Ostreococcus lucimarinus: OSTLU_16259
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Entry
OSTLU_16259 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSTLU_16259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_16259
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OSTLU_16259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D3
Nrap
Nrap_D5
Nrap_D4
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
5002794
NCBI-ProteinID:
XP_001419006
JGI:
16259
UniProt:
A4S0N1
LinkDB
All DBs
Position
7:complement(670513..673335)
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AA seq
940 aa
AA seq
DB search
MNGDGGVVVDVAVEMPRSFFQEKDYLDHRYHFKRAVYLDVLHKKLSKSSEWSCEVMDQHR
DARKPYITVHFGEKQNKKALRLFLTIDPETFASVRLLPNRANVRRLARGDVRPASPHYNQ
SIAEDMYARMHAQFFAAASKKAKSLPGAVVLFKRWAQGRRLLDAADGVSGFFISMLFAYM
LERGGQLSSSMDTSQMFRAAINALAKPGFFKKGLYASGKPAEAGEWQRAFANVFLGPCGH
VNIMARMSASAVQELIHEAILSASELKRSSHSAFSNVLLGQCPAAVRYDLHMHVDVMVNA
DEGECDLGGRRTAESDVARIVTRALSDRAKLVRAFEPQSSSVDTVGSASCKIWVGVILDP
EHALRLVDIGPSSADDKEAKEFRKFWGERSELRRFKDGRICESVVWDFVPPTNRHHIPAI
VAEQALKLNLANVDEIEWSSKMFDEPLSKIASSKEGTSPASLLQTLDRLAKRMKDLKEMP
LKVNNVQPLSGAFRGTDPFPPTPHPLAHGAGVGLGKSEDDIAVCPKTLDIMVSLEGSGRW
PEDPDAIAKTRSMMAIQLAESLRKSYAMPSVIAEEAIDILFEGYAFRIHVNASAGGPHVK
ATEGKLIERASHAGLIASIAARFPMYGLSTQLINRWVSSHMFSPHLSDEAIEALVALLFV
NPGAALPPMSREVAFLRFLNLFASHIWFDPVVLDPEGIVSDAEIESIDRTAKTAPAMCIV
TPHDRSGIRLTQSGPGAVVLKRLVSIAARAQSEMQAVLEGVSKHSMFETECWERFFKPSL
SGFDAAFVLRRTALPFPKHALFPSKRLYKRMRAQFENEMSVVDEDEEETLAQSIKLAKLP
PKLLNKGPDKAREALLIGFDPTECFIKDAEDRVGGTALMFVDKYGGDVVGVAFKPNAVHA
DAALPDSLSWLPNPDPPAREDVIEEIATIAGADFVEKVLT
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgacggaggggtcgtcgtggacgtcgcggtagaaatgcctcggtcgttcttt
caagaaaaggattatttagatcacaggtatcacttcaagcgagcggtgtacctggacgtg
ttgcataaaaagttgtcgaagtcgtccgagtggtcgtgcgaagtgatggaccagcaccgc
gatgcaaggaagccgtatatcacggtacactttggagaaaagcaaaataaaaaagcactt
cgtttgtttttgacgatagaccccgaaactttcgcatcggttcgattgttgcctaacaga
gcaaacgtgcgaaggctggcacggggagacgtgcggccggcgagcccgcattacaaccag
tccatcgcggaagacatgtatgcacgcatgcatgcacagttctttgccgcagcatcgaag
aaagcgaagagtttgcccggtgcggtggtgctattcaagcgatgggcgcagggaaggcgg
ttgctggacgcagcggatggcgtcagtggatttttcatttcgatgctcttcgcatacatg
ctagagcgaggtggtcaattgagtagtagtatggacactagccagatgtttcgggccgcg
attaacgcgctcgctaagcctggcttctttaagaagggtttgtacgcaagcggtaaaccc
gcagaagcgggcgagtggcagcgcgctttcgcaaacgttttccttggaccttgtggacat
gtgaatattatggcgagaatgtctgcgagcgcggtgcaggagctaattcacgaggcgata
ctttcagcgtctgagttgaagagatctagtcattccgcgtttagcaacgtgttacttggc
caatgtcccgccgcggttcggtacgatttgcatatgcacgtcgacgtgatggttaatgca
gatgaaggcgaatgtgacttgggtgggcgtcgtaccgcagaatcagacgtagcacgtatt
gttactcgcgctttgagcgatcgtgcaaaactcgttcgtgcgtttgagccgcaaagttcg
agcgtcgacaccgtcgggagtgcatcgtgcaagatatgggttggggtaattttggatcct
gaacacgcgttgcgactggtcgacatcggtccgagttcggctgatgacaaagaagctaaa
gaatttcgcaagttttggggcgaacggtccgagctccgtcgcttcaaggatggacgaatc
tgtgaatcggtggtgtgggattttgttccgccgacgaatcgacatcacataccagctatt
gtcgccgaacaagcgctgaagctcaacctggcaaacgtcgatgagatagaatggagctca
aagatgttcgacgagcctctgagcaagattgccagctcgaaagaaggtacttctccggcg
agtttgcttcagacgttggatcgcttggcgaaacgaatgaaggatttgaaagaaatgccc
ctcaaagtgaacaacgtccagcctttgagcggagcatttcgtggaaccgatccatttccg
ccgacgccgcatccactagcacacggtgcgggcgttggcttgggaaagagcgaagacgac
attgctgtatgtcccaaaactcttgacatcatggtgtccctcgagggcagcggtcgatgg
ccagaggaccccgacgcgatcgcaaagacgcgatcgatgatggccatacagctcgcagag
tctcttcgaaagagttacgcgatgccaagtgtcatcgctgaagaggcgattgacattttg
tttgaaggatacgcttttcgcattcacgtaaatgcctctgccggtggtccgcacgtcaag
gcgacggagggaaaactcatcgagagagcatctcacgctggattgattgcatcaattgct
gcaagatttccgatgtatggcctttcgacgcagctcatcaatcgttgggtctcgtcgcac
atgttttcgccacacctttctgacgaagcgatcgaggccctcgtggcgttgttgttcgtc
aacccaggcgcagctttgcctccgatgtcccgcgaggtggcatttttgcgcttcttgaat
ctatttgcgtcgcacatttggttcgatccggtagtattagatcccgaaggtatcgtgagc
gacgccgagattgagagcatcgacagaacggcgaaaacagcgccagcaatgtgcatagtc
acgccgcacgataggagcgggattcggctcacacaaagtgggccaggcgcagtcgttctg
aaacgactcgtttccatcgcagctcgagcgcagtcggagatgcaagccgtgctcgaaggc
gtgtcgaagcactctatgtttgagacggagtgctgggagcgcttcttcaaaccgtctctc
agtggattcgatgccgcttttgttctacgtcgaaccgcgctgccgttcccaaaacatgcg
ttgttccctagcaagcgcttgtacaagcgaatgcgagcgcagttcgagaacgaaatgagc
gtcgtagatgaggacgaggaagaaaccttggcgcaaagcatcaagctcgcgaaacttccg
cccaagcttttgaacaaaggtccggacaaggcgcgagaggcgttactcataggattcgac
ccgaccgaatgtttcattaaggatgccgaagatcgagtcggtggcactgcgctgatgttt
gtggataaatacggaggcgacgtcgtcggcgtcgcgttcaagccaaacgccgtccacgcg
gacgcggcgcttcccgactctttgtcttggttacccaaccccgatccccccgcgcgagag
gatgtcatcgaagaaatcgccaccatcgccggcgccgacttcgtggaaaaggttctcacg
tga
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