Ostreococcus lucimarinus: OSTLU_28688
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Entry
OSTLU_28688 CDS
T01029
Name
(RefSeq) predicted protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OSTLU_28688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_28688
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OSTLU_28688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
4999580
NCBI-ProteinID:
XP_001415744
JGI:
28688
UniProt:
A4RQJ8
LinkDB
All DBs
Position
1:complement(join(143532..146144,146405..146602))
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AA seq
936 aa
AA seq
DB search
MSNEPDARAATATGALALDDAASAKFVRFYRGLPSETARVVRFFDRKDCISAHGDDAMYI
ARAFYKTTSVIKTMGSGDDALPGVALNRSMFESALRELLLDGDGARVEFYEESKPSGTWT
CVKSASPGKLQAFEDELFRSNEMSDASVVCAVRVANGNVGVAYANTTTRELGACAFVDDE
QYCTLESVLCQIGVKECVVPKEGTETPEGRRLRDVVSRCGALATERQARDFDAQDLENDL
GRLVRGNVEAHRAVIDQSHAAACLAAVLRFSEMLADSANHGRCTLSMYDTGRYMRLDASA
LRALNVLPERSDGPSSFSLYGLLNKCRTPMGRRLLSRWLKQPLVDVNEIATRHDVVNEFV
TNAEVRDALRGAHLRALPDIERITRKLERRKASLMDLCRLYQASAALPHMAEALERCEGR
HGDYIRKKYAEELKKLSAPSHLGRFEALLEAAVDLSKIPDEYVICASYDAELGELQKQKD
TLEKQIRDAFADASDDLGMERDKQLKLEHNNMHGWFMRLTKKDETSVRKKLSVSYQILEA
KKDGTKFTNKKIRGLSEQRVSLDRSYDAKQRHLVDRVVDVAATFSEIFLSVSAMTAEIDV
LASFAEVAVSAPVPFVRPIMHEKTSDTIHLENSRHPNVEAQDNVRFIANTCSMKKGESWF
QIITGPNMGGKSTFIRQVGVCVLLAQVGSFVPCDDAVIAVRDAIFARVGAGDCQLRGIST
FMAEMLETAAILKAATSSSLVIIDELGRGTSTYDGFGLAWAISEHIVNEIQAPCLFATHF
HELTALEGPSGVSNFHVEALIDQESRKLTMLYQIKPGACDQSFGIHCAEFARFPEEVLKI
ARAKADELEDFSKSGAERAVADISDPKRQRTDEPGVSDDMARGVVRARQFLSDFAAVPLD
RMTPAEAVARARQLKSELETDAKHSPWLLDVLSNAA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaacccgacgcgcgcgccgcgacggcgacgggcgcgctcgcgctcgacgac
gccgcgagcgccaagttcgtgcggttttaccgcgggcttccgagcgagacggcgcgcgtg
gtgcggtttttcgatcgtaaagattgcatcagcgcgcacggcgatgacgcgatgtacatc
gcgcgggcgttctataagacgacgagcgtgatcaagacgatgggatcgggcgacgacgcg
ttgccgggcgtcgcgctcaaccgatcgatgttcgagagcgcgcttcgcgaacttttactc
gatggtgacggcgcgcgcgtggagttttacgaagagagtaaaccgagcgggacgtggacg
tgcgtgaagtcggcgtcgccggggaaattgcaagcgttcgaggatgagctgtttcggtcg
aacgagatgtcggacgcgtctgtggtgtgcgcggtgcgcgtggcgaacgggaacgtgggc
gtggcgtacgccaacacgacgactcgggagctcggggcgtgcgcgttcgtggatgatgag
cagtattgcacgctggaaagcgtgttatgtcagattggagtcaaagagtgcgtcgtgccc
aaggaagggaccgagacgccggaggggcgtcgattgcgagacgtcgtctcgcgatgcggt
gcgctcgccacggagcgtcaggcccgcgatttcgacgcgcaagacttggagaatgatttg
gggcgactcgtgcgaggaaacgttgaggcgcatcgggcggtgattgatcaatcgcacgcc
gcagcgtgtctcgcggcggttttgcgattcagcgaaatgttggcggatagcgccaaccac
ggtcgatgcacgctgagtatgtacgacaccggtcggtacatgcgactcgatgcttcggca
ctgcgcgctctgaatgttctccctgagcgctctgacggcccgagcagcttcagtttgtac
ggtttattgaacaagtgccgaacgccgatggggcgccgtttgctctcgcgatggctgaag
cagccgctcgtggacgttaacgaaatcgccacgcgacacgatgtcgtgaacgaattcgtc
accaatgcagaggttcgtgacgccctgcgcggtgcgcacttgcgagcgttgccggacatc
gaacggatcactcgtaagctcgaacgccgcaaggcgtcgctcatggatttgtgccgattg
taccaagcgagcgcggcgcttccacacatggccgaggcgctcgaacggtgcgagggacgt
catggcgattacattcgcaagaagtatgcggaagaactcaaaaagctgagcgccccgagt
catctcggccggttcgaggcgctcttagaagcggcagtggatctgagcaagattcccgac
gagtacgtcatttgcgcttcgtacgacgccgagctgggcgagttgcaaaaacagaaggat
acactggagaagcaaatccgtgatgcgtttgcggatgcgagcgatgatttgggcatggaa
cgcgataagcaattaaagttagaacacaacaacatgcatggttggttcatgcgattgacg
aagaaagacgaaacgagcgtgcgaaaaaagctcagcgtgagttatcagattctggaagcg
aagaaggatggcacgaagtttacgaacaagaagattcgtggtctttcggagcagcgtgta
tctctcgacagaagctacgacgcgaagcagcgacacttggtcgatcgcgtcgtcgacgtc
gcggcgacgttttccgaaatctttctgagcgtttcggcgatgacggcggaaatcgacgtc
ctcgcgtctttcgctgaggtcgccgtcagcgcgccggtgccgttcgtgcgcccgattatg
cacgagaagacgtctgatacgatccacctggagaactcgcgccatccaaacgtcgaagcg
caggacaacgtgcgattcatcgccaacacgtgctcgatgaagaagggcgagtcttggttt
caaattatcactggcccaaacatgggcggtaagagtacatttattcgccaagttggcgtg
tgcgtgctcttagcgcaggttggaagcttcgtgccgtgcgacgacgccgtgattgctgta
cgagatgccatcttcgcgcgcgtcggcgccggcgactgtcaactccgcggcatttccacc
ttcatggcggagatgttagaaaccgccgccatcttgaaggccgcgacttcatcgagtctc
gttatcatcgatgaactcggccgcggaacgagtacatacgacggattcggtctcgcgtgg
gcgataagcgagcacatcgtcaatgagattcaagcgccgtgtctgtttgccactcacttt
cacgagctcaccgcgctcgaaggcccgagtggcgtctccaactttcacgtcgaggcgctc
atcgaccaggagagccgaaagctcaccatgttgtaccaaatcaagccgggggcgtgcgat
cagtcgttcgggattcactgcgccgagttcgcgcggttccccgaagaagtgctcaaaatc
gctcgcgcaaaggcggacgagctcgaagacttttccaaatccggcgccgagcgcgccgtc
gccgacatctccgaccccaagcgccaacgaaccgatgaacccggtgtatccgacgacatg
gcccgcggcgtcgtccgcgctcgccaattcctctccgacttcgccgccgtccctctcgac
cgcatgacgcccgccgaagccgtcgcgcgcgctcgacaactcaaatccgagctcgagacc
gacgccaagcactccccttggctcctcgacgtcctctccaacgccgcgtga
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