Ostreococcus lucimarinus: OSTLU_28172
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Entry
OSTLU_28172 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03258
translation initiation factor 4B
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_28172
03012 Translation factors [BR:
olu03012
]
OSTLU_28172
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
OSTLU_28172
mRNA cycle factors
Stress granule specific factors
OSTLU_28172
Translation factors [BR:
olu03012
]
Eukaryotic type
Initiation factors
eIF-4
OSTLU_28172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-4B
Motif
Other DBs
NCBI-GeneID:
5006088
NCBI-ProteinID:
XP_001422048
JGI:
28172
UniProt:
A4S9E3
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Position
16:complement(join(366282..367952,368338..368373))
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AA seq
568 aa
AA seq
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MAWGTTSAWSAQTKEGNDGVESLAVPAQAFPSLGGEAAEADASGAFPSLGAAAKVKEPKK
KTKGVKLSLAEFAGASGGSSYAPPGRVGGSAFGRGRGDDVVLPSGPSSRPDDDGGVGLGG
GFNQGGDRYGGGDRYGGGDRYGGGDRSDERRPGRYDRDDRRDGEYGDREVREEQGPSRAD
TSSNWGADRRAPPQDDRYGGDRRATGFGDRYAERGGDRYGGGDDRYGDREERRPGFGDFA
DRPPREDLGPSRADESDSWSRDRKQLPERDSRYDDRPPREERDRDWGSLRSRTAAAEPPS
DDGYAPRGDRPKLQLKPRSEAAPTSASAGSSSLFGGAKPVDVKYVEDKPREAIPIRSEEN
PERTERKQYDEPKDSDGDRWGRKSSFAPRKEEELREATPEERAARPKLNLQKRSTDAPVG
AAAKSSLFGGARPREEALKEAGRDWQAEDLKRSVGAVKRKEFKEEKELKEKIQAAKDAGD
DVKDLELELTKLSLELDDKFRFAKGRPEPKDGKDGKSKDTPAPKDKPAAAEKSAPAPRER
AAPAPKLAEPAPVVARNAFDALADSMNS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttggggcacgaccagcgcgtggagcgcacagacgaaggaaggaaacgatggagtg
gaatcgttagcggtgccggcgcaggcgttcccgtcgctcggcggggaggcggcggaagcg
gacgcgagcggagcgtttccgtcgctcggggcggcggccaaggtgaaggaaccgaagaag
aagacgaaaggggtgaaactttcgctcgcagaattcgcgggtgcgtcgggtgggtcgtcg
tacgcgcctccgggacgagtcggtggatcggcgttcggtcgaggacgcggcgacgacgtc
gtgctgccgagtgggccgagctcgcgaccggacgacgacggaggcgtcggtctcggtggt
ggattcaaccaaggcggtgatcgttacggcggtggtgatcgttacggcggtggtgatcgt
tacggcggcggtgatcgcagtgatgagcgtcgtccgggtcggtacgatcgagacgaccgc
cgcgacggtgaatatggcgacagagaggttcgcgaagagcaaggtccttctcgcgcggat
acgagctctaactggggcgcggaccgtcgcgcgccgccgcaagatgatcgttacggcggc
gacaggcgtgcaacaggatttggcgaccgttacgccgagagaggtggcgaccgttacggc
ggcggcgacgatcgctacggcgaccgcgaggagcgcagaccgggatttggcgatttcgca
gaccggccgccgcgtgaggatctcggaccgtcgcgcgcggatgaaagcgacagctggagt
agagacagaaaacagttaccggagcgtgattcgcgatacgacgatcgacctccgcgcgaa
gaacgcgaccgcgactggggctctttgcgttctcgcaccgccgccgccgagccgccgtcg
gatgatggttacgctccgcgaggcgatcgcccgaagcttcagctcaaaccacgctcggaa
gccgctcctacgagcgcgagcgcgggctcaagctcgctcttcggtggcgctaagcccgta
gacgtcaagtacgtcgaggacaagccgcgcgaagcgattccgattcgctcggaagaaaac
cccgaacgtaccgagcgcaagcaatacgacgaaccgaaagattccgatggcgacagatgg
ggccgcaagtcttcgttcgccccgcgcaaagaggaagaactccgcgaagcgactcccgag
gagcgcgccgcgaggcccaaactgaacttgcaaaagcgttccaccgacgcccccgtcggc
gccgcggcgaagagctcgctcttcggcggcgctcgcccgcgcgaagaggcgctcaaggaa
gccggtcgcgattggcaagccgaagatctcaagcgctccgtcggcgcggtcaagcgcaag
gagttcaaagaggagaaggaactcaaggagaagattcaagccgccaaggacgccggcgac
gacgtcaaagacctcgaactcgagctcaccaagctctccctcgagctcgacgacaaattt
cgcttcgccaaaggcagaccagagcccaaggacggcaaggacggcaagtccaaggacaca
cccgcgcccaaggacaagcccgccgccgccgagaaatcggcgcccgcgcctcgcgagcgc
gccgcgcccgcgcccaagctcgccgaacccgcccccgtcgtcgctcgcaacgccttcgac
gccctcgcggatagcatgaattcgtaa
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