Ostreococcus lucimarinus: OSTLU_27771
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Entry
OSTLU_27771 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_27771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_27771
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OSTLU_27771
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OSTLU_27771
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5005863
NCBI-ProteinID:
XP_001421726
JGI:
27771
UniProt:
A4S896
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Position
15:complement(153158..154249)
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AA seq
363 aa
AA seq
DB search
MEYRENNDVDDAVTAKIEDAMRECAADIGWFESVLAADATKDGDGDDEAGAEASEADVER
LETPGKDGAMRAAVDEASTSGTSTPSTPAEAQAKKPKRSEDGGDEGAAVNRLQAKFEATS
PKKSSASTSRAKVTTGMHPDACIFDLPGNGLLSLDELSRGGHAYGEISPESGGAMALEHA
DIPSGVSIRGVVINDRHVSHRLLEIACAKLPREGLSADANWRLSSEKNAKKSASAPQKSK
IATPSSYPRSPRDIPPGCQLDNPALFKRLDSDALFFTFYYGRDRLKLLAANELHASSWRF
HKILGTWFARLDRPKIINEKEEFETGSVIYFDNNIVVNPSDSSSSGWCQRSKSDFTSRYA
DFL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggaatacagagaaaacaatgacgtcgacgacgcggtgacggcgaagatcgaggacgcg
atgcgggagtgcgcggcggatatcgggtggtttgagagcgttttggcggcggacgcgacg
aaggacggcgacggcgacgatgaggcgggagccgaggcgagcgaggcggacgtcgagcgt
ttggaaacgccggggaaagacggcgcgatgcgagcggcggtagatgaagcgtcgacgtcg
gggacgtcgacgccttcgaccccggcggaggcgcaggcgaagaagccgaaacgctcggag
gacggcggcgacgaaggcgcggcggtaaatcgtttgcaggcgaaattcgaggcgacgtcg
ccgaaaaagtcgtctgcgtcgacttcgcgcgcgaaggttacgaccgggatgcatccggac
gcgtgtattttcgatttacccgggaatggattgttgagcctggatgaactgtcgcgcggc
ggacacgcgtacggtgagatttcgcccgagagcggcggtgccatggctctcgaacacgcc
gatattccatcgggcgtgtcgattcgcggcgtcgttataaatgaccgacatgtcagccat
cgcttgctcgaaatcgcgtgcgccaagcttccgcgcgaaggactcagcgcggatgcgaat
tggcggttatcgagcgagaagaacgcaaagaaatccgcgtcggcgccgcaaaagagtaaa
atcgcgacgccatcgtcgtatccgcgatcacctcgagacataccgcccggatgccagttg
gacaacccggcgctcttcaaacgtctcgatagcgacgccttgtttttcacgttctattac
ggcagagacagactcaaattgctcgcagcgaacgagctccacgcctcctcgtggcgtttt
cacaagattctcggcacgtggttcgcgagactcgaccgtccgaaaatcatcaacgaaaaa
gaagagttcgaaacaggatccgtcatctacttcgacaacaacatcgtggtcaatccgagc
gacagcagttcgagcgggtggtgccaacgcagcaagagcgacttcacctcgcgatacgcc
gatttcctctag
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