Ostreococcus lucimarinus: OSTLU_2239
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Entry
OSTLU_2239 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSTLU_2239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_2239
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OSTLU_2239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
DUF6225
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
5003390
NCBI-ProteinID:
XP_001419267
JGI:
2239
UniProt:
A4S0Y1
LinkDB
All DBs
Position
8:complement(join(<51627..52391,52443..>53219))
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AA seq
514 aa
AA seq
DB search
LGEYRKLPIKRYAARAKRETGEGRYWREYKSTALSEQVNAVTSVSYGGAGSSGGERGALA
ATSGARVTLYAPSGARKLRTFARFKDVAYSGVLRDDGKALAVGGQAGVVQLFDCGSRAVL
RKFTTHSAAVRAVRWSADKLHLGSASDDATVRIWDISTGNCVRRHDGHTDYVRALERSTV
SQEMWASGSYDHTVKIWDARQGREAVMTLDHGSPVEDVAWYPNGNLLVSVGGEDVCVWDA
IGGGRLLRRLRSHQKTITTIGSESALESNAPRMITGSLDGFVKIHELDTFTVTHSIKYPG
PVLTCSLSPDANCLATGLANKVLSVRRRTKPRNSDDPSGYQGVRSKKKGFTVKKPRRLDA
SHWRYFIRGQNSKAAADATRVLRRRRVHLAAHDRMLKQFRYGDALDAALHVGRAEVVAAV
IEEVGRRGGLQKALANRDDQSLLPILEYIEKNISKPRHTAQMVNIANRIVDLYGGDVGAS
SAVDNALRRIQLKIKAQLRLHEALTQLQGMALTI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgagtaccgaaaacttccaatcaaacgctacgccgcgcgagcgaagcgagagacg
ggcgagggaaggtactggcgagaatataaatccaccgcgctgagcgaacaggtgaacgcg
gtgacgagcgtgtcgtacggaggcgcggggtcgtcggggggcgaacgcggcgcgttggcg
gcgacgagcggggcgagggtgacgctgtacgcgccgagcggagcgagaaaattgaggacg
ttcgcgcgatttaaggacgtggcgtacagtggtgtgctgagagacgatgggaaggcgctg
gcggtcggaggacaggctggggtggtgcagttgtttgattgcgggtcgcgagcggttttg
agaaagtttacgacgcactccgcggcggttcgcgcggtgcgatggagcgcggataagctg
cacttagggtcggcgagcgacgacgcgacggtgcgaatatgggatatttccactgggaat
tgcgtgcgaaggcacgatgggcacacggattacgttcgagcgctcgagcggagtacggtt
tctcaagagatgtgggcgagcgggtcgtacgaccacacggtgaaaatttgggacgctaga
caaggacgcgaggcggtgatgacgctcgatcatggttcgcccgtggaagatgtcgcgtgg
tatcccaacggaaacttgctcgtctccgtcggtggcgaggacgtgtgcgtgtgggacgcc
atcggcggcggccggttgcttcgtcggttgcgcagtcaccagaagaccatcaccaccatc
ggtagcgaaagcgcgctcgaatcaaacgcgcctcgcatgatcaccggctccttggacggc
ttcgtcaagattcacgaactcgacactttcaccgtgacgcactcgatcaagtaccctgga
cccgtgctgacgtgctcgctctcgccagacgcgaactgccttgccactggactagccaat
aaagtattgagcgttcgcagacgaacgaaacctcgtaacagtgacgacccttcggggtat
caaggcgttcgaagtaaaaagaagggcttcacggtgaagaaacctcgacgactggatgcg
agtcattggcggtactttattcgaggtcaaaactctaaagcggcggcagacgccacgcga
gtgcttcgtcgacgacgtgtgcacttggccgcgcacgatcgaatgttgaaacaatttaga
tacggagacgccctggacgcggcgttgcacgtgggtagggcggaagttgtcgccgcagtc
atagaagaagtcggtcgaagaggggggcttcagaaggcactcgccaaccgcgacgaccag
tcgctgcttccgattttggagtatatagagaaaaatatctccaagccgcgccacacggcg
cagatggtgaacattgcgaaccgaatcgtcgacttgtacggtggcgacgtcggcgcgagt
tcggctgtggacaacgcattgcgtagaatccagttgaaaatcaaagcgcaactgcgacta
cacgaagcattgacgcagttacaagggatggctttgacgata
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