Ostreococcus lucimarinus: OSTLU_27511
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Entry
OSTLU_27511 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_27511
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
Other 90S particles
OSTLU_27511
Pre-60S particles
Other pre-60S particles
OSTLU_27511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Tti2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
5005593
NCBI-ProteinID:
XP_001421462
JGI:
27511
UniProt:
A4S7J4
LinkDB
All DBs
Position
14:complement(join(412842..413222,413266..414576,414632..416890))
Genome browser
AA seq
1316 aa
AA seq
DB search
MRVNATSVFAAAFGALERASARAGTDGSEDALEALEAVCACAAEAAADVDGRVIRAKMER
TIEVVMGCGRVVSERSPKSMRHVARLLASCAAAAATTKGESGGETSEKHGKRAFQATLNL
SIDGRPKVRKAAVHALGDVVRRVRGDAARAAAYGEMTAAFARKIGEAPERAAAEMQKARG
AAGAKDARARATAAATEALYMLGAMKVLLPELAEPACGACADACAGLLDLDEPLLTQHAT
EALLALANSPTMDADDGSEGVSADTIVGLMAPIAAVANANLNTAPTMVISLARLLSRAQC
KLHAIDAQASAKALPTTFHSLVKLFASPHEGVATEVAEALISLVRSCIDSGMVQEGIKAI
ASARAAGKSAPSKPTTLMSVASSIESAIGFRYRGAWAVSIPVATCAFMRLGPASGPILAG
TLNALGEMGEHASELMCKQQLQDCITAAIQAIGPEQVLASLPLKLEEAIDAELANRQGDG
DGMEVDEQDVMNAASQETGRLWLVPLLRSGLVGANMGFFADAILPQARALGARAEHARNS
QSSYEAQRCGAAEHALWSLFPAFANWPSDASDAFPLIAKDLGNALSSRIDLQGPICVGLK
RLIRQGRIGAGVYEVDDDDEAGDGASTIAAGEPNDDQMPATFTVDIAEAQLAAVSKYARN
FLPILFNLFVSSPTSRRGELSHTIGAFAKVTDQAQLGGFFRTVLRKLVKVTADDPGAPDA
LVEGGDDKTARRCTFMDLVFALVSGLDDQGLEMRAYKLLNELCEAQDGKWLEPRAAEIEE
LLVSGVDCCLPSARRYRLKVIGKILPALQERDAAADAEEGGDGAGSIAETGSLTVLLSEL
ILATKETNARTRTLAYQLLISIPRSIERKNAEAARGVARSGNAGVAAWLGAATEEEDDEA
METEQMGVGVRRFFLTVLAGIVGSSPQMQSATIMALARLLYEFSSALVSTVPELLPAVCA
LLEGKSREVVKSCLGFVKVVVVRLPQQDLAAELPRLVPALLHWSEDSKNRFKLKVRVVLE
RMCKRCGYEVVEASMPKEHMALIAHIKREETRLEKKKKSSVAGSEHGAKSTRTARRSEWR
DGDIFSDDEGDDSDDGRSRRSGRGGRDGGSFAPASRRGGGEGPRSAAAAAAKRATGGARL
PASGDAPLDLLDDSAMRRSMLPQGERRRVKFEDDDDDSGYRTGADGKLMIEDNASEGGRS
RYTSKTGKSRGAATARTNATGKSSRTVGTHNSNGVKRQRTTHERHSADLYKAKGKTTGDV
YSKQTKLEPYAYWPLDPKLLNRRNSKKVAARAQLGGVVKSAKAAGILRGKKSKREV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgaacgcgacgtcggtgttcgcggcggcgttcggggcgctggagcgggcgagc
gcgcgggcggggacggacgggagcgaggacgcgctggaggcgctcgaggcggtgtgcgcg
tgcgcggccgaggcggcggcggacgtcgatggacgcgtgatacgggcgaagatggagcgg
acgatcgaggtggtgatgggatgcggacgagtggtgagcgagaggtcgccgaagagcatg
cgacacgtggcgagattgttggcgtcgtgcgcggcggcggcggcgacgacgaagggcgag
tcgggaggagagacgagcgagaaacacgggaagcgcgcgtttcaggcgacgttgaatctg
tcgatcgatggaaggccaaaggtgcggaaggcggcggtgcacgcgctgggagacgtcgtg
cgaagggtgcgtggggacgcggcgcgcgcggcggcgtacggggagatgacggcggcgttc
gcgagaaagattggcgaggcgcccgaacgcgcggcggcggagatgcaaaaggcgcgaggt
gcggcgggtgcgaaagatgctcgcgcgcgcgcgacggcggcggcgacggaggcgctgtac
atgctcggcgcgatgaaggttttgttgcccgaactcgccgaacccgcgtgcggggcgtgc
gcggatgcgtgcgcgggattattggatttggatgagcctttgctcacgcaacacgccacg
gaagcgcttctggcgctcgcaaattcgcccacgatggatgccgatgacggcagcgaaggc
gtgagcgcggacacgatcgtagggctgatggcgcccatcgccgccgtggcgaatgcgaac
ttgaacacggcgccgacgatggtgatttctttggcgcgcttgctctctcgcgcgcagtgt
aagctccacgccatcgacgcgcaagcctctgcaaaagcgttgccgacgacgtttcattcc
ctcgtgaagctcttcgcgtcgcctcatgagggcgttgcgaccgaggtcgccgaagcgttg
atttcgctcgtgcgctcatgcatcgattccggtatggtgcaagaagggatcaaggctatt
gcatctgcgcgagcggcggggaagtccgcgccgtccaaaccgacgacgttgatgtccgtg
gcgtcgagcattgagtccgcgatcgggttccgctatcgcggcgcgtgggctgtttccatt
cccgtcgccacatgcgcgttcatgcgccttggtcccgcgtccgggccaatcttggctggt
actttgaacgcgctcggcgagatgggcgagcacgcgagcgagttgatgtgcaaacaacag
ctgcaagactgcatcacggcggcgattcaagccataggtcctgagcaggtgctcgcgtcg
cttccgttaaaactcgaagaagccatcgacgccgagctcgctaaccgtcaaggcgacgga
gacggcatggaagtggacgagcaagacgtcatgaatgcagcgagtcaagagactggacga
ctttggctcgtgccgttgttgcgctctggtttggttggagcgaatatgggattttttgct
gacgccattttgccgcaagcgcgcgcgttgggcgctcgcgccgagcacgcgcgaaactct
caaagttcgtacgaagcgcagcgctgcggtgccgccgagcacgcactttggagcctgttt
ccagcgtttgctaattggccgagcgacgcctcggacgcgtttccgttgattgccaaggat
ttaggcaatgcgttgagttcgagaatcgatttgcaagggcccatttgcgtaggcttgaag
cgcttgattcgtcaaggaagaatcggcgctggtgtgtacgaagtcgacgatgacgacgaa
gccggtgacggtgcgtccacaatcgccgcgggtgagcccaacgatgatcaaatgcccgcg
actttcacggttgatatcgccgaagcgcagctcgcggcggtgagcaagtacgctcggaac
tttttgcccattctttttaatctcttcgtttcgtcaccgacgtcacgacgtggtgagctg
tcgcatacaatcggtgcatttgcaaaagtgaccgatcaagcgcagttgggcggcttcttc
aggactgtactgcgcaaactcgtcaaagtgaccgcggacgatccgggcgcgccggacgct
ttggtggagggcggagacgacaagaccgcacgaaggtgcaccttcatggatctcgtcttc
gcgctcgtttccggcttggacgatcagggcttggaaatgcgcgcatacaagttgctcaac
gagctgtgcgaggcacaagacgggaagtggcttgaaccgcgcgcggcggaaatcgaagag
ctcctcgtttctggcgttgattgttgcttaccatcggcgcgacggtatcgattgaaagtt
atcggtaagattttaccagcgcttcaagaacgcgacgctgcggcggacgctgaggaaggc
ggcgacggtgccgggagcatcgccgaaactggatcgctcactgtgcttctctccgaactc
attctcgccacaaaagaaaccaacgcgcgcacgcgcacgctggcgtatcagctcttgata
agcattccacgatcaatcgagcgcaagaatgcagaagcggcacgcggagttgcgcgctct
ggtaacgcaggcgtcgccgcctggctcggcgcggctacagaggaggaggacgacgaggcg
atggagactgagcaaatgggtgtgggcgttcgacgatttttcctcaccgtgctcgctggc
atcgtcggctcgtcacctcagatgcaatcggccaccatcatggctctcgctcgtttgctc
tacgaattttcctctgcgctcgtgtccaccgttcctgaactcttaccggcagtgtgcgcg
ttgctcgaaggaaaatctcgcgaagtggtcaagtcgtgcctcggcttcgtgaaggttgtc
gtcgtgcgtctacctcaacaagatctcgccgccgaacttccgcgacttgtcccagcgctg
ttgcattggtcggaagattcgaagaatcgcttcaagctcaaggtgcgtgtcgtgttggaa
cgcatgtgcaaacgttgtggttacgaagtcgtcgaagcgagcatgccaaaagaacacatg
gcacttatcgcgcacatcaagcgcgaggagacacgattagaaaagaagaagaaatcgtcc
gttgcaggtagtgaacacggcgccaagtccacgcgaacggcgagacgttcagaatggcgc
gacggcgacattttcagcgacgacgagggcgacgacagcgacgacggccgatcgcgcaga
agtggacgcggaggtcgtgatggaggatcttttgccccagcctctagacgaggtggtggc
gagggtcctcgttccgccgcagccgcggctgcgaagcgcgcgacgggcggtgcacgactt
cctgcttccggcgacgccccgcttgatttgttggacgatagcgccatgcgccgatcgatg
ctaccgcaaggagaacgtcgtcgtgtgaagttcgaagacgatgacgatgacagtggctac
cgtacgggcgctgatggcaagctcatgattgaagacaacgcgtctgaaggcggtcgctca
cgttacacgtccaaaactggtaaatcgcgaggcgccgccaccgcgcggacgaatgctacc
ggcaagtcttcgcgtacggttggtacgcacaattccaacggtgtcaaacggcagcgcacg
acgcacgagcgccacagcgctgatttgtacaaggcgaagggtaagacgactggtgacgtc
tactcgaagcaaaccaagctcgagccgtacgcgtattggccgcttgatccaaaacttttg
aatcgacgcaatagcaaaaaagttgccgctcgcgcgcagcttggtggcgtcgtgaaatca
gcaaaggcggcgggaatcttacgcggcaagaagtcgaagcgcgaagtttag
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integrated database retrieval system
