Ostreococcus lucimarinus: OSTLU_24368
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Entry
OSTLU_24368 CDS
T01029
Name
(RefSeq) predicted protein
KO
K18721
nucleoporin NUP1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_24368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_24368
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OSTLU_24368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
5001608
NCBI-ProteinID:
XP_001417174
JGI:
24368
UniProt:
A4RVN6
LinkDB
All DBs
Position
4:201149..204226
Genome browser
AA seq
1025 aa
AA seq
DB search
MTPSSNDGRASDETREAPSSNAKTMWRKVATPVRSATKIASALVGGFFWQGEDEGDGFEG
GAKENRTMDVGRAMDEEQSVRTRGNGAGGARAGTTTTTGRIGEVGGATRTTRFANEAAAA
ETASDSPTPFTEIREFLRRGQMDRERMARSSAGGAYGEISAAVKPPSPFERAPAFDAHAT
PARERPMVAQMATPGTTGVGASSPGYASVRRSYGASGTPSLLGTRGRTAIKPTILEPPME
QTPTPPRASLKRDRELTIMDLERERARVTTPRRLESAAHSPGPGALARESASPAYHTPSA
KPVTSAVTTDTAKRILQTLDRLAGARTATPMGVAAARPSLFATRPTQPVQAPSPVGAAFD
KQVTPTSATFVATPKSGVSFATSPMPFISASSSGRAPTTPYPTSAEPEIETPNFKFGEDS
TLLATGKKPKAPSGPVASVPIKFTFGEGQTTPLFTKKSVAAAPVKTTTTVPPPPAQPTAV
TQKSEEAPAASKPVMNLWSADFLAKNQEHQKKVQAAIEEEEKAASKPPAPSPFAPSAPAG
DKPAFSFGIHAASSAPAPSTDASGFTFGSTAPAAPTSAPASAPAFSFGSTAPVKPAETTE
VKKPAGESGLLAFLGASSSEAKTASEPATAPTFTFGAPPKSPDNVPVKVPDPAPAFSFGG
ETKAPESSKPASAPFTFGTATPAAAAAPALFTFGAKPVEKAAEPEKEKSQLSASAPAFSF
AAGSKKEDEPKAAETAKPFTFGAAPALDATKPAGDALFSFGGASAEKKEEQPKPASGGFS
FGATAAPAFGAASSAVKEDAKPVSAPFVFGGASTTPASSGGFTFGASAPPAAPASGGGFT
FGAASSTTAASTPFGGGLSVNTGKPAASVFGQPPKPDEQPNTPEPMSPFESSKSPLGAAS
TGSSLFGGASTNSFAAPPASSAPSTNPFGGGGANPFAGASAGVTNPFGGASSTPAFGGAA
APFGGASASANPFGGVAAPAPAVPAPNPFGANPAPAGGFSLGAGDESSQGGRKPPRKFKR
PPPRR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtcgtcgaacgacggtcgcgcgagcgacgaaacgcgcgaagcgccgtcgtcg
aacgcgaaaactatgtggcgcaaggtggcgacgccggtgcggagcgcgacgaagatagcg
tcggcgctggtgggtggattcttttggcagggcgaggacgagggcgacggcttcgagggc
ggggcgaaggagaatcgaacgatggacgtcggacgagcgatggacgaggaacagagcgtg
agaacgcgtggaaacggtgcgggaggagcgagagcgggtacgacgacgacgacggggcgg
atcggggaggtcggcggcgcgacgaggacgacgcggttcgcgaacgaggcggcggcggcg
gagacggcgagcgattcgccgacgccgttcacggagatcagggagttcttgcgccgagga
cagatggatagagagcgaatggcgcgatcgagcgctggcggggcgtatggcgagattagt
gcggcggtgaagccgccgtcgccgtttgagcgcgcgccggcgtttgacgcacacgcgact
ccggctcgggagcgtccgatggtggcgcagatggccacgcccggaacgacgggtgtgggc
gcgagttctccgggatacgcgtccgtgcgtcgatcgtacggcgcgtcggggacgccatcg
cttctcggtacgcgcggtcgcacggcgataaaaccgacgattctggaaccgccaatggag
cagacgccaacgccgcctcgcgcgagcttgaagcgtgatcgtgagctgactatcatggat
cttgagcgtgagcgagcgcgcgtgacgacgcctcgacgattggagtccgccgcgcacagc
cctggtccgggagcgctggcgcgagagtctgcgagtccggcgtaccacactccctccgcc
aagccagtgacgagcgcggtgacgacggatacagcgaaacgtatattgcaaactttggat
cgcttggcaggtgcgcgaacggcgacacctatgggtgtcgcagcggcgagaccttcgttg
tttgcgactagacccacgcaacctgtgcaagcgccgtcgcccgtcggcgccgcgtttgac
aagcaagtcacgccgacatcggctacctttgttgcgactcccaaatcgggcgtttctttt
gcgacttcgccgatgcccttcatcagtgcatcctcgtctggtcgcgcgccgacgacgccg
tacccgacgagtgccgagcctgagattgagacgccaaacttcaagttcggcgaagatagc
accttgctcgccaccggtaagaaaccaaaagcgccgtccgggcctgtggcttctgttccg
ataaagttcacgttcggagaaggtcaaacaactccgttgtttacgaagaaatccgtcgcc
gcggcgccagtgaaaacaacgacgacggtgccaccgccgccggcgcaaccgacggcggtc
acgcaaaagtcggaggaagcgcccgctgcgagtaaacctgtcatgaatctctggagtgcg
gatttcttggcgaagaatcaagagcatcaaaagaaagtgcaagcggcgatcgaagaagaa
gagaaagctgcgagcaagccgcctgcaccgtcgccgtttgcgccgtctgcccctgccggg
gacaagccggcgttctcgttcggtattcacgctgcgagcagcgcgcccgcccctagcact
gatgcgtccgggtttactttcggttccaccgcgcccgcggcgccgacctcggcgccggcc
tcggcgccagcgttttcttttggatccacggcaccggtgaaaccagcggaaaccaccgaa
gtgaagaaaccggcgggagagtctggtttactcgcgtttttgggcgcgtcttcgagcgaa
gctaaaacagcaagtgaacctgcgactgcgcccacgttcacatttggcgcgccacccaag
tcgcctgataatgtgcccgtgaaagtacccgatcctgcgcccgcgttttccttcggcggc
gaaaccaaagcgccagaaagttcgaaaccggcgagcgcaccgtttacgttcggcacggcg
acacccgccgcagccgcggcgccggcgctgtttacgttcggggcgaaaccggtagagaag
gcggccgaaccagagaaggaaaaatcacagctttcggcgtccgcgcccgctttttcgttt
gccgcggggtcgaagaaggaagatgaaccgaaagcggcggagactgccaagccgttcacc
tttggcgccgcaccggcgctggacgcaacgaagcccgcgggggacgcgttatttagcttt
gggggtgcttcggcggagaagaaagaagaacagccgaaaccagcgagcggcggatttagc
tttggggccacggcggcgcccgcgttcggagctgcatcatcggcggtaaaggaggacgcc
aagcccgtgagcgcgccgtttgtgtttggcggtgcgtcaaccacgcccgcttcgagcggc
ggattcacctttggtgcctctgcgccgccagccgcaccggcgagcggtggtggcttcacg
tttggtgccgcttcgagcactaccgcggcttcgacaccattcggcggcggtttaagcgtg
aacactggtaaacccgcggcgagcgtcttcggtcaaccgccgaaaccggacgagcaacca
aatacccctgaaccgatgagtccgttcgaatctagcaagtcgcctctaggtgccgcatca
actggtagttccctgttcggtggtgcgtccacgaatagttttgccgcccctccggcgagc
agcgcgccgtcgacgaatccgtttggcggcggcggcgcgaatccgttcgccggcgcgtcg
gcaggcgtgacgaacccattcggtggtgcaagctcaacgcccgcgttcggcggcgctgct
gccccattcggtggtgcgtcggcgagtgccaaccctttcggcggcgttgccgcgcccgca
cccgcggttccagcgccgaatccgttcggcgccaaccccgcgcccgctggcggcttctcc
ctgggcgccggcgacgagtcctcgcagggcggaagaaagccaccgcgcaagttcaagcgc
ccgccgccgcgccgataa
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integrated database retrieval system