Ostreococcus lucimarinus: OSTLU_27138
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Entry
OSTLU_27138 CDS
T01029
Name
(RefSeq) predicted protein
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_27138
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
OSTLU_27138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR35_TULP_N
CDC45
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
5005159
NCBI-ProteinID:
XP_001421102
JGI:
27138
UniProt:
A4S6J1
LinkDB
All DBs
Position
13:complement(267609..269252)
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AA seq
547 aa
AA seq
DB search
MDEDGAGGFARRSRNIFADAQRRQWCRERQIGERRGGAASAKTGATALRCSNKRFVEELR
LRETLEKHGGCVNCVSWNDDASLLISGSDDMTVCVWGCGAKMPLKGSAFTGHTHNVFASE
FVPQSNSAYCVTTSADGDVRLVDLERGFRGPAPAHYGYRLRGANQPNSECSRSLWHGRGA
GMGFGMTFVPNEPNTFLSCHQDGRVRLFDLRQSHGGFEGNSHEIVVDLSACGPTSEIVFD
PTAPTTFAACSDDPHVRVFDLRHVKSNRREAARECPAAPSPSTSPTGQPMFLRSPRPSMN
HDIPCVMMLSPLELGRGVRSPGFEGISGLAYSSKGELAINCKGDDVYLLDTRRAAANINS
EERIFKSFSVPWEMPITHQAAKRYVGRRNVKTFLKGVAFMCDDEYVTTGGDDGNVYVWHK
DTCELVCKMQADSQVVNTVLPHPHLPTIVCCGIDNHVRVFEAGDGGVHLGTPPMRDEHDA
WGFDEEDDEEEEDTDEDDEDEASTDSDDDHRGENLARWSRALVDAADAPEEDDDDDADFE
PDSMREN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacggcgcgggaggattcgcgcgacggagtcgaaatatattcgccgacgcg
cagcgacggcagtggtgcagagagcggcagatcggggagcgacggggaggcgcggcgagc
gcgaagacgggggcgacggcgctgcggtgctcgaataagcgcttcgtggaggaattgagg
ctgagggagacgctggagaagcacggtgggtgcgtgaattgcgtgagttggaacgacgat
gcgtcgctgttgatctctgggagcgatgatatgacggtgtgcgtgtgggggtgcggggcg
aagatgccgctgaaggggtcggcgttcacggggcacacgcacaacgtcttcgcgagcgaa
ttcgtgccgcaatcgaacagcgcgtactgcgtcacgacgtccgcggatggagacgtgcgg
ttggtggatttagagcgtgggtttcgagggcccgcgcccgcgcattacggttatcgcctg
cgcggggcgaatcaaccgaattccgagtgcagtcgctcgctctggcacggtcgaggcgcg
gggatggggttcggcatgacgttcgtgccgaacgaaccgaatacgtttttgtcgtgccat
caagacggtcgcgttcgtttgttcgacttgaggcaaagtcacggtggtttcgaaggaaac
tcacacgaaatcgtcgtcgatttgagcgcgtgcgggccgacgtcggaaatcgtgttcgac
ccgacggcgcctacgacgttcgccgcgtgctcggacgatcctcacgtgcgcgtgtttgat
ctcagacacgtcaagagtaaccggcgagaagcggcgcgcgaatgtccagcggcaccgagt
ccgagcacgtcgcccacgggtcaaccgatgtttctgagatcgcctcggccttcgatgaat
cacgacattccgtgcgtcatgatgctcagtccgctcgagctcggtcgaggcgtgcgaagc
ccgggctttgagggtatatctggcctggcttactcgtccaagggcgaactcgcgattaac
tgcaaaggcgacgacgtgtacctgttggacactcgccgagcggcggcgaatatcaattct
gaggaacgtatttttaagtcgttctccgtgccgtgggaaatgccgatcacgcatcaggcg
gcgaagaggtacgtcggacgcagaaatgtgaaaaccttcttaaagggtgtcgcttttatg
tgcgacgatgagtacgtcacgacgggtggtgacgatggcaacgtatacgtctggcacaaa
gatacgtgcgagctcgtgtgcaaaatgcaagcagacagtcaggtggtgaacaccgttttg
ccgcacccgcacttgccgaccatcgtgtgctgcggtatagacaatcacgtgcgcgtcttc
gaagctggtgatggtggagtgcatctcggcacccctcccatgcgcgatgaacacgacgct
tggggatttgacgaagaagatgacgaggaagaagaagatacggatgaagacgatgaagac
gaagcgagcaccgatagcgacgacgaccaccgcggcgaaaatctcgcgagatggtctcga
gcgctcgtcgatgctgcggatgcgccagaagaggatgacgacgatgatgccgactttgaa
cctgattcgatgcgcgaaaactaa
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