Ostreococcus lucimarinus: OSTLU_17095
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Entry
OSTLU_17095 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14312
nuclear pore complex protein Nup155
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_17095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_17095
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OSTLU_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
5004162
NCBI-ProteinID:
XP_001419980
JGI:
17095
UniProt:
A4S3U2
LinkDB
All DBs
Position
10:join(363789..366197,366396..366833,367043..368482)
Genome browser
AA seq
1428 aa
AA seq
DB search
MRTRDRDADAREAMETAAKTVSKLAADAEQADLVELLREAPREAYSFQNAGWPSDVVGMK
KEELPGVVLERYNTRQSVCFCGVLPEISRAWASVDNALFLWRLDVADDVPVEYSGEEQAI
VAVGLVKPKSGVFLEAISYVLVIATTVELVMVGVCLEDDGRELTLHPLQYSCPTDATIMN
DITSTPEGRIFLAGADEALYELVYAQSDTWHSKRCKKVRHSQNLSSLLPSVLRLKGSDAL
KQVVVDAKRGILYTRSEQGVVVVYDVGAAAKDAPRKVAEVKNVAQLAAQARGQGSLFASA
TSSVKKGAKLVHVALVHPEESSVVTLVAICADGRRIYLTALPPSRGYSYGVASGTGSSRQ
GPSRLSVVEQRDPPPQGGNQRGMTTAQALLNTTSRALEIEAGFYSSGVLLLSDATPNDSD
ARLILSNRDLALPPHLQLPPPTPPPSSGSGTRGLREVVTLEQLEGRCASSLGSLGEIPMP
KSVQDAIDPPYPTGTLPEARVKSTGLLSELVTQYMCPRRTFVLMTNAGLVRFEKARPIDT
LRSVLEKNIPEQIEEFFKSYGPIEAAAMCVALSVSGSESNAVILAAKRAFDDPRLTGEPS
IVEDSYAQNQENNGGSFNMGRAIVQPVLTFSSAQRGLYLFTARIMSSTWERAIIVPVRAP
VQTNLNGNSRPLSPAMKIANKALGAVQAAARYMSEEPALRCSLDPTLLKNLHDRLMPLVT
FLKQRRPRISSGATMSQTKRRRVRSSGSELTALQEEERSLSALSALVSRTAQALSLIRII
ITDERFSRVADMLPSAIRKELSQLTLKKLVSTTHGARLAGALIEAMMSHIMSHARHSAEE
LAAELQKGCPDFFGADSRTFYHARDLLQLARDARARKENVLRDQYVNDAIALFMKVPTSG
DLSAVCAELVDLRAFHGVTAVPLAAAAALEARAEEARFTMHSQPNVDMVDLQSCFEVTCT
TIRALATGRADADAEPGSLSRVAAEELPEDIRERGLVKILEQLQRVSGADSQDFMHRVFA
ELIAVRRDAMLLSLPAAMLEPYLVNKSALTSAQQGGALTPDEARHLDLLAQLYAARSLFG
LAAQVDCSLAERRCANDETFSLDQRMALFERALMHARKSVDGGLTNGLDTSFCENVDSKI
KLLDMQRRVLGVCIERSRQARATGSSNAPEEAFVYELERELKQLSDLYNDFAKPCELWDI
CLEMVHFSQYHDPDGEIVCDLWDKLLLQAASRAPSAATCLREACLVVRALGVKLFPSDVA
FPVIHVALRLELMAAGLWGVPDVAVEAHVDDEYDTSEVADALVVACKGLAEPVQRAYDRL
LATPAQRMHDKRLSKVDALQTPRLRLRLLRSVYFVLQLWDQSLVPKATAYGEPRAYATGG
HVRAAIGDLCVSYASESRRMQCPNEVIRANAEELAAAFDTFGRRLLSS
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgcgcgatcgggacgcagacgcgcgagaggcgatggagacggcggcgaagacg
gtgtcgaagctcgcggcggacgccgagcaagccgacttggtggaactgcttcgagaggcg
cctcgggaggcgtattcgtttcaaaacgcgggatggccgagcgatgtggtgggtatgaag
aaggaggaactgccgggggtggtgctggagcggtacaacacgcggcagtcggtgtgcttt
tgcggggtgctgccggagatttcgcgcgcgtgggcgagcgtggacaacgcgttgtttttg
tggaggttggacgtcgcggacgacgtgccggtggagtacagcggcgaagagcaagcgatc
gtggcggtggggttggtgaaaccgaagagtggggtgtttttagaggcgatctcgtacgtg
ctcgtcatcgcgacgacggtggagctcgtcatggtgggggtgtgcttggaggacgacgga
cgcgagctcacgctgcatccgctgcagtactcgtgcccgacggacgcgaccatcatgaac
gacatcacgtctacgccggagggtaggatcttcttagccggtgcggacgaagcgctttat
gaactcgtgtacgcgcagagcgacacgtggcacagcaagcgatgcaaaaaggtgcgacac
agtcaaaacttgtcctcgctgttgccttcggtgctgcgattgaagggctcggacgctttg
aaacaagtcgtcgtggacgccaagcgcgggattttgtacacgcgcagcgaacaaggcgtg
gtggttgtgtacgacgtcggcgccgcggcgaaggacgcgccgagaaaagtcgccgaggtt
aaaaacgtcgcgcaactcgccgcgcaggctcgcggtcaagggtctctgtttgcatcggcg
acgtcatcggtgaagaaaggggcgaagttagtgcacgtcgcattggtgcatccggaggag
tcgtccgtcgtgacgttggtggcgatttgcgcggatggaagacgcatttacctcaccgct
cttccgccgtcgcgcgggtactcgtacggcgtcgcctcgggtacgggtagctctcgacaa
gggccttcgcgactgtccgtggtcgaacaacgcgacccgccgccgcaaggaggaaatcag
cgcggtatgacgacggcgcaggcgctcttgaacaccacgtcgagggccttggaaattgaa
gccgggttttacagcagcggcgttttgttactgtcggacgcgacgccgaacgactctgac
gcgcgattgatactttcaaaccgcgacctggcgctacccccacacttgcagttgccgccg
ccgacgcccccaccgagctcgggaagcggcactcgcggtttgcgcgaagtcgtcaccttg
gaacaacttgaagggcgctgcgcgtcgagtctcggatcgctcggtgagattcctatgcca
aagagcgtacaggacgcgatcgatccgccataccccacggggacgcttccagaagcacgt
gtaaaatcgacgggactactctctgagctcgtcacgcaatacatgtgcccgagaagaacg
tttgtgttgatgaccaacgccgggttggttcgattcgagaaggcgcgcccgattgacacg
ttgagaagtgttcttgaaaagaacattccggaacaaatcgaggagttctttaagagttac
ggaccgattgaagctgcggcaatgtgcgtcgcgttatctgtttcgggatccgaatccaac
gccgtgatcctcgccgcgaagcgggcctttgacgacccgcgtctcaccggcgagccgagc
atcgtggaggatagctacgcgcaaaatcaagagaataatggtggatctttcaacatgggg
cgtgcgatcgtgcaaccggtgctgactttttcgtcggcgcagcgtggactgtacttgttc
acggctcgcataatgtctagcacgtgggaacgagcgatcattgtgcccgttcgcgcgccc
gttcaaacgaatttgaacggcaactcgcgaccgctatcgccggcgatgaagatcgcgaac
aaagcgctcggcgcggtgcaagcggcagctcggtacatgagtgaagaaccggcgctcaga
tgctccttggatccgacgttgctcaagaatttgcacgatcgcttgatgccgttggtgact
ttcttgaagcagcgtagaccgcgcattagcagcggcgccacgatgtcgcagacgaagcgg
cgtcgagtgcgttcatccggcagcgaactcacggcactccaggaagaagagcgcagtctc
tcggccctctccgccttggtgagccgcacggcgcaggctttgtctctcattagaatcatc
atcactgatgaacgtttctcacgagtggccgacatgcttccctcggcgattcgcaaggag
ctgtcacagctcaccttgaagaagttggtttcgacgacgcacggggcgcgtttggcgggt
gcgctcatcgaagcgatgatgtctcacataatgtctcacgctcgtcacagcgccgaggaa
ttagctgcggagctccaaaagggatgcccagactttttcggcgcagattcgaggacattt
taccacgccagagacttgttgcagttggcgcgcgacgcgcgcgcgagaaaggaaaacgtc
ttgcgcgaccaatacgtgaacgatgcgatcgctttattcatgaaggtgccgacttctgga
gacttatcggccgtttgtgctgaacttgtcgatcttcgcgcgtttcatggcgtcaccgct
gtgcccctcgcggcggcggcggcgctcgaggcgcgcgcagaggaagctcgttttacgatg
cattcgcaaccgaatgtggacatggtggatctccaatcgtgctttgaagtcacgtgtacc
acgattcgggcgcttgcgactggaagggctgatgcggacgctgaaccaggttcgctgagt
cgcgtcgcggcggaagaacttcccgaggacattcgtgaacgaggtctcgtgaagattcta
gagcagcttcaacgagtgtctggagctgactcacaagatttcatgcaccgcgtatttgcg
gagctgattgcagtgagacgcgacgccatgcttttatcgctacccgcggctatgttggaa
ccgtacttggtgaacaagagcgcgttgacgtctgcgcaacaaggcggcgcgctcacgccg
gatgaggcgagacatctcgatctcttggcgcagttgtacgccgcccgaagtctgtttgga
ttggcggcacaggtcgattgctcgttagcggagcgtcgatgcgcgaacgacgaaacgttc
agtttggaccagcgcatggctttgtttgagcgcgcgctcatgcacgccagaaagtcggtc
gacgggggattgaccaatggtttggacacgtcgttttgcgaaaacgtcgacagcaaaatc
aaattgctcgacatgcagcggcgagtgctgggcgtgtgcatagagcgctcccgtcaagca
cgcgccaccggatcgtcgaacgctccggaggaggcgtttgtgtacgaattggagcgcgag
ttgaagcaactgagcgacttgtacaacgacttcgccaagccgtgtgagttgtgggacatc
tgcctcgaaatggtgcacttctcgcaataccacgatccggatggcgagattgtgtgtgac
ttatgggataagctcctcttacaagccgcgtctcgcgcgccgagcgccgcgacgtgcctg
cgggaagcctgcctcgtggttcgcgcgttgggcgtgaagttgttcccatcggacgtcgcg
tttccggtcattcacgtggctttgcgtttggagctcatggcggcaggactgtggggtgtt
cccgatgtcgcagtcgaagcgcacgtcgacgatgagtatgacacgagcgaagtcgcggac
gcgctcgtcgtcgcgtgcaaaggactcgcagagcccgtgcaacgagcgtacgaccgcttg
ctcgcgaccccggcccaacgcatgcacgataagcgtctgtcgaaagtggatgcgttacaa
accccgcgtttgcgcctccgcttgctcagatcggtgtactttgtgctccagctttgggac
cagtcgctcgtgcccaaggcgacggcgtacggcgaaccgagagcgtacgccaccggaggc
cacgtgcgcgcggcgatcggcgacttgtgcgtgagctacgcctcggaaagccgacgaatg
cagtgtccgaatgaggttattcgcgcgaacgccgaggaactcgccgccgctttcgacacg
ttcggccgccgcttgctttcttcgtag
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