Ostreococcus lucimarinus: OSTLU_16977
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Entry
OSTLU_16977 CDS
T01029
Name
(RefSeq) predicted protein
KO
K13174
THO complex subunit 5
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_16977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_16977
03041 Spliceosome [BR:
olu03041
]
OSTLU_16977
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
OSTLU_16977
Spliceosome [BR:
olu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
OSTLU_16977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Sec10_N
DUF6190
Phasin_2
Motif
Other DBs
NCBI-GeneID:
5004214
NCBI-ProteinID:
XP_001420073
JGI:
16977
UniProt:
A4S3D2
LinkDB
All DBs
Position
10:complement(93943..95352)
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AA seq
469 aa
AA seq
DB search
MPPRKRAASAPSEPTSPVAAHRTTTSLDVPSRVGAPSPAPNAEDATPESTEAQFELIQEL
TQELRENVAQLVEEGTKTSDARKPTVETCMKTLASVRTAQRRALMGLEYLKAGTRRRDKE
TDPARVRAATVAYETAWRESALKRHADAEGSGGGVSAGGIELMELKEYEADAKRRGLPTK
KPRDEYELMTRRLAHELIVRREMVEEQNALKAELAALQQQVAEKKKLLGGSLEATMTNVR
KSAEPLRRMFDLAYASTEDLDARIGLLPVPLHVLYAQLKHLQQNEEEIKVELVGRIDDAQ
NFKQKKASEEEGELVDEGAENNRRSKKRKARGGRQAASASSSLYEEHPLRVEVGFGATKV
FFTYLTKLHVVVVSSKPEDEKFLGELFPDDDGSEMPNHAVAVVAPNFTFDASCAPSNAKP
YKWAQNLAGLSFLPPFPAPIPDTIDAGKVSAKANAEEVVRAIREKLDAR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgcaagcgcgccgcgagcgcaccgagcgaaccaacctcccccgtcgccgcc
catcgcacgacgacgtctctcgacgtcccttcgcgcgtcggcgcgccctcgcccgcgccc
aacgccgaggatgcgacgcccgagagcaccgaagcacagtttgagctgattcaagagctc
acgcaagaattgcgcgaaaacgtcgcgcagctcgtcgaagagggaacgaagacgagcgat
gcgcgtaaacctaccgtagagacgtgcatgaagacgctcgcgagcgtgcgaacggcgcag
aggcgagcgttgatgggactggaatacctcaaggcggggacgcggcggcgggacaaggaa
acggacccggcgcgagtgcgcgcggcgacggtggcgtacgagacagcgtggcgagagagc
gcgctgaagcgacacgcggatgcagagggaagtggtgggggagtgagcgcgggagggatc
gagttgatggaattgaaggagtacgaggcggacgccaagagacgcggtttgccgacgaag
aagccgcgggacgaatacgaactgatgacgcgacggttagcgcacgagctcatcgtgcgg
agggagatggtagaggaacaaaacgcgttgaaagcggagttagcggcgttacaacaacag
gtagcggagaagaagaagctgttgggggggagtttagaggcgacgatgacgaatgtgcgc
aaatctgccgaaccgttgaggcgaatgtttgatctcgcgtacgcgagcacggaagatctc
gacgcgcggatcggactacttccagtgccgttgcacgtgctgtacgcgcagttgaagcac
ttgcagcagaacgaagaggaaatcaaagtcgaactggtggggagaatcgacgacgcgcaa
aatttcaagcagaaaaaggcaagcgaagaggagggcgaactcgtggacgaaggtgctgag
aataatcgtagaagcaaaaagcggaaagcgaggggcgggcggcaagcggcgagtgcgtcg
tcgtcgttatatgaggaacatccactccgagtcgaggtcggctttggtgctacgaaagtt
ttcttcacctatctcacgaaattacacgtcgtcgtcgtgtcatcgaaaccggaagatgag
aaatttctcggagaattgtttccagatgacgacgggtctgagatgccgaatcacgccgtc
gccgtggtggcacccaattttacgtttgacgcttcgtgcgcgccatccaacgccaagccg
tacaagtgggcacaaaatttagccggtttgagtttccttccgccgtttcccgccccaatt
ccggatacaatcgatgctgggaaagtgtccgcgaaggcgaatgcggaagaggtcgtgcgc
gcgattcgtgaaaagctagacgctcgatga
DBGET
integrated database retrieval system