KEGG   Ostreococcus lucimarinus: OSTLU_29168
Entry
OSTLU_29168       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OSTLU_29168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_29168
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     OSTLU_29168
 Prokaryotic type
  Archaeal type
    TFE
     OSTLU_29168
SSDB
Motif
Pfam: TFIIE_alpha FaeA HTH_9 WHD_RecQ_mid_bact WHD_DprA
Other DBs
NCBI-GeneID: 4999454
NCBI-ProteinID: XP_001415642
JGI: 29168
UniProt: A4RRX3
LinkDB
Position
1:934478..935752
AA seq 424 aa
MSEHKKLMRMTARAFYATSYARERLNARAVAPKPTTSTDKANSGDVAMMDVGAAPSAVKA
PVVDKKTKIDDPRVVEVVVDALTRRTWTREDDLANDLKLSFKQVRKLLTYLEREKLVSRA
HVREKDKARAQALAERGITDAPDVKKTVSWCSLNYGRALDVTRYRLHVMKKQARQRVDKG
KIHEVYVCVGPTEFCGKIYSSLDAAALLDPVEMVFKCSNCGCEVRQAGKDGAPEPEGAAR
ETKESLQRRYDELERQFKPLEAQLAKAMKTPAPLYGTLTEWAVARKRYSQNKGGGGGGGG
GRRGGAALDVHLEETKFVVELGSTAEEQQKQAEIDAIKVQPEWVTRNQFEKEDAAQGAAA
NGEDAKDAAAKPTADNEVQEQYLQALLSALQKQQGGKKPEDKKEEVAADVAAAVDDMFDE
WEDV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgagcgaacacaagaaactgatgcggatgaccgcgcgagcgttctacgccacgagctac
gcgcgcgaacgcctcaacgcgcgcgcggtggcgccgaaaccgacgacgtcgaccgacaaa
gccaactctggggacgtcgcgatgatggacgtgggcgccgcgccgagcgcggtcaaggcg
ccggtggtggataaaaagacgaagatcgatgatccgcgcgtcgtggaggtggtcgtggac
gcgctgacgcgacggacgtggacgagagaggatgatttagcgaacgatctcaagttgagt
ttcaagcaagtgcgcaagttgttgacgtacctcgagcgagagaagctcgtatcgcgggcg
cacgttcgggagaaggataaggcgcgcgcgcaggcgttggcggagcgtgggataacggat
gcgccggacgtgaagaagacggtgagttggtgctcgttgaattacggacgcgcgctcgac
gtgacgaggtatcggctgcacgtgatgaagaagcaggcgagacaacgcgtggataagggc
aagatacacgaggtgtacgtgtgcgtcgggccgacggaattttgtgggaagatttactcg
agcttggacgcggcggcgctgttggatccggtggagatggttttcaagtgctcgaattgc
gggtgcgaggtgcggcaggcggggaaggacggggcgcctgaaccggagggtgcggcgaga
gagaccaaagaaagcttgcagcggcgatacgacgaactcgagcgccaatttaagcccttg
gaggcgcagcttgcgaaggcgatgaagacaccggcgccgttgtacgggacgttgacggag
tgggcggtggcgagaaagcgatactctcaaaacaagggcggcggcggcggtggcggcggt
gggcggcgaggcggtgccgcactcgatgtgcacctcgaggagactaaatttgtcgtcgaa
ctcgggtccacggcggaggaacaacagaagcaggccgagattgacgccataaaggttcaa
ccagagtgggtgacgcgcaaccaattcgagaaggaggatgccgcgcagggcgccgcggcg
aacggcgaagatgcgaaggatgcggcggcgaaaccaacggcagataatgaagtgcaagag
caatacctgcaagctttgctctcagcactacaaaaacagcagggcggaaagaagcccgaa
gacaaaaaggaagaggtggcggctgacgtcgccgctgccgtcgacgatatgttcgacgag
tgggaggacgtgtga

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