Ostreococcus lucimarinus: OSTLU_17735
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Entry
OSTLU_17735 CDS
T01029
Symbol
CHB3501
Name
(RefSeq) predicted protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OSTLU_17735 (CHB3501)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_17735 (CHB3501)
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_17735 (CHB3501)
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
OSTLU_17735 (CHB3501)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
OSTLU_17735 (CHB3501)
PBAF complex
OSTLU_17735 (CHB3501)
GBAF(ncBAF) complex
OSTLU_17735 (CHB3501)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
DSBA
SWIRM-assoc_1
ZZ
Myb_DNA-binding
Myb_DNA-bind_6
Thioredoxin_2
Zn_ribbon_InsA
HTH_31
CTNNBL
C1_2
Motif
Other DBs
NCBI-GeneID:
5005065
NCBI-ProteinID:
XP_001420888
JGI:
17735
UniProt:
A4S659
LinkDB
All DBs
Position
13:join(39424..41538,41820..42413)
Genome browser
AA seq
902 aa
AA seq
DB search
MRATLAASADEPGVTHVLRTDDSVNDDEIEDGALWRITETRVATSSGKTEQRLHFWFYPD
SYDAWYADSSISGKGKAPWAPETSVILRNKAEKRNDLPHNVRARWLRDSHTFNEWMNELD
YEYDVTREMLSAPRHAWDPSNAPQNKRARAPENFEGDAEILAPGEEERVPWGFAVTRRRV
VRAHPVVAAAASQDDGALVLQDDEELITKEFMIAKTLRMQNISVDQLPWNATPSMRKAER
KAEPLTEYRVPTHSAWFKWGEVHAIERRALPEFFDDDDTCQKYIACRNEIMNQFRFKGQE
VTLHEVSSSRTTKNIVDAAAHQRIFSFLEQWGLINWQFTSGRDVIDLKQKPLAAWRRIVT
GEDGAARVEKTDPLAAFKGTLFEFSKCRATTASGLHPLEPQSRYAPSSETQLERQSLDAL
FASHDALSKRGVDVKFACNACGADLKSTGVFYHAFLTRDFDLCPSCFSKGVYPHGQASGD
FVKAMYPDFHAEAVSADEIVDDAEWTPQEVAALLDAISQSNELNWNDIASAVGTKSEDEC
LKHFARMPIEDAAIENIERELLVPRGAIIDDEGAKILDPVPFSFAPNPTMAQLEFLVSMI
SPRVAAASAKAALTKIALGGSLDAADLNVDGLAAAAIQAKILAQDEEHEVHRIIASALDV
LLKKLEIKLRFLGRLVDDEPETASRLAKLREESARNRTNDLYTRDLVSSHDWRRMGADVA
RAGVNKRSWYNERFGADTVATFEPRLASAFAKAGIEGAYTLDGNTGDTRPAHRVAAYAEE
THGPAAQDAFMRAMFHRYFIEALAPCDEAVMRDAASAAGLDEAAVSKVLADGEASPFETV
VEEQMSATRARVRGVPHFIITCDGDGASRKIEIGGAQPPEAFLDAFAELLDLDADDVAAT
KS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgacgttggcggcgtccgcggatgagccaggggtgacgcacgtcctacgcacg
gatgattcggtgaatgacgacgagatcgaggacggcgcgttgtggcgaatcacggagacg
agagtggcgacgtcgagtggaaagacggagcaaaggttacacttttggttttatccggat
tcgtacgacgcctggtacgcggattcgtcgattagtggtaaggggaaagcgccgtgggcg
ccggagacgagcgtgattttgagaaataaagcggagaagagaaacgacctgccgcacaac
gtgcgcgcgcgatggttgcgcgacagtcacacgtttaacgagtggatgaacgagctcgat
tacgagtacgacgtgacgcgcgaaatgttgagcgcgccgcggcacgcgtgggatccatcg
aacgcgccacaaaacaaacgcgcgcgtgcgcccgaaaactttgagggtgatgccgaaatt
ctcgctccaggagaagaggaacgcgtgccgtgggggtttgccgtcacgcgtcgtcgcgtc
gttcgcgcgcatccagtcgtcgcggcggcggcgagtcaagacgacggcgcactcgtcttg
caagacgacgaagaactaatcacgaaagagttcatgattgcgaaaacgctacgcatgcag
aatatctcggtggatcagttgccgtggaatgcgacgccgtcaatgcgcaaagccgagcgt
aaagccgagcctttaacggagtacagagtgccgacgcacagcgcttggttcaaatggggc
gaagttcacgccatcgaaagacgtgcgttgccagaattcttcgacgatgatgacacgtgt
caaaagtacatcgcgtgtcgaaacgaaatcatgaatcagtttcgcttcaaaggccaagag
gttacgttgcatgaagtgtcttcgtcaagaacgacaaaaaatattgtcgacgccgccgcg
catcagagaattttctcatttctcgagcagtggggattgattaattggcaattcacatcc
ggacgtgatgtgattgacttgaaacaaaaacctctcgccgcgtggcgtcgcatcgtcact
ggcgaggatggcgcggcgcgtgtcgagaagacggatcccttagccgccttcaaagggacg
ttgttcgagttttcgaaatgtcgtgcgacgactgcgagtggtttacacccgctcgaaccg
cagtcgagatatgcgccgtcttcggaaacgcaactcgagcgtcaatctttggatgcgttg
tttgcctctcacgacgcgctgtcaaagcgtggggtcgacgtcaagtttgcgtgcaacgcg
tgcggcgctgatttaaagagcactggcgttttttaccacgcgtttctcacgcgtgatttt
gatttgtgcccatcgtgcttttccaaaggcgtgtacccgcacggccaagcgagcggcgac
tttgtcaaggcaatgtacccagactttcacgccgaagccgtctcggcggacgaaatcgtc
gacgacgccgagtggacgccgcaggaggtcgccgccctgctcgatgcaatttcgcagtcg
aatgagttaaattggaacgatattgcttctgcggtcgggacaaagagcgaggatgagtgc
ttgaagcacttcgcgcgcatgcccatcgaagacgccgcgattgaaaacatagagcgcgag
ttacttgtgccgcgcggcgccatcatcgatgatgagggagccaagatcctcgatcctgtg
cctttctcattcgccccaaaccccacgatggctcagctcgagtttttggtgagcatgatc
tcccctcgcgtcgccgctgcgtcggcgaaagccgcgctgacgaaaatcgcgctcggcggg
tcgctcgacgccgccgacctcaacgtcgacggtctcgccgctgccgccattcaagccaag
atcctggcccaagacgaagaacacgaagttcatcgcatcatcgccagtgctctggacgtc
ttgctgaaaaagctcgaaattaagctcagattcctcggccgactggtcgacgacgagccg
gagacggcgagccgtctcgccaagcttcgagaggagtccgcgcgcaatcgaacgaacgat
ctgtacacgcgcgacctcgtgagttctcatgattggcggcgaatgggcgccgacgtcgcg
cgcgcgggcgtgaacaagcgctcgtggtacaacgaacgattcggcgccgatacggtggcg
acgttcgagcccaggctcgcgagcgcgttcgcgaaggcggggatcgagggcgcgtacacg
ctcgacggcaacaccggcgacacgagacctgcgcaccgcgtcgcggcttacgccgaggaa
acgcacggcccggcggcgcaggacgccttcatgcgcgccatgttccacagatacttcatc
gaagcgctcgcgccgtgcgacgaagccgtgatgagagacgcggcgagcgccgcgggtttg
gacgaagcggcggtttccaaagtgctcgccgacggcgaggcgtcgccgttcgagacggtc
gtggaggagcaaatgtcggcgacgcgcgcgcgcgttcgcggcgtgccgcacttcatcatc
acgtgcgacggcgacggtgcgtcgcgaaagattgagatcggcggcgcgcaaccgcccgag
gcgtttttggacgcgttcgccgagcttttggatttggacgccgacgacgtcgcagcgacg
aagtcctaa
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