KEGG   Ostreococcus lucimarinus: OSTLU_26071
Entry
OSTLU_26071       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_26071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_26071
Enzymes [BR:olu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     OSTLU_26071
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     OSTLU_26071
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     OSTLU_26071
SSDB
Motif
Pfam: Exo_endo_phos IG_AIR9 zf-C6H2 DUF7632 PDE12-like_N
Other DBs
NCBI-GeneID: 5004260
NCBI-ProteinID: XP_001420103
JGI: 26071
UniProt: A4S3J0
LinkDB
Position
10:complement(176886..178622)
AA seq 578 aa
MSLTVTRATLNTDTPIVGVELAPYIVTRKSDGTSTTEDIGKENAHEGSYVRYRWFRSGKK
TKMNVCSVHPAEQATLLNIATRTYHCDSECFKHAWREWNRNRIANGEPFPTKADRASPKD
DVDGWKAAKAERAEDKPDEKKRVEPWIEVCQTRNYTVSADDVGHVLKLEVVPVDAKSGNE
QAQPQNVITGRVIPAPEPPRRNLVKISHNSTPEPRTFTVATYNVLADLYCNSDMYGYVPD
WALAWAYRRQNILKEIVNYNADILCLQEVQSDHYEDFFQGEMAKYGYASVYKKKTAQVFS
EGKFVIDGCAIFFKKDKFALIKKYEVEFNKAALSLVESLGGATQKKDALNRLMKDNIALI
VVLEALDVDQQLLQGKRQLLCVANTHIHANTEHNDVKLWQVHTLLKGLEKIATSAEIPMV
VCGDFNSVPGSAAHSLLSNGRVPADHPELGIDPFGILQPSTKLSHPLPLVSAYTNLHKPC
LDSEALERQRDRVDVIGEPLFTNCTKDFNGALDYVFYTEDALAPVSLLELPGEREVRAKY
GGLPNTQWSSDHVCLMTEFQWGARMDPNSPSAYGPRYM
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgagtttgaccgtgacgagggcgacgctgaacaccgacacgcccatcgtcggcgtggag
ctcgcgccgtatatcgtgacgcgtaagagcgatgggacgtcgacgacggaggatatcggt
aaggagaacgcgcacgaggggagttacgtgcggtatcgatggtttcggtcggggaagaag
acgaaaatgaacgtgtgctcggtgcacccggcggaacaggctacgcttctgaatatagcg
acgcgcacgtatcactgcgattccgaatgcttcaagcacgcgtggcgagagtggaatcgt
aaccggatcgcgaatggggagccattcccgaccaaggcggatcgagcgtctccgaaggat
gacgtcgatggatggaaggcggcaaaggcggagcgggcagaggacaaacccgatgagaag
aaacgagtggagccttggattgaagtttgtcagacgaggaactatacggtgagcgcggat
gacgtcgggcacgtgttgaagttggaagtcgtacccgtggacgcgaagagtgggaacgag
caagcgcagccgcaaaatgtgataaccggcagagtgattccagcgccggagccaccgaga
aggaatttggtgaagatttcgcacaatagcactccagaacctcgcactttcacggtggcg
acgtacaacgtgcttgctgatctatactgtaacagcgacatgtacgggtacgtccccgac
tgggcgttggcgtgggcgtaccgccgacagaacatcttgaaggagattgtcaactacaat
gcagatattctttgcttgcaggaagtgcaatccgaccactacgaggacttttttcaaggt
gaaatggccaagtacggttacgcttcagtttacaagaagaagacggcgcaagtgttcagt
gaagggaaatttgtcatcgacggctgcgccatcttcttcaagaaggacaagtttgcgttg
attaagaagtacgaggtagaattcaataaggctgcgctgagtctggtcgagtctctcggc
ggagcgacgcagaagaaggatgcgctaaaccggttgatgaaggataacatcgctctcatc
gtcgtcctcgaggcgttggacgtggaccagcaactgttgcaagggaaacggcagttgcta
tgcgtggcgaatacgcacattcatgccaacaccgagcacaacgacgttaagttatggcag
gttcacacgttgctcaagggtttggaaaagattgcgacgtctgcggaaattcccatggtg
gtgtgcggagatttcaactcggttccaggatcggcggcgcactcgctcctgtcgaacggt
cgcgttcccgcggaccacccagaacttggcatcgatccttttggaatcttgcaaccgtct
acgaagttatcgcacccgcttccgctcgtgtcggcgtacactaacttgcataaaccatgt
ttggattcagaggcgctggagcgccagcgcgaccgtgtggacgtcatcggcgagccgttg
ttcaccaattgcaccaaagacttcaacggtgcgctggattacgtcttctataccgaagac
gccctcgcgccggtgagtttacttgaacttcccggtgagcgcgaggttcgcgccaagtat
ggtggtttacccaatacgcagtggtcgagtgaccacgtctgtctgatgacggagttccaa
tggggagcgcgcatggatccaaactcgccgtcggcgtacgggccgcgctacatgtga

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