KEGG   Ostreococcus lucimarinus: OSTLU_16977
Entry
OSTLU_16977       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K13174  THO complex subunit 5
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OSTLU_16977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_16977
   03041 Spliceosome [BR:olu03041]
    OSTLU_16977
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     OSTLU_16977
Spliceosome [BR:olu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    OSTLU_16977
SSDB
Motif
Pfam: FmiP_Thoc5 Sec10_N DUF6190 Phasin_2
Other DBs
NCBI-GeneID: 5004214
NCBI-ProteinID: XP_001420073
JGI: 16977
UniProt: A4S3D2
LinkDB
Position
10:complement(93943..95352)
AA seq 469 aa
MPPRKRAASAPSEPTSPVAAHRTTTSLDVPSRVGAPSPAPNAEDATPESTEAQFELIQEL
TQELRENVAQLVEEGTKTSDARKPTVETCMKTLASVRTAQRRALMGLEYLKAGTRRRDKE
TDPARVRAATVAYETAWRESALKRHADAEGSGGGVSAGGIELMELKEYEADAKRRGLPTK
KPRDEYELMTRRLAHELIVRREMVEEQNALKAELAALQQQVAEKKKLLGGSLEATMTNVR
KSAEPLRRMFDLAYASTEDLDARIGLLPVPLHVLYAQLKHLQQNEEEIKVELVGRIDDAQ
NFKQKKASEEEGELVDEGAENNRRSKKRKARGGRQAASASSSLYEEHPLRVEVGFGATKV
FFTYLTKLHVVVVSSKPEDEKFLGELFPDDDGSEMPNHAVAVVAPNFTFDASCAPSNAKP
YKWAQNLAGLSFLPPFPAPIPDTIDAGKVSAKANAEEVVRAIREKLDAR
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgccgccgcgcaagcgcgccgcgagcgcaccgagcgaaccaacctcccccgtcgccgcc
catcgcacgacgacgtctctcgacgtcccttcgcgcgtcggcgcgccctcgcccgcgccc
aacgccgaggatgcgacgcccgagagcaccgaagcacagtttgagctgattcaagagctc
acgcaagaattgcgcgaaaacgtcgcgcagctcgtcgaagagggaacgaagacgagcgat
gcgcgtaaacctaccgtagagacgtgcatgaagacgctcgcgagcgtgcgaacggcgcag
aggcgagcgttgatgggactggaatacctcaaggcggggacgcggcggcgggacaaggaa
acggacccggcgcgagtgcgcgcggcgacggtggcgtacgagacagcgtggcgagagagc
gcgctgaagcgacacgcggatgcagagggaagtggtgggggagtgagcgcgggagggatc
gagttgatggaattgaaggagtacgaggcggacgccaagagacgcggtttgccgacgaag
aagccgcgggacgaatacgaactgatgacgcgacggttagcgcacgagctcatcgtgcgg
agggagatggtagaggaacaaaacgcgttgaaagcggagttagcggcgttacaacaacag
gtagcggagaagaagaagctgttgggggggagtttagaggcgacgatgacgaatgtgcgc
aaatctgccgaaccgttgaggcgaatgtttgatctcgcgtacgcgagcacggaagatctc
gacgcgcggatcggactacttccagtgccgttgcacgtgctgtacgcgcagttgaagcac
ttgcagcagaacgaagaggaaatcaaagtcgaactggtggggagaatcgacgacgcgcaa
aatttcaagcagaaaaaggcaagcgaagaggagggcgaactcgtggacgaaggtgctgag
aataatcgtagaagcaaaaagcggaaagcgaggggcgggcggcaagcggcgagtgcgtcg
tcgtcgttatatgaggaacatccactccgagtcgaggtcggctttggtgctacgaaagtt
ttcttcacctatctcacgaaattacacgtcgtcgtcgtgtcatcgaaaccggaagatgag
aaatttctcggagaattgtttccagatgacgacgggtctgagatgccgaatcacgccgtc
gccgtggtggcacccaattttacgtttgacgcttcgtgcgcgccatccaacgccaagccg
tacaagtgggcacaaaatttagccggtttgagtttccttccgccgtttcccgccccaatt
ccggatacaatcgatgctgggaaagtgtccgcgaaggcgaatgcggaagaggtcgtgcgc
gcgattcgtgaaaagctagacgctcgatga

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