Ostreococcus lucimarinus: OSTLU_24669
Help
Entry
OSTLU_24669 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12830
splicing factor 3B subunit 3
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_24669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_24669
03041 Spliceosome [BR:
olu03041
]
OSTLU_24669
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_24669
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
OSTLU_24669
Spliceosome [BR:
olu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
OSTLU_24669
Complex B
OSTLU_24669
Complex C
U2 SnRNP specific factors
OSTLU_24669
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
OSTLU_24669
TFTC complex
OSTLU_24669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
5002327
NCBI-ProteinID:
XP_001418451
JGI:
24669
UniProt:
A4RYT7
LinkDB
All DBs
Position
6:complement(336738..340328)
Genome browser
AA seq
1196 aa
AA seq
DB search
MVHLYNLTLQKSSGINAAVYGNFSASKAQEIVVLRNKVVELLRPDESGRVQSVTSVEAFG
IARSIATLRLAGANRDYLVLGSDSGRVVVLQFDKEKNAFVKVHQETYGKTGCRRIVPGQF
LCADPKGRAICLGAVEKNKLVYVMNRDNEANLTISSPLEANKSHTIVFHMCALDCGLDNP
IFAAIELDYGDADADPSGEAVAEAQKHLTYYELDLGLNHVVRKWSEPIDNGANHLIPVPG
GSDGPGGVLVCCENFVIYRHQNHDEVRAVIPRRNSLAADRGVLIVSSASHRSKNSFFFLA
QSEYGDIYKLTIDYSGETVSEVKVKYFDTIPPCVSLCVLKTGFLFAASEFGNHALYQFAG
IGDDDAVESSSASLMETEEGYEPVFFDPRPLTNLYTIDTIDSLCPVLDMQAHNLTEEEMP
QLYTLCGTGARSSLRILRQGIAMNELAMSPLPGQPNAIFTVKKSSSEEYDSYIIVSFLNA
TLVLSIGDTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIKADKRINEWRTPGR
KQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETSGDIACLDIGPVPEGALRN
RFLAMGSYDGTVRVMSLNPDDCLQTLAVQALKGSAPSSLLVLQTAGTESTQGGLLLNVGM
ANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGYSEKGTF
VLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVKLRYTPRAMS
ANPDTKMVALIESDQCTVPVGEREGPEATPADEAPETNDEDEEEAKMLPVEQFGAPKSSP
GTWAACVRIVDPKEAKSTFVLELHKSEAALSLCHVFLTGPNELLLAVGTAVNLTFAPRNC
DGGFIHLYRYGNDGRTLNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYDYGKKKLLRK
VENRNFPNFITTLHAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLD
YDTLAGADKFGNIFVNRLPKDVSEDMDDDPTGGKNIYSQGVLNGAPNKSETSAQTYIGET
VCALTKGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFTHLEMHMRQEAPSIVGRDH
MAFRSYYAPVKNVIDGDLCEQFGALPADVQRRIAEEMDRTPGEILKKLEQVRSVAI
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacttgtacaatctcacgctgcagaagtcgagcggaatcaacgccgcggtgtac
ggaaacttcagcgcgagcaaggcgcaggagatcgtggtgctgcgaaataaggtcgtcgag
ctgctgcgaccggatgagagcggacgggtgcagagcgtgacgagcgtggaggcgttcggg
atcgcgcggtcgatcgcgacgctgcgcctggcgggagcgaatcgagattatctcgtcctc
ggaagcgacagcggtcgggtggtggtgctgcagtttgataaggaaaagaatgcgttcgtg
aaggtgcatcaggagacgtatgggaagacgggatgccgaaggatcgtgccggggcagttt
ttgtgcgcggacccaaaggggcgagccatttgtctgggcgcggtggagaagaataagctg
gtgtacgtgatgaacagagataatgaggcaaacttgactatttcatcaccgcttgaggcg
aataagtcgcacacgatcgtgtttcacatgtgcgcgttagattgcggattggacaatccg
attttcgcggcgatcgagttggactacggcgatgcggacgcagacccgagtggcgaagcc
gtggcggaggcgcagaagcatttgacgtactacgaactcgatttaggtttgaaccacgtc
gtacgcaagtggagcgagccgatcgataacggcgcaaaccatttgattcccgtgccaggc
ggaagcgacggtccgggtggtgtcttggtgtgctgcgaaaactttgtcatttacagacat
cagaaccacgacgaagttcgggcggtgatcccgcgtcgaaattctttggcggctgatcga
ggggtgttgattgtgtcctccgcgagccacagatcgaagaattctttcttctttttggcg
cagtcagagtacggggacatttacaaactcaccatcgactactccggggaaacagtgagt
gaagtcaaagtgaagtattttgacactattcccccgtgtgtaagcttgtgcgtgttgaag
actggtttcttgttcgcggcgagtgaattcggaaatcacgcgctgtatcagtttgccggc
attggcgacgatgacgcggttgaaagcagctcggcatcgctcatggaaacggaggaaggc
tacgagcccgtattcttcgacccgcgacctttgaccaacttatacacgatcgatactata
gatagtttgtgtcctgtgctagacatgcaggcacacaacttgacggaagaggaaatgcca
caattgtacacgctttgcggaactggcgctcgttcatcgcttcgcattttgcggcaaggc
atcgccatgaacgaattggcgatgagcccacttccgggccagccgaacgccatcttcacg
gtgaagaagagctcgtcggaagagtatgattcgtatatcatcgtctcgttcttgaacgca
acgctggtattgtccatcggagacaccgtcagtgaagtgaacgacagcgggattttagga
actacgacgacgcttcaggcgtgtctcatgagcgatgaatctttacttcagattcatccg
ggcggtttgcgccacatcaaggcggataagcgcatcaatgagtggcgcactcctggacgc
aagcaaatctcaaagtgcacgtgcaacagcaagcaagttgtcatcgcgctcaccggcggc
gaagtgatttactttgagttagattcggccggtcaactcattgaagttgaaaagctggag
actagcggcgacattgcgtgtttggatatcggtccggttcctgagggtgcgctgagaaat
agattcctcgccatgggttcgtacgacggcaccgtgcgcgtcatgagcctcaacccggat
gactgcttgcaaacgttagccgtgcaagcgctcaagggctcggcgccgtccagcttgttg
gtcctccaaaccgcgggtacggagtccactcaaggtggtttgttgctcaatgtgggcatg
gcgaatggcgttttgatacgtgcgacgattgatcaagtttctggacaactgagtgatatg
cgcatgcgctttttaggcgctcgtgcgccgaagcttgttcgtacaagcgttcgtggcgct
ccggctctcgtcgcgttgtcatctcgaccttggttgggatactctgaaaagggaacgttc
gtgctcgcaccaatttcgtacgtcccgctggaagaggtgtgttcgttcaacagcgagcaa
tgccccgaaggcgtcgtggcgatttcaaaccagacgttacgcatcgcgagcatcgagcgt
ttgggcgaaaacttcaaccagaccacggtcaagctccgttacactccgcgcgcgatgagc
gccaatcctgatacgaagatggttgcgctgatcgaaagtgaccagtgcacggttccagtc
ggcgaacgcgaaggtcccgaagcaacgcccgcagacgaagcgcccgaaacgaacgacgaa
gacgaggaggaagcaaagatgctacccgtcgaacagtttggcgcgccgaagagctcgcct
ggaacgtgggcggcgtgcgtacgaatcgtcgatcctaaggaggcgaaatcgacgttcgtg
ctggagctacacaagagtgaagccgcgctcagtttgtgccacgtcttcctgacaggcccg
aatgagttactccttgccgtcggtacggcggtgaacctcacgtttgcgccgcgcaactgc
gatggtggtttcatccatttgtacagatacggtaacgatggtaggacgctcaatttggtg
cactccaccccgacggatggtccggtcggggcgttgtgtggatacaaaggtcacctgctg
gcgggcgtgaacaattcgttgcgcatttacgactacggtaagaagaaactcttgcgcaag
gttgagaacaggaactttccaaacttcatcaccactctgcacgcggcgggagatagaata
tacgtcggtgacgtgcaggagtctattcactacgtcaagtacaaggcggatgagggtagt
atatacatctttgccgacgacacgaagccgcgatacatcacggcgacgctgcctttagat
tacgatacactcgccggtgcggataagtttgggaatattttcgtcaatcgcctaccgaag
gatgtcagtgaggacatggacgatgaccccacaggcggtaagaacatttattcgcaaggt
gtattgaacggtgcgccgaacaagtctgaaacctctgcgcaaacatacatcggggagacg
gtgtgcgcgctcacgaagggcgcactacaaccgggagggatcgagatcatcatgtacggc
actttcatgggcggtatcggatgtttgttaccgttcagctctcgatcggagatcgagttc
ttcactcatttagaaatgcacatgcgccaggaagcgccatccatagtcgggcgcgaccac
atggcattccggtcgtactacgcgccggtcaaaaatgtcatcgacggtgacttgtgcgag
cagttcggcgctttaccggctgacgttcaacggagaatcgcggaagaaatggatcgtacg
ccgggcgaaattctaaagaagctcgaacaagttcgatccgtcgcgatataa
DBGET
integrated database retrieval system