Ostreococcus lucimarinus: OSTLU_27024
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Entry
OSTLU_27024 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14617
LMBR1 domain-containing protein 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
OSTLU_27024
04980 Cobalamin transport and metabolism
OSTLU_27024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
olu04131
]
OSTLU_27024
Membrane trafficking [BR:
olu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
OSTLU_27024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
UPF0239
DUF4831
Motif
Other DBs
NCBI-GeneID:
5005075
NCBI-ProteinID:
XP_001420900
JGI:
27024
UniProt:
A4S681
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All DBs
Position
13:join(85791..85819,86045..87611)
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AA seq
531 aa
AA seq
DB search
MSAPSESYNWFLIVVAIVVTALALACNVYVLVHFQHPDDRNQAWFPKIVVVTGLTLSVLS
ILLLPLDVANRAACDEAIIESACRYTLPMEDFWYATYLTMFAYMFVLVPWTLFYYEQDSE
ATLGKKLVSSSIWSVATLFVLLMAMLLAYYVGGEAEFELKSVKSGMALIGNSALNGATSC
IALPSSPTTVTNFATYTATMSGMDCDAYGPNVGTETFTVRPTFIVYMIAVASIISWFIFL
VYAGVGIVALPVDMIKGFMNRPQKVIPKSEYIRCATILARDAQAIHQQIKNVQKEQRETG
RTKKTKKDLKELQVKLSQLEDDEVELMTVFPQGEQREATWLMTVLAYYIQCFLGGLSVIL
STLWTLHIIITVLVKPAAHPFLNSFFIWLDSGWSLLGTAAFALFCFYLVFCVIKGNTRLG
LRFFFMKLYPMKLGRTSMSSLLFNTGLIMLGSISIVQFCAQVFNVYAAETAVTDIFGGNI
ENLKGLGYLFKYNVFIYSFFAMICLSCIIIPFETWKTPKPKKTWERDSGRI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgagcgagagctataactggttcttgatcgtcgtggcgatcgtggtgacg
gcgctggcgctcgcgtgcaacgtctacgtgctcgtgcactttcaacacccggatgatcgc
aatcaggcgtggtttccgaagatcgtcgtcgtcactggattgacgctgtcggtgttgtcg
atattgttgctgccgctggacgtggcgaacagagcggcgtgcgatgaagcgattatagag
agcgcgtgtcggtacacgctgccgatggaggacttttggtacgcgacgtatttgacgatg
tttgcgtacatgttcgtcttggtgccgtggacgttgttttattacgagcaagattccgag
gcgacgctcggaaagaagctggtgagctcgtcgatttggagcgtggcgacgctgtttgtt
ttgttgatggcgatgttgctggcgtattacgtgggcggcgaagccgagtttgagttgaag
agcgtcaagtcagggatggcgttgattggcaactcggcgttgaatggtgcgacgtcatgt
atagcgttaccttcatcgccaacgacggtgacgaatttcgcgacttacaccgcgacgatg
agcgggatggattgcgacgcctacggcccaaacgtcggaacggaaacgttcaccgtccga
ccgacgtttatcgtgtacatgatcgccgtggcgtccattatatcctggttcattttctta
gtgtacgctggcgtcggcatcgtcgccctgccggtggatatgatcaaggggttcatgaac
cgtccgcaaaaagtcatcccgaagagcgagtacattcggtgcgcgacgattttagctcgt
gacgcgcaagcgatacatcagcaaattaagaacgttcagaaggagcagcgcgaaactgga
cggacgaaaaagactaaaaaagatttgaaagagcttcaggtgaagctctcccagctcgag
gatgacgaagtggagctgatgactgtgtttccgcaaggcgaacaacgcgaggccacgtgg
ttgatgactgtgttagcgtactacatacagtgcttcctcggtggcttgagtgtcatcttg
agcacgctgtggacgttacacatcatcatcacagtgctcgtcaagcccgcggcgcacccg
ttcctgaactcgttcttcatatggttggatagtggttggtcgctcctcggcacggctgcg
tttgcgctgttttgcttttatttggtgttttgcgtcatcaagggtaacacacggttgggt
cttcgattctttttcatgaagttgtatcccatgaaattaggtcgcacgagcatgagttcg
ttgctgttcaacacaggattgattatgttgggctcgatttcaatcgtgcaattttgcgcg
caagtcttcaacgtttacgcggctgaaacggcggtgacggatatcttcggcggcaacatc
gaaaacctaaaaggtttaggatatcttttcaagtacaacgtgttcatatactcgttcttc
gcgatgatttgtttgtcatgcatcatcattccatttgaaacatggaaaacgccgaaaccg
aaaaaaacttgggaaagagactcgggtcgcatctag
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