Ostreococcus lucimarinus: OSTLU_28983
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Entry
OSTLU_28983 CDS
T01029
Name
(RefSeq) predicted protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_28983
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
OSTLU_28983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
4999556
NCBI-ProteinID:
XP_001415553
JGI:
28983
UniProt:
A4RRE0
LinkDB
All DBs
Position
1:630203..634873
Genome browser
AA seq
1556 aa
AA seq
DB search
MFGGDGADGANPFGAPRARAFGTSARDASASPFGASDPFGRGDASATTATTAPGGAPGAG
GGTATPFGGFGGGAPAANAPGGVGGASGGFGGFGASASASPFGSGTGAAAHGASGGGGSA
FGGGANAFGGGGAFGASAPAASASPFGAPASPFGTGAPAASASPFGASASPFGASASPFG
ASASPFGASASPFGASAPQTAPSTPFAPVASSPFGGGPSSTTALVFGAFGAASPSSTPSP
FAVKVPEPSAAASPFGGGGFSFSASPTTAPASPFGASPFGAAPAVSSAPTGGIFGVAPTT
GGLSATASPFAPKPATSGFAFGGANPPEAEKRDAIASIPAFGGGAKAFVPPKPKPIADRL
NLASEAPSTSNAAGDETGEITTSSGHIVGTCDLMCPAKEREFRSANGDLEVFERVDPEDR
MKSHPDLCIKKYTRIVDEITPDMVRTKKGLQLAIDQLWRILDAEDKDFMTKSKFLWDRLR
SIRQDLNLQQITDSFAVKLLEQMVRYTILAEHELCEATASATNPDGHNSHLNVEQLTKTL
TSLRHMYDDHADRGQQLGIDAEAEMFCYQLLLRIDSHGRYAVQRSEMLNDLRSVRAEVLK
HRDVQFALQCHRAYHENNVARFFHLVKKATYVQACCLHKFFNSMRGKALEVMNTTYGKFI
MPITEIARLLHTDDMETEALCIHHGLNVTRGKAGDKPPAVTMRESSYISPAEEFPISRSD
LIMNKRAASYLLEIVGKDESVRIAAKTLPTMSTPKTTPQLSEADKRKQQADELRAKIALR
ESQLEKERAAILAKKKEIEERKAAEKKAAEEAERKAKEAEEAARRAEEEAKAAEAKARAE
AEAAEAERRRLAEEAARAKAEAEAKALAEAERRKAEEEAERQRVLAEERARETAAAAHRA
AIAKAEAEARARRAAEAEAERLRLIAEENARRQAAEAKAARKRAKRHMAIRRLTFSLWRM
NSKEFKRERLIGEALAMASPAPALNLGGKALLDASAASERPTDALAQLRKKIESVRSPEF
GVPLDVPQTVGLALHEAAATAAPSALVWKCLICTGAEADSGASASSRPRTTTATIVAEWL
RTKLSRGGSAHATEPGTGTILSLYGARLPLPGTDEENDYMMGPLAWIVVRDVPAMMENSK
GSNAGASSAIFVLDCGGGTCESHELKRLRAFSSAVKRSEAPLVIFVASRDNTNQNDIKKS
ITSSGIEGALVIFLPPKGPEEWSDDKLSEVLVWTAERAPKAPRRRIAYLSAEIEEALRPG
YVNLTVKPRVSPRACIRAFNDALDQLEHKILEAAQTEDGAEWPPVEIGLVNAALPPPGWR
SKSRRTKVLDLLHSVRLPDFEAGEKPVRAFIDYVAAVLPHYPKDYGQCLLAQARYDPHFH
KLQDIPWVTLFQTLITLLLSGLESQSRDACIYLPPGHPSYDFTPYEPEPELLAERASSKT
PTEAFDDATNRKRKHEALATAIPEASRFEEIDSAPLDNVRAVLDDLRRDVDAHARFADAS
ERWLAALATNTPGTAEDPESFADAGESDAHLTAFNASVAAERAAEARLRLLLDAAP
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcggcgacggcgcggacggtgcgaatccgttcggcgcgccgcgcgcgcgcgcg
ttcgggacgagcgcgcgcgacgcgagcgcgagtccgttcggcgcgagcgacccgttcggg
cgcggcgacgcgagcgcgacgacggcgacgacggcgccgggaggggcgccgggcgcgggc
ggagggacggcgacgccgttcggggggttcggggggggcgcgccggcggcgaacgcgccg
gggggggtcggaggcgcgagcggcgggttcggcgggttcggcgcgagcgcgagcgcgagt
ccgttcgggagcgggacgggcgcggcggcgcacggagcgagcggtgggggtgggtcggcg
tttggaggcggtgcgaacgcgttcgggggtggaggggcgttcggcgcgagcgcgcccgcg
gcgagcgcgagtccgttcggcgcgcccgcgagtccgttcgggacgggcgcgcccgcggcg
agcgcgagtcctttcggcgcgagcgcgagtcctttcggcgcgagcgcgagtcctttcggc
gcgagcgcgagtcctttcggcgcgagcgcgagtcctttcggcgcgagcgcgccgcaaacg
gcgccgtcgacgccgtttgcgcccgtcgcgagctcgccgttcggcggcggcccatcgtcg
acgaccgcgctggtgttcggcgcgttcggggcggcgtcgccgagctcgacgccgtcgcct
ttcgcggtgaaggtaccagaaccatcggcggcggcgtcgccgttcggtggcggtgggttc
agctttagcgcgtctccgacgactgcgcccgcgagtcctttcggcgcgagtcctttcggc
gcggcgccagcggtatcttcggctccgaccggcgggatcttcggcgtagcgcccacgaca
ggggggttgagcgccacggcatcgccttttgcgcctaaaccggccacatctggtttcgcg
ttcggcggcgcgaatccaccagaggcggagaaacgagacgccatcgcaagtattcctgcg
tttggtggcggcgcgaaagctttcgtcccgccgaagccaaaacccattgcggatagatta
aacttagctagtgaagcgccatcgacgtcaaatgctgcgggcgatgagacgggcgaaatc
accacctcgagtggtcacatcgtgggtacgtgcgatttgatgtgcccggcgaaggagaga
gaattcaggagcgcgaacggcgacttggaagtgttcgagagagtcgacccagaggatcgc
atgaagtctcatccagatttgtgcattaaaaaatatacgcgcatcgttgatgaaattacg
cctgacatggttcgaacgaagaaaggtttacagttggcgatagatcaactttggcgaatt
ctcgacgccgaggacaaagacttcatgacaaagagcaaatttctttgggacaggctgcga
tctattcgccaggatttgaatttacagcaaatcacggattcgttcgcggtaaagctatta
gagcaaatggttcgttacaccatcctagccgaacacgagctgtgcgaggcgacagcgtcg
gcgacgaacccggacgggcacaattctcacttgaatgttgagcagctgacgaagacactc
acgtctcttcgacacatgtacgacgatcatgccgatcgtggtcagcaactcggtattgat
gccgaggccgagatgttctgttatcagctcttgcttcgcatcgactcgcacggacgctac
gccgtgcaacggtcggagatgttgaacgatttaaggagcgtccgcgctgaggtgctaaag
catcgtgacgttcaattcgcgctccagtgtcatcgtgcatatcacgaaaacaacgtcgcc
cgattctttcatcttgtgaaaaaagcgacgtacgttcaagcttgctgtctgcacaagttc
ttcaatagcatgcgtggtaaagcgctcgaggtcatgaacacgacgtacggcaagttcatc
atgccgattaccgaaatcgcgcgtcttctgcatacggatgatatggagacggaggcgttg
tgtatacatcacggattaaacgtcaccagaggtaaagccggggataaaccacctgcggtg
actatgcgcgaatcgtcgtacatttctcccgcggaagagtttccaatctcgcgctcagat
ttaatcatgaacaagcgagccgcttcttacttgcttgagatcgtcggtaaggacgaatcg
gttaggattgctgccaaaacgctcccaactatgagtacacccaaaactacgccacaattg
tccgaagcggataaacgcaagcagcaggctgatgaactccgagcaaagattgcgttgcgc
gaatcgcagctcgaaaaggaacgagccgccattctcgccaagaagaaggagatcgaagaa
cgcaaggctgcggaaaagaaggctgcggaagaagctgagcgaaaggctaaggaagcagag
gaggcggcaaggcgagcggaagaagaagcgaaggctgccgaggcgaaggcgagagctgag
gctgaagctgcggaagccgagcgaagacgtctcgcagaagaagccgctcgagccaaagcc
gaagctgaggcgaaggcgctcgctgaggctgagcgacgaaaagcagaagaggaagcggaa
cgtcaacgagtacttgccgaggaacgagctcgagagacagctgccgccgcacaccgggct
gcaatcgcaaaagccgaagccgaagctcgcgcgcgccgcgctgccgaggctgaggctgag
cgactccgtcttatcgctgaagagaacgctcgacgtcaagcggctgaggcaaaagcagcg
cgaaagcgagcgaaaaggcacatggcgatccgccgactcacattttctctttggcgtatg
aactcgaaggagttcaagcgagagcggttgatcggcgaagcgctcgccatggcaagtcct
gcgccggcgctgaatctcggcggcaaggctctcctcgacgcgagtgcggcatctgagcgt
ccgacggacgcgcttgcgcaacttcgaaagaagattgaatctgtccgctcgccagaattc
ggcgtgcctttggatgttccgcaaaccgttggattggcgctgcacgaagctgcggccacc
gcggcgccgagcgctcttgtttggaagtgtctcatctgcactggcgcggaggcagactcc
ggagcgagcgcgtcatcacgaccgaggacgactacagcgacaatcgtcgcggagtggctg
cgcacgaaactttctcggggcggaagcgcacacgcgacagagcctggcactgggacgatt
ttgtcgctctacggcgcccgacttccacttccaggaactgatgaggaaaatgattacatg
atgggtcctttggcctggatcgtcgtcagagacgtgccagcaatgatggaaaattccaaa
ggttccaacgcgggcgcgtcatcggcgattttcgttctcgattgcggtggcggcacgtgt
gagagtcacgagctgaagcgtcttcgagcgttcagctcagcggtgaagaggagtgaagcg
ccgcttgtaatcttcgtcgcatcgagagacaacacgaatcagaacgatatcaagaaaagt
atcacaagttccggcatcgagggcgcgttggtgatatttcttcctccgaaaggtccggaa
gaatggtccgacgacaagttgtccgaagtgctggtttggacggcggaacgcgcgccaaag
gcgcctcgacgcaggatcgcatatctttcggcagaaattgaagaagcgttacgaccaggc
tatgtcaacttgacggtcaagccacgtgtgtctccgcgagcgtgcatacgcgcgttcaac
gatgccctcgaccagctggagcataaaatactcgaagccgcgcaaactgaggacggcgct
gaatggccgccggttgagatcggtctcgtcaacgcggcgcttccgccgcctggctggaga
tccaagtcccgtcgaacgaaagtgttagatttgttgcattccgtgcgcctgccagatttc
gaggctggagagaagcccgtgcgcgctttcatcgattacgtcgcagcggtgttaccgcac
tacccgaaagactacggccaatgcttgctcgcgcaagcgcgatacgacccgcatttccac
aagctgcaagacattccgtgggtgacgctgttccaaactctcatcacacttctgctgagc
ggattagagagccaaagccgcgacgcgtgcatctaccttcctccgggtcatccctcgtac
gacttcacgccgtacgagcccgagccggaattgctcgccgaacgcgcgtcttcgaagacg
ccgaccgaagcctttgacgacgccacgaaccgcaagcgcaagcacgaggcgctcgccacc
gccatccccgaagccagtcggttcgaagagatcgactccgcacccttggacaacgttcgc
gccgtcttggacgatttacgtcgcgacgtcgacgcgcacgcgcgcttcgccgacgcctcc
gagcgttggctcgccgcgctcgcgaccaacacccccggcaccgccgaagaccccgaatcg
ttcgccgacgccggcgaatcggacgcgcatctgaccgcgttcaacgcgtccgtcgccgcc
gagcgcgccgccgaggcgcgtctccggcttctcctcgacgccgcgccgtag
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