Ostreococcus lucimarinus: OSTLU_18991
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Entry
OSTLU_18991 CDS
T01029
Symbol
HMGB3501
Name
(RefSeq) predicted protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
olu03000
]
OSTLU_18991 (HMGB3501)
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_18991 (HMGB3501)
Transcription factors [BR:
olu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
OSTLU_18991 (HMGB3501)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
OSTLU_18991 (HMGB3501)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
POB3_N
HMG_WDHD1
HMG_box_5
BUD22
Motif
Other DBs
NCBI-GeneID:
5006737
NCBI-ProteinID:
XP_001422680
JGI:
18991
UniProt:
A4SAX2
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Position
20:complement(186780..188648)
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AA seq
622 aa
AA seq
DB search
MSAEFTVAARALGRGSGTQGELTLSKAIGARFRAATGAGEQKKTEIEAGKVREVRWSDAP
TGGVLRVRSTDGRTLVLGGMGTEDAKNAAEYAARELGCASGETKMNVNGRNWGDVAIEGS
GTVFEVGGKTAFEIDGQYISEATVVGKSDVVLQFHHDDTAAEKDSLVEMSFYVPPGSETW
KGDDMEDPDDTAAKRLHAAIMSIAAADAEAGEPVAEFDGVSMVVPRGKVSIELHNTHMRM
QSSTLDFKVQYSSIVRVYLLPKPHSNQSHAVIALDPPIRKGQTFYPHILAMFNDDDHLTV
EPNLAADMKDKFPTLESTYDGSSGEVFVRVLKNMAGVKLTRQSLFTASAGGHAIRVSHKA
DVGLLYPLEKAFFYLPKPPLLLHYSEVDEVEFERHSAQGATSGRTFDVSVNMKNGSSYDF
HGIQRSEFQNLVNFLTAKQVRISNVDANARADQLIAEASDDDDEGYARRGDDDSEEDEDF
AAGSESDGGEPTDSDSDSESDEGAKKSKKSPKAKRAKKDPNAPKRGLSAYMFFSAAKRAE
ITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQQADEDKIRYEREMEAYRAGGSQPKVE
IKDDDDSDADDAARDVDAMDED
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagtttaccgtcgcggcgcgcgcgctcggacgcgggagcgggacgcaggga
gagttgacgctgagcaaggcgatcggcgcgcggtttcgagcggcgacgggcgcgggcgag
cagaagaagacggagatcgaggcggggaaggtgcgcgaggtgcgatggagcgacgcgccg
acgggtggggtgctgcgagtgcgatcgacggacggacggacgctcgtgctgggagggatg
gggacggaggacgcgaagaacgcggcggagtacgcggcgcgcgagctggggtgcgcgagc
ggcgagacgaagatgaacgtgaacggacggaactggggcgacgtcgcgatcgaggggagc
gggacggtgtttgaggtcggtgggaagacggcgtttgagatcgatgggcagtacatctcc
gaggcgacggtcgtcgggaagagcgacgtcgtcttgcaatttcaccacgacgacacggcg
gcggagaaggattctttggtggagatgtcgttttacgttccgccgggcagcgagacttgg
aaaggagacgatatggaagatcccgatgacaccgcggcgaagcgtttgcacgcggcgatc
atgtcgatcgccgccgccgacgccgaggcgggcgaacccgtggcggaattcgacggcgtc
tccatggtcgtcccgagaggcaaggtttcgatcgagttgcacaacacgcacatgcgcatg
caatcctcgacgctggacttcaaggttcagtacagctccatcgttcgcgtgtacttgctt
ccgaagccgcactcgaaccagtcgcacgcggtcatcgcgctcgacccaccgattcgcaag
ggacaaacgttttacccgcacattctcgccatgttcaacgacgacgatcatctcacggtg
gaaccaaacttggctgcagacatgaaagacaagttccccaccctcgagtcgacttacgac
ggctcctcgggagaagtcttcgtgcgcgtattgaaaaacatggctggcgtcaagttgacg
agacaaagcttattcaccgcctcggcgggcggacacgccatccgcgtgtcgcacaaggct
gacgtcggcctactgtacccgcttgaaaaagcgttcttctacttgcccaaacctccgctg
ttgttgcactacagcgaagtcgatgaggttgagtttgagcgtcacagcgcgcagggcgcg
acgagcggcaggacgtttgacgtctctgtgaatatgaagaatggctcatcgtacgatttc
cacggcattcaacggtcggagttccagaacttggttaacttcttgaccgccaaacaagtg
agaatctccaacgtcgacgccaacgcgcgcgcggaccagctcatcgccgaagcttcggac
gacgacgacgaaggctacgcgcgacgcggcgacgacgacagcgaagaggacgaagacttc
gccgcgggaagcgagtccgacggcggcgagcccaccgacagcgattccgacagcgaaagc
gacgagggcgcgaagaagtcgaagaagtcgcccaaagccaaacgcgcgaagaaggatccg
aacgctccgaaacgaggcttgtccgcgtacatgttcttctccgccgccaagcgcgccgaa
atcaccgccgctaacccttcgttcggcgtcaccgacgtcgccaaggcgctcggcgaaaag
tggaagacgatcaccgacgaagaaaagagcgtgtaccagcaacaagccgacgaggacaag
attcgatacgagcgcgagatggaagcctaccgcgccggcggttcgcagcccaaggtggag
atcaaggacgacgacgactccgacgccgacgacgccgcgcgcgacgtcgacgccatggac
gaagattag
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