KEGG   Ostreococcus lucimarinus: OSTLU_14569
Entry
OSTLU_14569       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12590  exosome complex component RRP46
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_14569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_14569
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     OSTLU_14569
SSDB
Motif
Pfam: RNase_PH RNase_PH_C ArenaCapSnatch
Other DBs
NCBI-GeneID: 5001062
NCBI-ProteinID: XP_001416919
JGI: 14569
UniProt: A4RU95
LinkDB
Position
3:complement(353870..354652)
AA seq 260 aa
MAPATALRGDGRSSEMLRRQRLHRHYVAGAHGSAEYAIDGTIVVATVHGPQKVKPWREEV
ERGIVEFELTSASGMTREEERACEARVRGAIEATVVRYDFPRLGLRATARIVSDDGNAEA
ACVNALCCALIDADVAMHGLICANACAILSDGTKVIDPTKREENEARAVVRACALSKYRE
KEEIAIVGCSTTGALTEEEYLESIAFIVDATASVVNFQKKSIARFELEGKFQEDGTKEAK
RAKTASEDTPMEGMENKPIG
NT seq 783 nt   +upstreamnt  +downstreamnt
atggcgcccgcgaccgcgctccggggcgatggacgctcgagcgagatgctgcgaagacaa
cgcttgcaccgacactacgtcgcgggcgcgcacgggagcgcggagtacgccatcgacggt
acgatcgtcgtcgccaccgtgcacgggccgcaaaaagtgaaaccttggcgcgaagaggtc
gagcgcgggatcgtggagtttgaactcacgagcgcgagcgggatgacgagagaggaagaa
agagcgtgcgaagcgcgcgtgcgaggggcgatcgaggcgacggtggtgcggtatgatttt
ccgagactcggcttgcgagcgacggcgcgaatcgtgagcgacgacggtaacgccgaggcg
gcgtgcgtgaacgcgctttgttgcgcgctcatagacgcggatgtggccatgcatgggttg
atatgtgcgaatgcgtgcgcgatattgagcgatgggacgaaggtgatcgacccgacgaag
cgagaggaaaacgaagcgagggcggtggtgcgcgcgtgcgcgctgagcaagtatagagaa
aaggaggaaatcgccatagtcgggtgctccacgaccggtgcgttgactgaggaagagtat
ttagaatctatagcgttcatcgtcgacgccacggcgtcggttgtgaacttccaaaagaag
tcaatagcgcgattcgagctcgaagggaaattccaagaggacggaacaaaggaagcgaag
cgagcgaagacggcgagcgaagacacgccgatggaagggatggaaaacaagcccataggg
tga

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