Ostreococcus lucimarinus: OSTLU_17301
Help
Entry
OSTLU_17301 CDS
T01029
Name
(RefSeq) predicted protein
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_17301
Spliceosome [BR:
olu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
OSTLU_17301
Complex C
U4/U6.U5 tri-SnRNP related factors
OSTLU_17301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
DUF7206
Motif
Other DBs
NCBI-GeneID:
5004581
NCBI-ProteinID:
XP_001420457
JGI:
17301
UniProt:
A4S4L3
LinkDB
All DBs
Position
11:complement(join(245634..246478,246542..247007,247220..247597))
Genome browser
AA seq
562 aa
AA seq
DB search
MMRETNDKTSVEYQRMSWDALKKSINGLVNKVNASNVQHVVPELFQENLIRGRGLFARSV
MKSQMASPQFSGVFAALVAVVNTKFPEIGELIAKRCVLQFRRAYKRNDKPVCVAATRFLA
ALINQQIIHELIALELLTVLLGTPTDDSVEVAIDFVKECGFTLQELTPQGLHGIFERFRG
ILHEGEIDKRVQFMIEGLFAFRKGGFEGKKGVSPELDLVDEDDQIVHEIGLDDEMQAQPG
LDVFKEDPEFEENERRYADIRKEILGESSSSSSDSDSDSDSGDGKVEIADLTETNLVNLR
RTIYLTIMSSLDFEEAGHKLMKLNIPPGAEVELCTMLVECASQERTYLRYYGLLAQRFCF
IHKIYPQLFDEVFMKQYSTIHRLETNKLRNVAKFFAHLLATDAMSWTCLAYIQLTEEATT
SSSRIFIKILFQELAEALGLKQLNEKMQNPEMREYFQGIMPKDEPRNTRFSINFFTSISL
GALTEDMREWLKTAPKTVPKRSRSSSSSSSSSSSSSSSSSSSSSSTSGSRSSSSSSSGSS
SHSSSSSRSRSRDRRRKRSRRR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgagacgaacgataagacgagcgtcgagtatcaacgcatgtcgtgggacgcg
ctgaagaaatcgatcaatggattggtgaataaggtgaacgcgtcgaacgtgcaacacgtg
gtgccggagctgtttcaggagaatttgatacgcgggcggggattgttcgcgaggagcgtg
atgaagtctcagatggcgtcgccgcagtttagtggtgtgttcgccgcgctggtggcggtg
gtgaacacgaagtttcctgaaatcggcgagttgatcgcgaagagatgcgttttgcagttt
agacgggcgtataagaggaacgataagccggtgtgcgtggcggcgacgaggtttttggcg
gcgctgattaatcaacagatcattcacgagttgatagcactagagttattgactgtgttg
ctaggcactcccacggacgacagcgtagaggttgcgattgattttgtcaaggagtgcggc
ttcacgctccaagagctcacgccgcaaggtttgcacggcatctttgagcgatttagagga
attttacacgaaggtgagatcgacaagcgcgttcagtttatgatcgaagggttgttcgcg
tttcgaaaaggtggattcgaggggaaaaagggggtctctcccgagctagatttggtcgac
gaggacgaccaaatcgtgcacgaaatcggcttggacgacgagatgcaagcgcagcctggt
ttggatgtgttcaaagaagatcccgagtttgaggaaaacgagcgtcgatatgcagacatt
cgcaaggaaattctcggtgaatcgagctcgagctcgagcgatagcgacagcgacagcgac
agtggcgatggcaaggtcgaaatcgcggatctcacggagacaaatctcgtaaacctccga
aggacgatttatctcaccatcatgtcttcgttagatttcgaagaagctgggcataaattg
atgaagctcaacattccgccgggcgccgaagtagagttgtgcacgatgctcgttgaatgt
gcgtcgcaggagcgcacctacttgcggtactacggtttgctcgcgcaacggttttgtttc
atccacaaaatctacccgcaactgttcgacgaagttttcatgaagcagtacagtacgatt
caccgtttggagacaaacaagcttcgcaacgtggcaaaattctttgcgcacttactcgcc
accgacgccatgtcgtggacgtgtctggcatacatccaactcaccgaggaagctacgacg
tcaagttcacgaatttttatcaagattctgttccaagaactcgcagaggcgctcggtttg
aagcagctcaacgaaaagatgcaaaatcctgaaatgcgtgagtacttccaaggcatcatg
cccaaggacgagcctcgcaacacgcggtttagcatcaactttttcacctccatctctctt
ggtgcgcttactgaggacatgcgtgagtggttgaaaacagctcccaagacggtgccgaag
cgctctaggagctcgtcgagttcgtcgagttcaagctccagttcgtcgagctcgagctcc
agttcgtcgagttcgacctccgggtcgcgtagttcgtcgagttcatccagtggatcgagc
tcgcatagttcatcgtcctcgcgctcgcgctccagggacaggcgtcgtaagcgatctaga
agacgttga
DBGET
integrated database retrieval system
