KEGG   Ostreococcus lucimarinus: OSTLU_24669
Entry
OSTLU_24669       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12830  splicing factor 3B subunit 3
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OSTLU_24669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_24669
   03041 Spliceosome [BR:olu03041]
    OSTLU_24669
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_24669
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     OSTLU_24669
Spliceosome [BR:olu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    OSTLU_24669
 Complex B
    OSTLU_24669
 Complex C
   U2 SnRNP specific factors
    OSTLU_24669
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     OSTLU_24669
    TFTC complex
     OSTLU_24669
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 5002327
NCBI-ProteinID: XP_001418451
JGI: 24669
UniProt: A4RYT7
LinkDB
Position
6:complement(336738..340328)
AA seq 1196 aa
MVHLYNLTLQKSSGINAAVYGNFSASKAQEIVVLRNKVVELLRPDESGRVQSVTSVEAFG
IARSIATLRLAGANRDYLVLGSDSGRVVVLQFDKEKNAFVKVHQETYGKTGCRRIVPGQF
LCADPKGRAICLGAVEKNKLVYVMNRDNEANLTISSPLEANKSHTIVFHMCALDCGLDNP
IFAAIELDYGDADADPSGEAVAEAQKHLTYYELDLGLNHVVRKWSEPIDNGANHLIPVPG
GSDGPGGVLVCCENFVIYRHQNHDEVRAVIPRRNSLAADRGVLIVSSASHRSKNSFFFLA
QSEYGDIYKLTIDYSGETVSEVKVKYFDTIPPCVSLCVLKTGFLFAASEFGNHALYQFAG
IGDDDAVESSSASLMETEEGYEPVFFDPRPLTNLYTIDTIDSLCPVLDMQAHNLTEEEMP
QLYTLCGTGARSSLRILRQGIAMNELAMSPLPGQPNAIFTVKKSSSEEYDSYIIVSFLNA
TLVLSIGDTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIKADKRINEWRTPGR
KQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETSGDIACLDIGPVPEGALRN
RFLAMGSYDGTVRVMSLNPDDCLQTLAVQALKGSAPSSLLVLQTAGTESTQGGLLLNVGM
ANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGYSEKGTF
VLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVKLRYTPRAMS
ANPDTKMVALIESDQCTVPVGEREGPEATPADEAPETNDEDEEEAKMLPVEQFGAPKSSP
GTWAACVRIVDPKEAKSTFVLELHKSEAALSLCHVFLTGPNELLLAVGTAVNLTFAPRNC
DGGFIHLYRYGNDGRTLNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYDYGKKKLLRK
VENRNFPNFITTLHAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLD
YDTLAGADKFGNIFVNRLPKDVSEDMDDDPTGGKNIYSQGVLNGAPNKSETSAQTYIGET
VCALTKGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFTHLEMHMRQEAPSIVGRDH
MAFRSYYAPVKNVIDGDLCEQFGALPADVQRRIAEEMDRTPGEILKKLEQVRSVAI
NT seq 3591 nt   +upstreamnt  +downstreamnt
atggtgcacttgtacaatctcacgctgcagaagtcgagcggaatcaacgccgcggtgtac
ggaaacttcagcgcgagcaaggcgcaggagatcgtggtgctgcgaaataaggtcgtcgag
ctgctgcgaccggatgagagcggacgggtgcagagcgtgacgagcgtggaggcgttcggg
atcgcgcggtcgatcgcgacgctgcgcctggcgggagcgaatcgagattatctcgtcctc
ggaagcgacagcggtcgggtggtggtgctgcagtttgataaggaaaagaatgcgttcgtg
aaggtgcatcaggagacgtatgggaagacgggatgccgaaggatcgtgccggggcagttt
ttgtgcgcggacccaaaggggcgagccatttgtctgggcgcggtggagaagaataagctg
gtgtacgtgatgaacagagataatgaggcaaacttgactatttcatcaccgcttgaggcg
aataagtcgcacacgatcgtgtttcacatgtgcgcgttagattgcggattggacaatccg
attttcgcggcgatcgagttggactacggcgatgcggacgcagacccgagtggcgaagcc
gtggcggaggcgcagaagcatttgacgtactacgaactcgatttaggtttgaaccacgtc
gtacgcaagtggagcgagccgatcgataacggcgcaaaccatttgattcccgtgccaggc
ggaagcgacggtccgggtggtgtcttggtgtgctgcgaaaactttgtcatttacagacat
cagaaccacgacgaagttcgggcggtgatcccgcgtcgaaattctttggcggctgatcga
ggggtgttgattgtgtcctccgcgagccacagatcgaagaattctttcttctttttggcg
cagtcagagtacggggacatttacaaactcaccatcgactactccggggaaacagtgagt
gaagtcaaagtgaagtattttgacactattcccccgtgtgtaagcttgtgcgtgttgaag
actggtttcttgttcgcggcgagtgaattcggaaatcacgcgctgtatcagtttgccggc
attggcgacgatgacgcggttgaaagcagctcggcatcgctcatggaaacggaggaaggc
tacgagcccgtattcttcgacccgcgacctttgaccaacttatacacgatcgatactata
gatagtttgtgtcctgtgctagacatgcaggcacacaacttgacggaagaggaaatgcca
caattgtacacgctttgcggaactggcgctcgttcatcgcttcgcattttgcggcaaggc
atcgccatgaacgaattggcgatgagcccacttccgggccagccgaacgccatcttcacg
gtgaagaagagctcgtcggaagagtatgattcgtatatcatcgtctcgttcttgaacgca
acgctggtattgtccatcggagacaccgtcagtgaagtgaacgacagcgggattttagga
actacgacgacgcttcaggcgtgtctcatgagcgatgaatctttacttcagattcatccg
ggcggtttgcgccacatcaaggcggataagcgcatcaatgagtggcgcactcctggacgc
aagcaaatctcaaagtgcacgtgcaacagcaagcaagttgtcatcgcgctcaccggcggc
gaagtgatttactttgagttagattcggccggtcaactcattgaagttgaaaagctggag
actagcggcgacattgcgtgtttggatatcggtccggttcctgagggtgcgctgagaaat
agattcctcgccatgggttcgtacgacggcaccgtgcgcgtcatgagcctcaacccggat
gactgcttgcaaacgttagccgtgcaagcgctcaagggctcggcgccgtccagcttgttg
gtcctccaaaccgcgggtacggagtccactcaaggtggtttgttgctcaatgtgggcatg
gcgaatggcgttttgatacgtgcgacgattgatcaagtttctggacaactgagtgatatg
cgcatgcgctttttaggcgctcgtgcgccgaagcttgttcgtacaagcgttcgtggcgct
ccggctctcgtcgcgttgtcatctcgaccttggttgggatactctgaaaagggaacgttc
gtgctcgcaccaatttcgtacgtcccgctggaagaggtgtgttcgttcaacagcgagcaa
tgccccgaaggcgtcgtggcgatttcaaaccagacgttacgcatcgcgagcatcgagcgt
ttgggcgaaaacttcaaccagaccacggtcaagctccgttacactccgcgcgcgatgagc
gccaatcctgatacgaagatggttgcgctgatcgaaagtgaccagtgcacggttccagtc
ggcgaacgcgaaggtcccgaagcaacgcccgcagacgaagcgcccgaaacgaacgacgaa
gacgaggaggaagcaaagatgctacccgtcgaacagtttggcgcgccgaagagctcgcct
ggaacgtgggcggcgtgcgtacgaatcgtcgatcctaaggaggcgaaatcgacgttcgtg
ctggagctacacaagagtgaagccgcgctcagtttgtgccacgtcttcctgacaggcccg
aatgagttactccttgccgtcggtacggcggtgaacctcacgtttgcgccgcgcaactgc
gatggtggtttcatccatttgtacagatacggtaacgatggtaggacgctcaatttggtg
cactccaccccgacggatggtccggtcggggcgttgtgtggatacaaaggtcacctgctg
gcgggcgtgaacaattcgttgcgcatttacgactacggtaagaagaaactcttgcgcaag
gttgagaacaggaactttccaaacttcatcaccactctgcacgcggcgggagatagaata
tacgtcggtgacgtgcaggagtctattcactacgtcaagtacaaggcggatgagggtagt
atatacatctttgccgacgacacgaagccgcgatacatcacggcgacgctgcctttagat
tacgatacactcgccggtgcggataagtttgggaatattttcgtcaatcgcctaccgaag
gatgtcagtgaggacatggacgatgaccccacaggcggtaagaacatttattcgcaaggt
gtattgaacggtgcgccgaacaagtctgaaacctctgcgcaaacatacatcggggagacg
gtgtgcgcgctcacgaagggcgcactacaaccgggagggatcgagatcatcatgtacggc
actttcatgggcggtatcggatgtttgttaccgttcagctctcgatcggagatcgagttc
ttcactcatttagaaatgcacatgcgccaggaagcgccatccatagtcgggcgcgaccac
atggcattccggtcgtactacgcgccggtcaaaaatgtcatcgacggtgacttgtgcgag
cagttcggcgctttaccggctgacgttcaacggagaatcgcggaagaaatggatcgtacg
ccgggcgaaattctaaagaagctcgaacaagttcgatccgtcgcgatataa

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