Ostreococcus lucimarinus: OSTLU_27712
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Entry
OSTLU_27712 CDS
T01029
Name
(RefSeq) predicted protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
OSTLU_27712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_27712
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
OSTLU_27712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
PHD
C1_1
zf-RING-like
DZR
Rx_N
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
5005664
NCBI-ProteinID:
XP_001421690
JGI:
27712
UniProt:
A4S834
LinkDB
All DBs
Position
15:complement(50125..51237)
Genome browser
AA seq
370 aa
AA seq
DB search
MRAPPTRDAPTRRAPARALYACYLVVSLDPSKKGKSYVGFTTNPPRRLAQHNGAIANGAK
YTMRLRPCDMVLVVSGFSDKVQALQFEWAWQRPASCRATRTLARERGVSDKTSAPGKKAM
VMCGMLNTAPWKHMPLTVHCMSEVGERLIEKYADAIPAHVERRRTTTREMDAIVAASANA
EEEEMDEEMDDAMRARVMDVGVSGTPSASASASRPGGEALKCGVDACGKAIRSDRAVGCA
TCGARFHPVCLARHFFDRAGDEALSWSSRLIPDHGPCARCGKRLTWGAAIGAGAAREPAT
ETTTPRVHASRDCERDGEVVTSTEKIRRLRSAERREVERARVQSWARDVSDVSDDSDDDM
HDSDSDVIVE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcccccgacgcgcgacgcgccgacgcgccgcgcgcccgcgcgcgcgctctac
gcgtgttacctcgtcgtgagcctcgatccgagcaagaagggaaagtcgtacgtcggattc
acgacgaacccgccgcgacgactcgcgcagcacaacggcgcgatcgcgaacggggccaag
tacacgatgcgactgcgaccgtgcgacatggtgctcgtcgtctcgggattcagcgacaag
gtgcaggcgctgcagtttgagtgggcgtggcagcgaccggcgagctgtcgagcgacgcga
acgttggcgagggagcgcggagtgagcgataaaacgagcgcgccggggaagaaggcgatg
gtgatgtgtgggatgttgaacacggcgccgtggaaacacatgccgctgacggtgcactgc
atgagcgaggtcggggagaggctgattgaaaagtacgcggacgcgattccggcgcacgtg
gagcggagacgaacgacgacgcgggagatggatgcgatcgtcgcggcgagcgcgaacgcg
gaggaggaggagatggatgaggagatggatgatgcgatgcgagcgcgggtgatggacgtc
ggtgtgagtgggacgccgagcgcgtcggcgtcggcgtctcggccgggcggggaagcgctg
aagtgcggcgtggacgcgtgcgggaaggcgattcgaagcgatcgcgccgtcgggtgcgcg
acgtgcggcgcgcgttttcatccggtgtgcttggcgcgtcattttttcgatcgcgccggg
gacgaggcgttgtcgtggtcgagtcgattgatcccggaccacgggccgtgcgcgcggtgc
ggaaaacgtctcacctggggcgcggcgatcggcgccggcgcggcgagagaacccgcgacg
gaaacgacgacgcctcgagtccacgcctcgcgtgattgcgagcgagacggcgaagtcgtg
acgtcgactgaaaagatccgacgcttgcggtcggcggagagaagagaagtcgaacgcgcg
agagtgcaatcgtgggccagggacgtgagcgacgtgagcgatgatagcgacgacgatatg
cacgacagcgacagcgacgtgatcgtagagtag
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