Ostreococcus lucimarinus: OSTLU_1733
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Entry
OSTLU_1733 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_1733
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OSTLU_1733
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
Helicases
OSTLU_1733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
5006614
NCBI-ProteinID:
XP_001422556
JGI:
1733
UniProt:
A4SB53
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All DBs
Position
20:join(<335139..336345,336460..>337001)
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AA seq
583 aa
AA seq
DB search
FEDLVPALRASSLAVLERAGFARSTPVQAATVPLLCSHKDVSVEACTGSGKTLAFVLPMI
EILARAKRELKRYQVGAVIVSPTRELAKQIHEVAAPFVRTLGKERSETNEGEGDLAMLLV
GGTDVAKDVATFAATSPLVLIATPGRLWDVMQRSKELDGKKCELLILDEADRLLGMGFMA
TLNNIISRLPKQRRTGLFSATQTEEVAELARAGLRNPVRVTVRDALNSAAKAAGEKAGKL
PTQLQLLYRICSVDSKLWHFVNFIKEHRECKVIVYFLTCACVDFYESALKELLPESTAIA
LHGKMKQSARESALGKFTEQKSGILMCTDIAARGLDIPGVDWIVQFDPPQDPAAFVHRVG
RTARMGRDGSALVFLSPNSEASYVDFLRIRGVEIKPAPGTREGAAHVHAVLRKASEKKRE
IMEKGVRAYVSFIRGYKEHHCRFIFRFKELEYGALAMSMGLLRLPKMKEIRKAPKKFMEC
FVESSVHADSVAFEDKAREKQRQRTLKEQEEAAEAQRLLDADKPKPKKEKVKEEKRQTAF
KRRKEESRADIEEMEDDYRALKKLKKGKMTEEEFDLEIGFDEV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttcgaagatctcgtccccgccctgcgcgcgtcctcgctcgccgtcctcgagcgcgccggt
ttcgcgcgctcgacgccggtccaggccgccaccgtcccgctgctctgctcgcacaaggac
gtctccgtcgaggcgtgcacggggtcggggaagacgctggcgttcgtgctgccgatgatt
gagattctggcgcgagcgaagcgcgagctgaagcgataccaggtcggggcggtgatcgtg
agcccgacgcgagagctggcaaagcaaattcacgaagtcgcggcgccgttcgtgcggacg
ctggggaaagaacggagcgagacgaatgagggtgaaggagatttagcgatgttgctcgtg
ggaggaacggatgtggcgaaggatgtggcgacgttcgcggcgacgtcgccgctggtgctc
atcgcgacgccggggcgcttgtgggacgtgatgcagcgaagcaaagagctggacgggaag
aagtgtgaattgctcatattggacgaagccgatcgattgctcgggatgggattcatggcg
actttgaataatattatatcgcgactacccaagcagcgaaggactgggttgttcagtgcg
acacagacggaagaggtggcggaactcgcgagagcgggcttgcggaacccggtgcgagtg
acggtgcgagacgcgttgaactcggctgcaaaggcggcgggtgagaaggctgggaagctt
ccgacgcagctgcagctgctttatcgtatatgttccgtagattccaagctgtggcatttc
gtgaacttcatcaaggagcatcgcgagtgtaaagtcatcgtctactttttgacatgcgcg
tgcgtggacttttacgaatcggcgctcaaagaacttttgccagagtccaccgccatcgcg
ctgcacggaaaaatgaaacaaagcgcccgggaaagcgctttgggtaaattcaccgaacaa
aagtcgggtattctgatgtgtactgacatcgcggctcgcggtttagacattccaggcgtc
gattggattgtgcaatttgatccaccgcaagacccggcggcgtttgtgcatcgtgtcgga
agaactgcgcgcatgggtcgagatggaagtgcattagtgtttttatcgccgaattcggag
gccagctatgtggactttttgcgaattcgcggtgtagagatcaagccggctccgggaacg
cgcgaaggtgcggcgcacgtgcatgcggtgttgcgaaaagcgagcgaaaaaaaacgggaa
attatggagaagggcgtgcgagcgtacgtctcattcattcgcgggtacaaggagcatcac
tgtcgattcattttccgatttaaagagctcgaatacggcgcgctcgccatgtccatgggt
ctgcttcgtcttccgaagatgaaggaaattcgcaaggcaccgaaaaagtttatggaatgc
ttcgtcgaatcatccgtccacgccgattcggtggctttcgaggacaaggctcgcgaaaag
caacgtcaaagaaccctcaaggagcaagaagaagcggccgaggcgcagcgtttattggat
gcggataaacccaaacctaagaaggaaaaggtcaaggaggaaaagcgccagacagccttc
aaacgtcgcaaggaagagtccagagccgacatcgaagagatggaggacgattaccgcgcc
ctcaaaaagttgaaaaagggcaagatgacggaggaagagttcgatctcgagatcggtttt
gacgaagtc
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