Ostreococcus lucimarinus: OSTLU_26974
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Entry
OSTLU_26974 CDS
T01029
Name
(RefSeq) predicted protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_26974
03015 mRNA surveillance pathway
OSTLU_26974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_26974
03041 Spliceosome [BR:
olu03041
]
OSTLU_26974
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
OSTLU_26974
Spliceosome [BR:
olu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
OSTLU_26974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
FkbO_Hyg5-like_N
Motif
Other DBs
NCBI-GeneID:
5004865
NCBI-ProteinID:
XP_001420716
JGI:
26974
UniProt:
A4S634
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All DBs
Position
12:526803..527432
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AA seq
209 aa
AA seq
DB search
MSTYRQPFSRGAAAFGKRPSSSSSANAKLAEALKVKIDIDKVDLEVIKPWISREITALLG
VEDEVLIGMIEVLLEECKIHKNGAHMYAQLESFLEKQTETFCVQLWELLASAQANAGKHG
EKGVPSKFMKDTEAQRKREDEAYERMKKNQERGRDGRRSQQKPYDRPPRRHSRDRVGRGQ
ERRRDSRSPPRRRSRWGADGERSDGSDDA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtacagacaaccgttcagccgcggtgccgcggcgttcgggaaacgaccgagc
agctcatcgagcgccaacgccaagctcgccgaggcgctcaaggtgaaaattgacatcgac
aaggttgatttagaagtcatcaaaccgtggatctcgcgcgagatcaccgcgctgttgggg
gtggaggacgaagttttgatcggcatgatcgaggtgttgctagaagagtgcaagattcac
aagaatggcgcacacatgtacgcgcagttggagtcgtttctcgaaaagcaaaccgaaacg
ttttgcgtgcaactgtgggagctcttggcgagcgcacaggcgaacgcgggcaaacacgga
gagaaaggcgtgccatcgaaattcatgaaggataccgaggcgcagcgcaagcgcgaggac
gaggcgtacgagcgcatgaagaaaaatcaggaacgcggtcgcgacggtcgacgttcgcag
cagaaaccgtatgaccggccgccgcgacgacatagcagagatagggtaggacgcggccaa
gagaggcgacgggattctagaagtccgccgcggcgacggtcgcggtggggcgccgacggt
gagcggagcgacggcagcgacgacgcgtga
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