Ostreococcus lucimarinus: OSTLU_14569
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Entry
OSTLU_14569 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12590
exosome complex component RRP46
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_14569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_14569
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
OSTLU_14569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ArenaCapSnatch
Motif
Other DBs
NCBI-GeneID:
5001062
NCBI-ProteinID:
XP_001416919
JGI:
14569
UniProt:
A4RU95
LinkDB
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Position
3:complement(353870..354652)
Genome browser
AA seq
260 aa
AA seq
DB search
MAPATALRGDGRSSEMLRRQRLHRHYVAGAHGSAEYAIDGTIVVATVHGPQKVKPWREEV
ERGIVEFELTSASGMTREEERACEARVRGAIEATVVRYDFPRLGLRATARIVSDDGNAEA
ACVNALCCALIDADVAMHGLICANACAILSDGTKVIDPTKREENEARAVVRACALSKYRE
KEEIAIVGCSTTGALTEEEYLESIAFIVDATASVVNFQKKSIARFELEGKFQEDGTKEAK
RAKTASEDTPMEGMENKPIG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgcgaccgcgctccggggcgatggacgctcgagcgagatgctgcgaagacaa
cgcttgcaccgacactacgtcgcgggcgcgcacgggagcgcggagtacgccatcgacggt
acgatcgtcgtcgccaccgtgcacgggccgcaaaaagtgaaaccttggcgcgaagaggtc
gagcgcgggatcgtggagtttgaactcacgagcgcgagcgggatgacgagagaggaagaa
agagcgtgcgaagcgcgcgtgcgaggggcgatcgaggcgacggtggtgcggtatgatttt
ccgagactcggcttgcgagcgacggcgcgaatcgtgagcgacgacggtaacgccgaggcg
gcgtgcgtgaacgcgctttgttgcgcgctcatagacgcggatgtggccatgcatgggttg
atatgtgcgaatgcgtgcgcgatattgagcgatgggacgaaggtgatcgacccgacgaag
cgagaggaaaacgaagcgagggcggtggtgcgcgcgtgcgcgctgagcaagtatagagaa
aaggaggaaatcgccatagtcgggtgctccacgaccggtgcgttgactgaggaagagtat
ttagaatctatagcgttcatcgtcgacgccacggcgtcggttgtgaacttccaaaagaag
tcaatagcgcgattcgagctcgaagggaaattccaagaggacggaacaaaggaagcgaag
cgagcgaagacggcgagcgaagacacgccgatggaagggatggaaaacaagcccataggg
tga
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