Ostreococcus lucimarinus: OSTLU_16586
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Entry
OSTLU_16586 CDS
T01029
Symbol
CHR3511
Name
(RefSeq) predicted protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OSTLU_16586 (CHR3511)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_16586 (CHR3511)
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
OSTLU_16586 (CHR3511)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
BSP_II
Motif
Other DBs
NCBI-GeneID:
5003492
NCBI-ProteinID:
XP_001419229
JGI:
16586
UniProt:
A4S1Y4
LinkDB
All DBs
Position
8:join(647384..647654,647825..650505)
Genome browser
AA seq
983 aa
AA seq
DB search
MRSSDDDDDDDDDEEEDEGDESYEARDGDDDDDDVVVTQRDVKAANIASLVNGTLETCAR
PYVRGLTVEDPAVTLKRAFKSPFPNAPNRSAELERRLASRRVFVPWGSKASDVARALPKP
TQCAATEEAIVLPEGIEDLVLWEPDREGDGGETSATAGGASAKPIVVDRMLTRWLRPHQR
EGVKFMFECVMGLRDFEGQGCILADDMGLGKTLQGITLLWTLLKQGIDGTPAVKRALIVC
PTSLVSNWDDECNKWLNGRVKTLPICDSTRAEVVSSVKQFLAPRHLAQVMIVSYETFRIH
SDRFNFDGAVDLIMCDEAHRLKNGETLTNKALCSVPCLRRVMLSGTPMQNHLDEFYSMVG
FCNPGLLGTPPEFAKKFERPILAGREPDATEKELERAQEANSELSDLVNKFILRRTNTIL
SKHLPPKVVEVVCCKLSPLQQALYEHFLTSKAANQALTGKATAVLPAITALKKLCNHPKL
IYDMINGAKNTGQAASGFSTCAEFFTPGMYDGGGGRSGRGGGGMMHGWEEHSGKFAVLAR
LLANLRAETKDRIVIISNYTQTLDLVGNMCRERNYPFVRLDGSTSIGKRQKLVKQFNDPT
SNSFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWRDGQKKKCYLYRFLA
AGTIEEKVFQRQLSKESLQNVVNGSGELEQSVMSKDELRKLFSLDCTTYSDTHDTCGCKR
CPARNGDDLGCDPDAEYKEWEEQIDDADEQKLDEWAHHHRMDKVPDDMMKKSAGEDVSFV
FSLKVEGAAIDESKKAPAPEKKSEEASEKKPTPTMPSHSTRPPTRFVPPARRPLAPRVAP
QATAMPAYQRPSTLIAAKPSEGRVPPMRAAVKPAAKAPKKKKKLESESEDEDTEEESEQE
ESEAEEESEEDEPVADTEGDDDDEVPDSEDEDVADTSAPRQKRSSPDADESATRYKAARL
SSLTSDRGFAVPPRSPSDESDGY
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgagcgacgacgacgacgacgacgacgacgacgaagaagaagacgaaggagac
gaatcatacgaggcgcgcgatggcgacgacgacgacgacgacgtcgtcgtgacgcaacgg
gacgtgaaagcggcgaacatcgcgtcgctcgtgaacgggacgttggagacgtgcgcgcga
ccgtacgtgcggggactgacggtggaggacccggcggtgacgctgaaacgggcgtttaaa
tcgccgtttccgaacgcgccgaatcggagcgcggaattggagcgacggttggcgagtcga
cgggtgttcgtgccgtgggggtcgaaggcgagcgacgtcgcgagggcgttgccgaagccg
acgcagtgcgcggcgacggaggaggcgatcgtattgccggaagggatcgaggatttagtg
ctttgggagccggatcgcgagggtgatggtggagagacgagcgcgacggccggtggggcg
agcgcgaaaccgatcgtggtcgatcgcatgctcacgagatggttgcgaccgcaccaacgc
gagggggtcaagtttatgtttgagtgcgtcatgggtttgcgcgatttcgaaggccaaggg
tgcattctcgcggatgacatgggtttaggtaagacattacaagggatcacgctgctctgg
acgctcttgaagcaaggtatcgatggtacgcccgcggtgaagcgcgcgttaatcgtctgt
ccgacgtcgctggtgtccaactgggacgacgagtgcaacaagtggttgaatgggcgcgtg
aaaacgttgcccatttgcgactccactcgcgctgaagtcgtgagctcggtgaagcaattt
ctcgccccgcgacatctcgcgcaagtcatgattgtgagctacgaaacgtttaggatccac
tcggaccgtttcaactttgacggcgcggtggatttgatcatgtgcgacgaagcgcatcgc
ctgaaaaacggcgagacgctgacgaacaaggcgttgtgttcggtaccgtgcttgcgaaga
gtgatgctgagcgggacacccatgcaaaatcacttggatgagttttactcgatggttggc
ttttgcaatcccggcttgctcggcacccctcccgagttcgcgaagaagtttgagcgaccc
atcttggctggacgcgaaccagacgcgacggaaaaggaactcgaacgcgcgcaagaggcg
aatagcgagctctctgatctcgtcaacaagtttatcttgcgtcgcacgaacacgattttg
agtaagcaccttccgccgaaagtcgtggaagtcgtgtgctgtaagctttcgccgcttcag
caggcgctgtacgagcactttctcacgtcaaaggcggcgaatcaggcgttgactggaaag
gcgacggccgtgttacccgcaatcacggcgttaaagaagttgtgcaatcacccgaaattg
atttacgacatgattaatggcgcaaagaacactggtcaagcggcgagcggattcagcacg
tgcgcggaattttttactcccggaatgtacgacggcggcggggggcggagtggtcgcggt
ggcggtggcatgatgcacggctgggaagagcacagtggaaagtttgctgtactcgcgcgt
cttctcgctaatttgcgcgccgagactaaggaccgtatcgtcatcatttccaattacacg
caaactctcgacttggtgggcaacatgtgccgcgagcgaaactacccgttcgtgcgcctc
gacggctcgacgtctatcggaaagcgtcaaaagctcgtcaaacagttcaatgatcccacg
agtaattcttttgtgtttctcttgtcttccaaggctggcggatgcggtatcaacctcatc
ggaggtaatcgtctcgtgttattcgatcccgactggaatcccgccaacgacaagcaagcc
gccgcgcggtgctggcgcgacggtcaaaagaagaagtgctacttgtatcgctttttggcc
gcgggcacgatcgaggagaaagttttccagcgtcaactgtccaaggaaagcttgcaaaac
gtcgtcaacggttcgggggaactcgaacaatccgtcatgtccaaggacgagttgcgaaag
ttgttttcgttggactgcacgacgtactcggatacgcacgacacgtgcggttgcaagcga
tgccccgcgcggaacggtgacgacctcgggtgcgacccggacgcggaatacaaggaatgg
gaggaacaaatcgacgacgcagacgaacaaaagctcgacgagtgggcgcaccatcaccgc
atggacaaagttcccgacgatatgatgaaaaagtcggcgggcgaggacgtatccttcgtg
ttttcgctcaaagttgagggcgcggctattgatgaatcgaagaaagctccagcacccgaa
aagaagtcggaggaagcgtctgagaagaagccgacgccgacgatgccgtcgcactcgacg
cgcccaccgaccagattcgtgccgccggcgcgacgtccgctcgcgccgcgagttgcgccg
caggcgacggcgatgccggcgtatcaacgaccgagtactctgatcgctgcgaagccatcg
gaaggtcgcgtgccgcccatgcgcgcagctgtgaaacctgccgcgaaagcgcccaagaag
aagaagaaacttgagagcgaatccgaagacgaagacaccgaggaagaatccgaacaggaa
gaatctgaagccgaggaagaatctgaagaagatgagccagtcgctgatacggaaggggac
gacgatgatgaagtaccagattctgaagatgaagacgtcgccgacacctctgcgccgcgt
caaaagcgatcatcaccggacgcggatgaaagcgcgacgcgatacaaggcggcgcgcctg
tcgtccttaacgtcagatcgaggctttgcggtgccgccgcgctcgcccagcgacgaatcc
gacggatactag
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