Ostreococcus lucimarinus: OSTLU_17102
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Entry
OSTLU_17102 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
OSTLU_17102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_17102
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
OSTLU_17102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
5004024
NCBI-ProteinID:
XP_001420157
JGI:
17102
UniProt:
A4S3V1
LinkDB
All DBs
Position
10:complement(378838..381804)
Genome browser
AA seq
988 aa
AA seq
DB search
MGKAKARAVARSSAASSAPATKPRRGVGFTSGPTKHRTGKTLGGGVEFAKKRLKVGRKVA
KHANETDSAVRSKRIRLAAQNLQSAGAGTSGEGTRDEDAASARGTPLNELLNQCGHYAAK
TRCDGLNGLLEVCERYPGAVRARAGDAIERVGERLADEAREARRAARECLGRGVVPALGV
EGLAPFAKTLILYAGAALTHVADDVRRDAPAALDALLEAAPTLVAAHAPASTLGHLGELL
RRGDDGGVGSGSSVQRGVGSQKPATRLALLRSCRRFLETLAEGVGTTDGDRGGLSSTSSM
TTTFVWGEEARRGAATRSIGSMYAERSRQAPPSVLAATTASNDESEDSGGRITGESRAAV
RVNAKRLVELAMCVWDDAAQTFTDERGVDVDRVRVMAQSMACARLALSLADGAEESEMLE
NTDSASTAVSVVPEIARRTLGMFPSTSPASVAEKQDISRTREAMVDLNFETCRFLLDASS
SVAHEALAQHLAPGVMDALPHVLARALQYVTSTLRGVALDGGAMGEDVPTPDDAYGDVLA
LARDALTLPAWCFSASITGSACADLLVAVTETWERAVADEDIERITQCVALLTETLPEEA
RQGYFRVPIETAAGWVRHIPRVLWAFKHENPSATQKLLSLLHDVAARNPPGSPLADVLST
CEAEMAVLFFMVPPAGSPEGAKSRPGPFARLPFPSQCAAVRLVGVLPTLTPPMIRALAKM
CLDVDRVNEELCVIAIEAMQANALAAPLELTMSFYATLLVGAAGVKFLDKSSKRDVATVE
QKSWLIARRAIPSAAAALVALSDADAPWTGASLASVTLKHMWSSRVEKGDVDGATRTASG
FVALIASTAEFARSVSGQSGQSIDDDNVSGAIPEMFAWFILRAEDGDGVDVDVAWRALRA
APSTTPGPVASAVVASSESSAALTDRALAFVSKLITETAAGSIEISKDELRDVVRSIQNK
ASALEANESTKRARALDVHWNVAFGEAI
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggccaaggcgcgcgccgtcgcgcggtcgtccgccgcgtcgtccgcgccggcg
accaagccgaggcgcggcgtcgggttcacgagcgggccgacgaagcatcgcaccgggaag
acgctcggcggcggcgtggagttcgcgaagaaacgcctgaaagtcggtcgaaaggtggcg
aaacacgcgaacgagacggacagcgcggtgcggagcaagcgcatacggctcgcggcgcag
aatttgcagagcgcgggggcggggacgagcggtgaggggacgcgggacgaggacgcggcg
agcgcgcgagggacgccgctgaacgaactgttgaatcagtgcggacactacgcggcgaag
acgcgatgcgatgggttgaatgggttgttggaggtgtgcgagaggtatccgggcgcggtg
cgagcgagggcgggggacgcgatcgaacgcgtgggcgaacggttggcggacgaagcgaga
gaggcgagacgagcggcgagggagtgcctggggcgaggcgtggtgccggcgttaggggtg
gaggggctggcgccgtttgcgaaaacgttgattttgtacgcgggggcggcgctgacgcac
gtggcggacgatgtacggagggacgcgcccgcggcgctggacgcgctgttggaggcggcg
ccgacgctcgtggcggcgcacgcgccggcgagcacgctggggcacttgggcgagctcttg
cggcgcggagacgacggtggcgtcggttcggggtcgtccgtgcagcgtggcgtcggatcg
caaaagcccgcgacgcgattggcgctattgcgaagttgtaggcgctttttggagacgctc
gcagagggcgtaggcacgacggacggcgatcgcggtggtctttcgtcgacctcgtcgatg
acgacgacgttcgtttggggagaagaggcgcgccgcggcgccgccacgcgctctatcgga
tcgatgtatgcggaaagatcgcgccaagcgccgccgagcgtgctcgcggcgacgacggcg
tccaacgacgaatctgaagattccgggggacgaatcaccggtgaaagtcgtgctgcggtg
cgcgtgaacgccaaacgccttgtagagttggcgatgtgcgtctgggacgacgcagcgcag
acgtttacggatgagagaggcgtcgacgttgatcgcgttcgagtaatggcgcaatccatg
gcgtgcgctcggttagcgctcagcctcgccgacggtgcggaagaatcggagatgctcgaa
aacactgatagtgcatcgactgcggtgagtgtcgttccggaaatcgcgcggcgtactctc
ggcatgttcccatcgacgtcgccggcgagcgtggcggagaagcaagacatctcgcgaacg
cgcgaggcgatggtggatttgaatttcgagacgtgtcggttcttgctcgacgcgtcctca
tcggttgctcacgaagcactcgcgcagcatttagcgccaggagtgatggatgcgcttccg
cacgttctcgcgcgcgctttgcaatacgtcacgtcgacgctgcggggcgtcgccctcgac
ggcggcgccatgggcgaagacgtgccgacgccggatgacgcgtacggggacgtcttggcg
ctcgcgcgtgacgcacttactttaccggcgtggtgtttcagtgcgagcatcacgggtagc
gcgtgtgcagatcttctcgtcgccgtgacggagacttgggagcgcgccgtggcggatgaa
gacatcgaacgcatcacgcaatgcgtcgctttgttgacggaaactttgcctgaagaagcg
cgacaagggtactttcgcgtgccgatcgaaaccgctgcgggatgggtgcgtcacattcct
cgcgtactgtgggcgttcaagcatgaaaacccctctgcgacgcaaaagttgctgtcgttg
ctacacgacgtcgcggcgagaaatcctccgggatcgccgttggctgacgtcttatcgacg
tgcgaggcagaaatggcggtgcttttcttcatggttccacccgcggggtcacccgaaggc
gcgaaatcgagacccggtccgttcgcccgccttccgttcccgtcgcagtgtgcggcggtg
cgtctcgtaggcgtcttgccgacgctcacgccgccgatgattcgggcgttggccaagatg
tgtctggacgttgaccgcgtgaatgaagaactttgcgtcatcgctatcgaggccatgcaa
gccaacgcgctggcggcgcctttagagttaacgatgtcgttctacgccactctactcgtc
ggcgccgccggggtgaaatttctcgacaagtcgagcaagcgcgacgtcgcgacggtggaa
cagaaatcctggctcatcgctcgtcgagcgattccgagcgcggcggccgctttagtagcg
cttagtgatgccgacgcgccgtggaccggggcatctctcgccagtgtgacgctcaagcac
atgtggagcagtcgagtggaaaagggcgacgtcgacggcgccacgcgaacggcgagcggg
ttcgtcgcgctcatcgcgagcacggctgaattcgcaagatcggtgtcgggtcaatcgggt
caatcgatcgatgacgataacgtttccggcgccattccagagatgttcgcttggttcatc
ttgcgcgctgaagacggcgatggcgttgacgtcgacgtcgcgtggcgagcgttgcgcgcc
gcgccttcgacgacgcctggtcccgtcgcgagcgcggtcgtcgcgtcttccgaatcttcc
gccgcgctcaccgatcgcgcgttggctttcgtgagcaagttgatcacggaaaccgccgcc
ggttcgattgaaatttccaaagacgagttgcgcgacgtcgtccgatcgattcaaaacaaa
gcgtcggcgctcgaggcgaacgagtcgacgaaacgcgcgcgggcgctcgacgttcattgg
aacgtcgcgttcggagaggcgatatag
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integrated database retrieval system