Ostreococcus lucimarinus: OSTLU_17234
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Entry
OSTLU_17234 CDS
T01029
Symbol
CHR3510
Name
(RefSeq) predicted protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_17234 (CHR3510)
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
OSTLU_17234 (CHR3510)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3535
Helicase_C
TOR1L1_N
HEAT_EF3_N
HEAT_EZ
TPR_Trm732_C
HEAT_2
UTP20
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
5004317
NCBI-ProteinID:
XP_001420413
JGI:
17234
UniProt:
A4S4D1
LinkDB
All DBs
Position
11:complement(join(97367..100243,100551..102983))
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AA seq
1769 aa
AA seq
DB search
MAESGGSRLDRLIKLLDTGSTAAARREAARQIGELAASHSTQLPNLLRRVRAHLRSKKWE
TRVAASATMSEIASRLRHPSVDALIAMESDGAERDAGRDASEAKTGRDANAGSDALDLTF
AKFDVERVLEKAGILLSSSGIGWRLENGPGTKAERLAQAKASLKRRLGMELGPEAGAMMD
ENMKMSDLVKDEDLLDDGKVTVQEKVAVGDSAAEAVDGLTGDVDYSHLSARELNKLKRKA
KRMLREGANPLDAKRSKQDEEAARLEQEKAEAEEDDEEQAEVAAGGWPLARTCETLAYMM
FSEGWEERHGAAAALREVLRHQAASAAIWAPPPGVKPEPGTVEIARESNAAWLEDMCVRL
LCILALDRFGDFAGDGAVAPVRETSAQALGAALLPLSPQAVDAVVSCTLTLLSRPEWEVR
HSALLGLKYILAAKSELAVELLPAALPAATKALVDADDDVRGAAAESLLPAVEHLPSHPQ
FNELLSSLWGLLNELDDLSPSAVPVMKLIAELYALESTRAKSTAALAEVVPRLWPFAAHP
IPAVRLAVWQTLARLLAVEPNASTQLWVQEACAPAMRHAFQGALLDVDAASADAASEAWV
ALLRTVPIAIIEATFTVHGAKWCELATTVANARGEGKLIFVSTPPSVKGEIRAVAKDWPA
TTAGRMRGLECLARLAAAFGAHERSSSVARMEQHIVGMLTGELATARLAGAHLLTSWLRV
VPPGPQRPTLQAPGAQLGAILANTNPAYPSAPSPTPYGEVAQMVKYVKSESMAFLRVAAT
NGVVVTGEVPSPEADGFGADSAATLSAAVPQSEIAAVETARGSLHASAQRLRDTEAKLHG
AVLAAAAGAAVGFGALPPKLNPFIQPLMSSVRRERDADLQAHAAASVAAMMKLCTSRSPS
PNDKLLKNITSMICGDEAETPKAGLTEEVEEEEDDGKKKKSVAGIVDEEVISDATIARRG
GEAVIRSAASLFGADVFNQLGALDALMMKPITQAPPENAPTATLQSLVDALQLFKILGPV
VHEALEEKVIETTKTAFAAALYTDVAVRKTAAKTIASIASKHPERIISSLLDFIVPKLEE
GEAASQTAKRAGAVGLASELVDTLGAVLAPYCVLLLVPLMGRMSDPDLKIRGNATRAFAK
LVPLLPLAVGKEPPNDLTTKQKERSKKDGEFLEALLDNSKIEDFKLPFKCARTLRPYQQD
GVNWLAFLRRFKLHGALADDMGLGKTLQSTCILAATTVERKEAGLKTLPHLVICPSTLVS
HWAYEIGLYVEPDVLRPLEYHGSPPDRRALQKDFGKYDVVIMSYESVRADFDSLDKFDWC
YCVLDEGHAIRNPKSRVTQAVKSVRAEHRLLLSGTPIQNDVVELWSLFDFLMPGFLGTER
EFKKTYGIAAARSAAAKKGGGLSEQGALATGALHKQVMPFVMRRTKDEVLKDLPPKIIQD
VYVELTDAQRKMYDAFESSEAKDQAVSAIEGGGGAEGAAQHVFTTLQYLRKLCSHPKLVV
SDGASKKFNPEMRSPKFDALKQILIDCGIGVDLEEEKSNGDEGKPNPASGAGHRVLVFSQ
LKSLLDLVENELFTTQMRDVSWLRLDGSIPPSQRFDVVRKFNADPSIDVLLLTTHVGGLG
LNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQRKTVNVYRILTRGTLEEKIMSLQRFKL
DVANAVVNADNASMSAMDTGQMLELFTAEKGVKLGKDGAPVAKGAAAAAAGAASGGLSNI
VNGLEEMWDEAQYAEEFSVDDFVSKLKHK
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatccggcggctcgcgcctggaccgcctgatcaaactcctcgacaccggctcc
accgccgccgcgaggcgcgaggccgcgcgtcagattggcgaactcgccgcgtcgcactcg
acgcagttgcccaatctcctccgtcgcgttcgcgcgcacctgcggagcaaaaaatgggag
acccgcgtcgcggcgagcgcgacgatgagtgaaatcgcgtcgcggttgcgacacccgagc
gtggacgcgctgatcgcgatggagagcgatggggcggaacgagacgcgggacgggacgcg
agcgaggcgaagacgggacgggacgcgaacgcgggctcggacgcgctcgatctcacgttc
gcgaagttcgacgtcgagcgcgtgctggaaaaggcggggatactgttgagttcgagcggg
atcgggtggcggctggaaaacggaccggggacgaaggcggaacggttggcgcaagccaag
gcgtcgttgaagcgaaggttaggcatggagctcggccccgaggcgggagcgatgatggac
gagaacatgaagatgagtgatttggtgaaggatgaggatttgctggacgatgggaaggtg
accgtgcaggagaaggttgcggttggcgatagcgcggcggaggcggtggacgggttgacc
ggcgacgtcgattacagtcatttgagcgcgcgagagctgaacaagttgaagcgtaaggcg
aaacggatgttgcgcgaaggcgcgaatccgctggacgcgaagcggtcgaagcaggacgag
gaagcggcgcgtttggaacaggagaaggcggaagcggaggaggacgacgaggaacaggcg
gaagtcgccgcgggcggatggccgctcgcgcgcacctgcgagacgttggcgtacatgatg
ttttcggaggggtgggaagagcgtcacggcgccgccgcggcgttgcgtgaggtgctacgt
catcaggcggcgagcgcggctatttgggcgccgccgcccggagtgaaaccagaaccggga
acggtggagatcgctcgcgagtccaacgccgcttggctcgaggacatgtgcgtgcgctta
ctgtgcatactagcgcttgaccgtttcggtgatttcgcgggcgacggcgcggtggcgccc
gtccgtgagacgtccgcgcaggcgctcggcgcggcgcttttgccgttgtcgccgcaagcc
gtcgacgccgtggtgtcgtgcacgctcacactactgtcgcgccccgagtgggaagtgcgg
cactccgcgttgctcgggttgaagtatattctcgccgcaaagtcagagttggcagtcgag
cttttgcccgcagcgctacccgcggcgaccaaggcgctcgtggacgccgacgacgacgtg
cgaggcgccgcggcggaatccttattacctgccgtcgagcacttgccgagtcatccgcaa
ttcaacgaattactttcgtcgttgtgggggctcctcaacgagctcgacgacttgtcaccg
agtgcggtaccggtgatgaagctcatcgccgaactgtacgcgttggaatcgacgcgcgca
aagtccaccgccgcgctcgctgaagtcgtcccacgtctttggccgttcgccgcgcacccg
atcccagccgtacgactggccgtgtggcagacgcttgctcgactgttagccgtcgagccg
aacgcgtcgacgcagttgtgggtgcaagaggcgtgcgcgccggcgatgcgtcacgcattt
caaggcgcgctgctcgacgtcgacgcggcgagcgccgatgcggcgagcgaggcgtgggtg
gcgcttttgcgcacggtcccgatcgccatcatcgaggctacgttcacggtacacggcgcg
aagtggtgcgaactcgcgacaacggtggcgaacgctcgtggcgagggcaaattaattttc
gtctccacgccgccgagcgttaagggtgagattcgcgccgtcgcgaaagattggccggcc
accaccgctggtcgtatgcgtggactcgagtgcctcgcgcgtctagccgcggcgttcggc
gcgcacgaacgctcgagttcggtcgctcgtatggagcagcacatcgtgggcatgctcacg
ggcgagctcgccaccgcgcgtctcgccggcgcgcacttgctcacctcttggcttcgagtg
gttccgcctggtccgcaacgtccgacgttgcaagcgcctggtgcgcaactgggggcaatt
ttagcaaatacgaatccggcatatcccagcgcaccgtcgccgacaccgtacggcgaggtg
gcgcaaatggtcaagtacgtgaaaagcgaatcgatggcatttttgcgtgtggcggcgacg
aatggcgtcgtcgtcacgggtgaagttcctagtcccgaggcagatggttttggtgcggat
tcggctgcgacgctctcggcggctgtgccacagtccgagatagctgccgtggaaacggcg
cgaggttctcttcatgcatccgcgcaacgtttgcgagataccgaagcgaagcttcacggc
gccgtgctcgccgccgccgcgggtgccgctgtcggtttcggcgcgttgcctccgaaactg
aatccattcattcaaccgttgatgtcgtctgtgcgtcgcgaacgcgatgcagatttgcaa
gcacatgccgcggcttcggtggcggctatgatgaagctgtgcacttcgcgctcgccgtcg
cctaacgataagcttctcaagaacatcacgtcgatgatttgcggcgacgaagccgagacg
cccaaagctggattgacggaagaagtagaagaagaggaagatgatgggaagaagaagaag
tccgtcgcgggcatcgtcgatgaagaagttatcagtgacgcgacaatcgcgagacgcggt
ggcgaggcggtgattcgttcggcggcttcgctcttcggagcggacgttttcaaccaactt
ggcgcgttggacgcgctcatgatgaagccgatcacgcaagccccgcctgaaaatgctccc
accgcaacgctgcagtcactcgtcgatgcgttgcagttgttcaagattttaggccccgtg
gtgcacgaagctttggaggagaaagttatcgaaacgaccaagacggcgttcgccgcagcg
ttgtacaccgacgtcgcggtgcggaaaactgcggcaaagaccatagcgagcatcgcttcg
aagcatcccgagcgaatcatttcgtcgttgttagacttcatcgtgccgaagttagaagaa
ggagaggcggcctcgcagacggcgaagcgtgctggtgccgtcggcctcgcgagcgaactt
gtcgacacactcggcgccgtgctcgcgccgtattgcgtcttacttctcgttcctctgatg
ggtcgaatgagtgatccggatctgaaaattcgtggaaacgccacccgtgcgttcgcaaag
ctggtaccgttgcttccgctcgctgtcggtaaagaaccgccgaacgatctgacgaccaag
caaaaagaacgctcaaagaaggatggcgaattcctcgaggcgctcttggacaacagcaag
attgaagacttcaaactcccgttcaagtgtgcgcgcacgctgcgcccgtatcagcaagat
ggtgtgaattggctcgcgttcttgcgtcgcttcaagttgcacggtgcgctcgcggacgac
atgggtcttggaaagacgcttcaatcgacgtgcattctcgccgcgacgacggtggagcgc
aaggaagctggattgaaaacactcccgcacttggtgatctgcccgagcaccctcgtcagt
cactgggcgtacgagatcgggctttacgtcgaaccggatgtgttgcgcccgcttgagtac
cacggcagtccacccgaccgtcgcgcgttacagaaggactttggcaagtacgacgtcgtc
atcatgtcgtatgaatctgttcgcgccgatttcgattcgttggacaaattcgactggtgt
tactgcgtcttggacgaaggtcacgccatccgcaacccaaaaagtcgcgtgacgcaagcg
gtgaagagcgtgcgcgcggagcaccgattgttgctctccggcacgccgattcaaaacgac
gtcgtggaactttggagtttgttcgactttctcatgcctggatttttaggcaccgagcgc
gagttcaagaagacttacggcatcgccgcggcgagatcggcggctgcgaagaaaggcggt
ggactgagcgagcaaggcgcgctcgccacgggtgcactgcacaagcaagtcatgcccttc
gtcatgcgccgcacaaaggacgaagtgctcaaggatttgccgcccaagattattcaagac
gtctacgtcgaactcacggacgcgcagcgcaagatgtacgatgcgttcgaatcaagcgaa
gcaaaggatcaagccgtgagcgcgattgaaggcggtggaggcgccgaaggcgcggcgcaa
cacgtcttcacgacgctgcaatacttgcgcaagctgtgctcgcatccgaaactcgtcgtg
tctgacggcgcgagcaaaaagttcaatcctgagatgcgctcgccgaaattcgatgcgttg
aagcaaatattgattgattgtggcattggagtagacttagaagaagaaaagtccaacggg
gacgaggggaagccgaatccggcgtcgggcgccggtcatcgcgtcttggtgttttcccag
ctcaagagcttgctcgacttggtagaaaacgaacttttcacgacgcaaatgcgcgacgta
agctggttacgactcgatgggagtattccaccatcgcagcgattcgatgttgtgcgcaag
tttaacgcagacccgtcaatcgacgtgctcttgctcacgacgcacgtcggcggtttggga
ttaaacttgacatccgccgacaccgtcgtcttcctcgagcacgactggaacccgcagaag
gatttgcaagccatggatcgcgcacaccgactcggtcaacgcaagaccgtgaacgtctac
cgcatcctcactcgcggcacgctcgaagagaaaatcatgtctctgcagcgcttcaagctc
gacgtcgccaacgccgtggtgaacgccgacaacgcgtccatgagcgccatggacaccggt
caaatgctcgagctcttcaccgcggagaagggtgtcaaactcggcaaagacggtgcaccc
gtcgccaagggcgcggccgccgccgccgcgggcgccgcttctggcggtctctccaacatc
gtcaacggactcgaagaaatgtgggacgaggcgcaatacgccgaagaattcagcgtcgac
gatttcgtctccaaactcaaacacaagtga
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