacacgaatggttcgcaatttttcatcacgtacaat
gctgcgccgcatttggacaacaagcacacggtgttcggacgcgtcgtgggcgggatggaa
actctcgcgcgtatcgaagaggttgaatgcgacgccgccgatcgtcctttgaagacgatt
aaaatcacttcatgcacgattttcaccaatccatacgacgaactgcgcgaagaagacgac
aagaaggaacgcgcagaagcggaagccaaagccaaggcggcagacgtcaagaatggcacc
ggtcaagcgctagcgaaggacgcctcggcattaccagcggctaaagcatccgatggcgtg
ggaaaatacgtcgcctcggcatccacgagtgcgccggctgcgagcgcgccgccgccgaag
aaggcgaagacgggcggtttcggcaactttgatgcgtggtag
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