Ostreococcus lucimarinus: OSTLU_29370
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Entry
OSTLU_29370 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12881
THO complex subunit 4
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
olu03015
mRNA surveillance pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_29370
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_29370
03015 mRNA surveillance pathway
OSTLU_29370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_29370
03041 Spliceosome [BR:
olu03041
]
OSTLU_29370
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
OSTLU_29370
TREX complex
OSTLU_29370
Spliceosome [BR:
olu03041
]
Complex C
Other components
EJC/TREX
OSTLU_29370
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
OSTLU_29370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
5006550
NCBI-ProteinID:
XP_001422492
JGI:
29370
UniProt:
A4SAT1
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All DBs
Position
20:122557..123162
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AA seq
201 aa
AA seq
DB search
MRPETRPRLRSRRFIFARSTWLDSRTLDFLKDESIDDFAAAIALPRLSQELFGQVGRVLN
AGINYGPNGKSKGTAEVTLATLESALKAVKTYNGVKLDGRPLNIVIVDAPQQPKQKPITQ
RLSGLKQQPKNKNGKQQQKKAPVPAPKRGKATQKVVASAKKAAPKKKPARKPKEKKAAPT
AADLDASLDAYKASADVQMAA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgaaactcgacctcgactacgctcacgtagatttattttcgctcgttctacg
tggctcgactctcgcactctcgatttcctgaaggatgaaagtattgatgatttcgccgcg
gctattgcccttccccgtttatcacaggaactcttcggacaagtcggacgcgtgctcaac
gctggcatcaactacggccccaacggcaagtccaagggtaccgccgaagtcacgctggcc
acgctcgaatccgcgctcaaggcggtgaagacgtacaacggagtcaagctcgacggccgc
ccgttgaacatcgtcatcgtcgacgctccgcaacaacccaagcagaagccgatcacccaa
cgtctttctggcttgaagcagcaaccgaagaacaagaatggcaagcaacagcaaaagaag
gcccctgtgcccgctcccaagcgcggcaaggcgacgcaaaaggttgtcgcctcggccaag
aaagccgcgccgaagaaaaagccggcgcgcaagcccaaagagaagaaggcggcccccacc
gccgcggacttggacgcctcgttggacgcgtacaaggcttctgccgacgtccaaatggcc
gcttag
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