Ostreococcus lucimarinus: OSTLU_28133
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Entry
OSTLU_28133 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu04120
Ubiquitin mediated proteolysis
olu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OSTLU_28133
04120 Ubiquitin mediated proteolysis
OSTLU_28133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_28133
Enzymes [BR:
olu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
OSTLU_28133
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
U-box type E3
OSTLU_28133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
HD_assoc
DUF7792
Motif
Other DBs
NCBI-GeneID:
5006067
NCBI-ProteinID:
XP_001422027
JGI:
28133
UniProt:
A4S9A2
LinkDB
All DBs
Position
16:complement(281912..284734)
Genome browser
AA seq
940 aa
AA seq
DB search
MTGETLERVFFARLARDDGGGGGANAGFDERAEPYAWTVETYRRATEEHRRLGTKSDGAS
TAAREELQSCMEFCASYGGLLLNPALAGTFPQSEWAAGRGACQLLDAMRTVGGIPHGYLE
RLATRCEDEGLDEIAERVFDELRVSTRGMSPLGEFDEHLKVMYQLCSVKAFATALVKHKR
WVPMKSHLSAINGRQFETESVLGWFFRPSVLPDILGCGEPDCVGPYFSNVTKRLKRDVEA
SYGMLRGCGNRLVEGLYQILFVMLKHGGDVRQGVLNYLDAFMRVNAGRGKMRIHPQVVAS
HGGAHNLSMVALRLAMPFLDPQSGKYDKISPAYVRSRACRINLTDETRVACTADEAVAAK
LSTSEDKEDWGFICECFYITGRALHLGYVKCIAEYAACTREIQDMREAVRDLRGMLDQQL
MSSPERERYERKHEEMTAEIERALERNLQFDCALRDPRLISEAMQYYRLVAVWLMRIVAT
NGDYEAGNGFTFAQITMDKFPQTCPVAFGCLPEYVIEDLVEFILYISRYAPDALDHEPLD
EIMNFFITFMGNTAFVKNPYLRCKFVEVLRHWIPFEDGYQSQKLMTLFEVNPVSLKNLIP
SLLYLYVDIEFSGGANQFYEKFNVRYQIGELCEYLWSVQSHRNAWIKLASEDPEFYTRFL
NMLINDAIYLLDEAMKKLPEVRQTETDMQDQAAWEARPQQEREERESEFRQTRRHLRSNL
TLAMVHVRMMAYTSCDIAHPFLRPEMVERVAAMLNYFLLFLAGPERRKLKIKNPEKYGWE
PKELLGMITDIYVQIYAADKDKAFIAAIAADGRSYRDEVMLEAAAIARGLQLRSERRVAA
FEKLAADARTRASEDEEEETDLGDIPDEFLDPIYCTLMRDPVKLPSGHSCDRSIITRHLL
SDETDPFSRQPLTADQLVPDDDLREKIAAFIADRKSASGR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgacgggggagacgctggagcgggtcttcttcgcgcggttggcgcgcgacgacggcggc
ggcggcggcgcgaacgcggggttcgacgagcgcgcggaaccgtacgcgtggacggtggag
acgtaccggcgggcgacggaggaacatcgaaggttggggacgaagagcgatggggcgtcg
acggcggcgcgggaggagctgcagagttgcatggaattttgcgcgtcgtacggagggttg
ttgttgaatccggcgctcgcggggacgtttccgcagagcgagtgggcggccgggcgaggg
gcgtgtcagttgttggacgcgatgcggacggtgggtgggataccgcacggatatttggag
cgattggcgacgcggtgcgaggacgaaggtttggacgaaatcgccgagcgcgtgttcgac
gagttgcgcgtgtcgacgcgagggatgagtccgttgggggagtttgacgagcacttaaag
gtgatgtatcagctgtgctcagtgaaagcgttcgcgacggcgctcgtgaagcacaagcgg
tgggtgccgatgaagagtcatctgagcgcgattaacgggaggcagtttgagacggagagc
gtgctcggttggttcttcagaccgagcgtgttgccggacattctcggatgcggcgagccc
gactgcgtgggcccgtactttagtaacgtcacgaagcgattgaagcgagacgtggaggcg
tcgtacggcatgttacgaggctgcggcaatcgcctggtcgagggactgtatcagattctc
tttgtcatgttgaaacacggtggcgacgttcgccagggcgtgctgaactacctagatgcg
ttcatgcgcgtcaacgccgggcgtggcaagatgcgcatccatcctcaagtcgtcgcgtcg
cacggtggtgcgcacaatttgagcatggtggcgttgcgtctggcgatgccgtttttggat
ccgcagagcggcaagtacgacaaaatcagcccggcgtacgtacgaagtcgcgcgtgcagg
atcaatttgacggacgagacgcgcgtcgcgtgcaccgcggacgaagctgtagcggctaaa
ttgtcgacgtcggaagacaaagaagattggggattcatttgcgagtgcttttacatcacc
ggacgagcgttgcatttgggctacgtcaagtgcatcgccgaatacgcggcgtgcacgcgc
gagatccaagacatgcgagaggcggtgcgggatttacgaggaatgttagaccagcaattg
atgagctcgcccgagcgagagcggtacgagcgcaaacacgaagagatgactgcggagatt
gagcgcgcactcgaaagaaatttgcaattcgactgcgcgcttcgcgatccgcggctgatc
agcgaggcgatgcagtactatcgtctcgtcgctgtttggctcatgcgtatcgtcgccacg
aatggggactacgaggccgggaacggattcacctttgctcaaatcaccatggacaagttc
cctcagacgtgtccggtggcgttcgggtgcttgcccgagtacgtcatcgaggacttggtg
gagttcattctgtacatctctcgctacgcccccgacgcgctcgatcacgagccgttggat
gagattatgaacttcttcatcacattcatgggcaacacggcattcgtgaagaatccgtac
ttgcgatgcaaattcgtcgaagtcttgcgccactggatcccgtttgaggatggctaccaa
tcgcaaaagctcatgaccttattcgaggtgaacccggtgagtttgaagaacttgattccg
agtctgctgtatctctacgtcgacatcgagttctcgggaggcgcgaaccagttctacgaa
aagttcaacgttcgatatcaaatcggtgagctttgcgaatacttgtggtccgtgcaatcg
caccgaaacgcatggatcaagctcgcgagcgaagaccctgaattttacactcgattcctg
aacatgctcatcaatgatgcaatttacttactagacgaggcgatgaaaaagcttccggag
gtgcgccagacggagacggacatgcaagaccaggcggcgtgggaggcgcgtccgcagcaa
gagcgcgaggaacgcgagagcgagtttcgccagacacggcgtcatttgcgatctaacctc
acgctcgccatggtgcacgtacgcatgatggcgtacacttcgtgtgacatcgcacatcca
ttcttacgccccgagatggtcgaacgtgtcgctgcgatgctgaattacttcttgctcttc
ctcgccggtcccgagcgccgaaagctgaagattaaaaatcccgaaaagtacggctgggaa
cctaaagagcttctcggcatgatcaccgacatttacgtccagatctacgccgcggacaag
gacaaagcgttcatcgccgccatcgccgccgacggccggtcctatcgcgacgaagtcatg
ctcgaagccgccgccatcgcgcgcggtttgcagctccgctccgagcggcgcgtcgccgcg
ttcgagaaactcgccgccgacgcccgcacgcgcgcctccgaggacgaagaagaggagacc
gatctcggcgacattcccgacgagttcctcgacccgatctactgcaccctcatgcgcgat
ccggtcaaacttcccagcgggcactcgtgcgacaggagcatcatcactcgacacttgctc
agcgacgaaaccgaccctttctcgcgccaacccctcaccgcggaccagctcgtcccggac
gacgacttacgcgagaagatcgccgccttcatcgccgatcgcaaatccgcgtccgggcgt
tag
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integrated database retrieval system