Ostreococcus lucimarinus: OSTLU_29168
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Entry
OSTLU_29168 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OSTLU_29168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_29168
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
OSTLU_29168
Prokaryotic type
Archaeal type
TFE
OSTLU_29168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
FaeA
HTH_9
WHD_RecQ_mid_bact
WHD_DprA
Motif
Other DBs
NCBI-GeneID:
4999454
NCBI-ProteinID:
XP_001415642
JGI:
29168
UniProt:
A4RRX3
LinkDB
All DBs
Position
1:934478..935752
Genome browser
AA seq
424 aa
AA seq
DB search
MSEHKKLMRMTARAFYATSYARERLNARAVAPKPTTSTDKANSGDVAMMDVGAAPSAVKA
PVVDKKTKIDDPRVVEVVVDALTRRTWTREDDLANDLKLSFKQVRKLLTYLEREKLVSRA
HVREKDKARAQALAERGITDAPDVKKTVSWCSLNYGRALDVTRYRLHVMKKQARQRVDKG
KIHEVYVCVGPTEFCGKIYSSLDAAALLDPVEMVFKCSNCGCEVRQAGKDGAPEPEGAAR
ETKESLQRRYDELERQFKPLEAQLAKAMKTPAPLYGTLTEWAVARKRYSQNKGGGGGGGG
GRRGGAALDVHLEETKFVVELGSTAEEQQKQAEIDAIKVQPEWVTRNQFEKEDAAQGAAA
NGEDAKDAAAKPTADNEVQEQYLQALLSALQKQQGGKKPEDKKEEVAADVAAAVDDMFDE
WEDV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacaagaaactgatgcggatgaccgcgcgagcgttctacgccacgagctac
gcgcgcgaacgcctcaacgcgcgcgcggtggcgccgaaaccgacgacgtcgaccgacaaa
gccaactctggggacgtcgcgatgatggacgtgggcgccgcgccgagcgcggtcaaggcg
ccggtggtggataaaaagacgaagatcgatgatccgcgcgtcgtggaggtggtcgtggac
gcgctgacgcgacggacgtggacgagagaggatgatttagcgaacgatctcaagttgagt
ttcaagcaagtgcgcaagttgttgacgtacctcgagcgagagaagctcgtatcgcgggcg
cacgttcgggagaaggataaggcgcgcgcgcaggcgttggcggagcgtgggataacggat
gcgccggacgtgaagaagacggtgagttggtgctcgttgaattacggacgcgcgctcgac
gtgacgaggtatcggctgcacgtgatgaagaagcaggcgagacaacgcgtggataagggc
aagatacacgaggtgtacgtgtgcgtcgggccgacggaattttgtgggaagatttactcg
agcttggacgcggcggcgctgttggatccggtggagatggttttcaagtgctcgaattgc
gggtgcgaggtgcggcaggcggggaaggacggggcgcctgaaccggagggtgcggcgaga
gagaccaaagaaagcttgcagcggcgatacgacgaactcgagcgccaatttaagcccttg
gaggcgcagcttgcgaaggcgatgaagacaccggcgccgttgtacgggacgttgacggag
tgggcggtggcgagaaagcgatactctcaaaacaagggcggcggcggcggtggcggcggt
gggcggcgaggcggtgccgcactcgatgtgcacctcgaggagactaaatttgtcgtcgaa
ctcgggtccacggcggaggaacaacagaagcaggccgagattgacgccataaaggttcaa
ccagagtgggtgacgcgcaaccaattcgagaaggaggatgccgcgcagggcgccgcggcg
aacggcgaagatgcgaaggatgcggcggcgaaaccaacggcagataatgaagtgcaagag
caatacctgcaagctttgctctcagcactacaaaaacagcagggcggaaagaagcccgaa
gacaaaaaggaagaggtggcggctgacgtcgccgctgccgtcgacgatatgttcgacgag
tgggaggacgtgtga
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