Ostreococcus lucimarinus: OSTLU_16311
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Entry
OSTLU_16311 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OSTLU_16311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_16311
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
OSTLU_16311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-GeneID:
5002739
NCBI-ProteinID:
XP_001419039
JGI:
16311
UniProt:
A4S0U7
LinkDB
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Position
7:complement(776503..778425)
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AA seq
640 aa
AA seq
DB search
MSARDHAVMFVVDVSALDRCVVACAGDDEDEARRNGHVATTSARAIVASCIRGCVNAKTQ
LRTPSQRDHCFGLTLFGARDTSNDVAAAALDDDGEGDEYAGIVTARQLRPPESKTGLEYE
RDILETAAAVDGAADVPEALAVACDSLIRQYSPEGVNAATKKRLAGCVKDIVLITDATGA
ATMQSAVDDEFVATLLDGMKAQNVRLKVGVVDACEMSRARGDAGVRVTASATFREPDFEA
LRQACDVLAAADAGNDSAVVGASALLLDLQIKRVRPTSGYRGFLSFGFNAGVNVALYKLN
TEAVPVKLNRYSEELADRPEESHQTLVETTYRNVNDLDGEFVPPERHVKAFRYGKQHIPI
DAETESRLSMRFEKSMKVIGSISMDECPLWLSVGEPSVCVPQPSTKTTGLSQERAAADAT
ALSALARALDDAKLALLVRGAFTEGTTSIHIGALTPRLTDAGDFLLYTPLPFKEDYNEYS
LPSVPASARVDAEDPRLVDAREFVRANSLDGDRRATTMPWESLNPTLRAYRDLFEARALG
AQASLKRRPSLALGVAEASACDFAARFGLNAAQDRSARPRLAADEGAAKAPSPLRVSASL
PERPQSQPSFAVLVDVVKTEDGEEEALVSPPDLDVFDDME
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcgcgatcatgcggtgatgttcgtcgtcgacgtctccgcgctcgatcgctgc
gtcgtcgcgtgcgcgggcgacgacgaagacgaagcgcgtcgaaacgggcacgtcgcgacg
acgtctgcacgagccatcgtcgcgtcttgtattcgcgggtgcgttaacgcgaaaacgcag
ctacgtacgccatcgcaacgcgaccattgtttcgggttgacgctcttcggcgcgcgagac
acgtcgaacgatgttgcggcggcggcgctcgacgacgacggtgagggcgacgaatacgcc
ggcatcgtcacggcgcgacagctgcgaccgccggagagcaagacggggttggagtacgag
agggatattttagagacggcggcggcggttgacggcgccgcggacgttcctgaggcgctc
gccgtagcgtgtgattcgctcatacgccagtactcgccggaaggcgtcaacgcggcgacg
aagaagcgattggctggttgcgtgaaggatattgttttgatcaccgatgccacgggcgcg
gcgacgatgcaaagtgcggtagatgacgagtttgtggcgacgctattagatggtatgaaa
gcgcaaaacgttcgattaaaagtcggcgtcgtcgacgcgtgcgagatgtctcgagcgcgc
ggcgacgcaggcgttcgcgtgactgcgtcggcaacgtttcgcgaaccggatttcgaggct
ttgcgtcaggcgtgcgatgttctcgccgctgccgacgccggtaacgatagcgccgtcgtc
ggcgcgagcgcgcttcttttagatttgcagattaagcgcgtgcgaccgacgtctggctat
cgcggttttctatccttcggtttcaacgcgggtgtgaacgtggcgctttacaagctgaac
acggaagcggtgccggtgaagctcaatagatacagcgaggagctcgcggatcgtccggag
gagtcgcatcagacgcttgtggagactacgtacaggaatgtcaacgatcttgacggcgaa
ttcgtgccgccagagcgccacgtgaaggcgtttcggtacggcaagcagcacataccgatt
gatgccgagaccgaaagccgcttgtcgatgcgattcgaaaagagcatgaaagtaatcggt
tcaatcagcatggatgaatgcccgttgtggctcagcgttggcgagccatcggtgtgcgta
ccgcagccgagtacgaagacgactggtttgagccaagagcgcgcggcggcggacgcgacg
gcacttagcgcgctcgcaagggctctggatgacgcaaagcttgcgctactcgttcgcggc
gcgttcacggaaggcacgacttcaatccacatcggcgcccttacgccgcggctcacggat
gcaggagactttttgctctacacgccgttgccgttcaaagaagactacaacgagtactct
ttaccgtcggtcccggcgagcgcacgcgtcgatgcggaggacccgcgcttggtcgacgct
cgcgaattcgtcagggcgaactctctcgacggcgatcgacgcgcgacgacgatgccctgg
gagtcgctcaatccgactttgcgcgcatatcgagacttgttcgaggcgcgagcgctcggc
gcgcaagcgtctctaaaaaggagaccatctttagcgctaggagtcgccgaagcctcggcg
tgcgatttcgccgcgcgattcggtctgaacgcagcgcaagacagaagtgcacgaccacga
ttggcggccgacgagggcgcggctaaggctccctcgccgctacgcgtctccgcatcgctt
cccgaacgtccacagtcccagccttcgtttgccgtgttggtggacgtcgtcaagacggag
gacggggaagaagaggccttggtgagcccgcccgatttagacgtgttcgacgatatggaa
tag
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