Ostreococcus lucimarinus: OSTLU_15057
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Entry
OSTLU_15057 CDS
T01029
Name
(RefSeq) predicted protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_15057
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_15057
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OSTLU_15057
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
Helicases
OSTLU_15057
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
OSTLU_15057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
5001167
NCBI-ProteinID:
XP_001417262
JGI:
15057
UniProt:
A4RW46
LinkDB
All DBs
Position
4:join(483693..483806,483961..485725,485855..485940)
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AA seq
654 aa
AA seq
DB search
MGKTKDAKEDKKREKREKRDKKALEAAATTTTKKKRKTEDSDSRETTEKKKKRKKSTSEA
REDVEGEDAIEVGTPEPEEPNPLALDNFALSEPVKATLRKKGFDALFAIQAETLEIALSG
KDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVFA
DFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKFR
VLDEADEMLNMGFVDDVELILKSSGDVQTLLFSATLPPWVKDIAKRFLKPDYATVDLVGD
QKQKASGAVQHMLLPCQWSDRVDLVCDVIRSKAPGGGRVIVFCDTKRDCGELCDNLQKEI
PKGAKALHGDVSQGQREVVLAGFREDKFQVLVATDVAARGLDITGVELVIQCEPPKDAET
YIHRSGRTGRAGATGISVTLCTPRSEWAVPNIERKGGFKFVRIGPPQPAEMAKAAGKIAG
EQIRKVHKGAAKLFMDVARDLLEGEDSDSEEGRDPVEVLAMAIAKLAGHGELRQRSLLTS
HSGQTTLLFTAGETQIRTPTYVWNFLRQRMDENDLQLRRLTLSVDNMAAVFDVPSELADK
FCALSEPASSGKSAVSITACEELPELRGRFGGRGRGSPGGRFGGRGGGRGRGRY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaccaaggacgccaaggaggacaagaagcgcgagaagcgcgagaagcgggac
aagaaggcgctcgaggcggcggcgacgacgacgacgaagaagaagcggaagacggaggat
tcggattcgcgggagacgacggagaagaagaagaagaggaagaagtcgacgagcgaggcg
agggaggacgtcgagggtgaagatgcgatcgaggtggggacgcccgagcccgaagagccg
aacccgttggcgctggataatttcgcgctgagcgagccggtgaaggcgacgctgcggaag
aagggattcgacgcgctcttcgccattcaagccgagacgctggagatcgcgctgagtggt
aaggacgtggtcggacgcgcgcgcacggggtgtgggaagacgttggcgttcgttttgccg
atcgtcgaggagatggcgaagatttcgcccatgccggcgaacgggcgccgcgtacaaggt
cgtcggccgatgtgcgtggtgctggcgccgacgcgcgaactcgcgaaacaggtgttcgcc
gactttgactggataggaaactcgttcgggtttaagtccgtctgtgtgtacggtgggacg
ccgtatcgcgagcaagagatgggtttgcgcggcgggtgcgacgtcgtcatcggtactccc
ggacgcatgaaggatcatttggagcgcaagacgttgatgatggacaagctcaaattcagg
gtgctcgatgaagccgacgagatgttgaacatgggattcgtggacgacgtcgagttgatc
ttgaagagctccggagacgttcagacactgcttttctcggccaccttgcccccgtgggtg
aaggacatcgcgaaacgtttcttgaagccagactacgccacggttgatctggtcggcgac
caaaagcaaaaggcgagcggggccgtccagcacatgctattaccttgtcaatggagcgat
cgtgtcgacctcgtctgcgacgtcattcgttccaaggccccgggcggcggacgcgtcatc
gtgttctgcgataccaagcgcgactgcggcgagctctgcgacaacttgcaaaaggaaatc
ccgaagggtgcgaaggcgcttcacggcgacgtcagccaaggtcagcgcgaagtcgtcttg
gctggttttcgagaagataagttccaagtcttggtcgccaccgacgtggcggcgcgaggt
ttagacatcaccggcgtcgagctcgtgattcagtgcgaaccgccgaaggacgccgagacg
tacattcaccgctcgggtcgcacgggacgcgctggggccactggcattagtgtcacgctg
tgcacgccgcgttccgaatgggccgtaccgaacatcgaacgaaaaggcggattcaagttt
gttcgcatcggaccgccgcaaccggcggagatggcaaaggcggcgggaaaaattgcggga
gagcaaatccgcaaggtgcacaagggcgccgcaaagctcttcatggacgtcgcccgagac
ttactcgagggcgaagatagcgatagtgaggaaggtcgcgatccggttgaggtgctcgcc
atggcgatcgccaagctcgccggccacggcgagctgagacaacggtcgttgttgacttct
cactcgggccagacgacgctgttgttcaccgcgggcgagacgcaaatcagaacgccgacg
tacgtgtggaacttcttgcgtcaacgcatggacgaaaacgatttgcagcttcgtcgctta
acattgagcgtggacaatatggctgcggtcttcgacgtgccctctgagctcgccgataag
ttttgcgccttgtccgaacccgcatcgagcggcaagtctgccgtgtccatcaccgcgtgt
gaagaattaccagagctgagaggaaggtttggcgggcgaggacgagggtcgccgggaggt
cgtttcggcggtagaggcggcggaagaggtcgaggacgctattag
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