Ostreococcus lucimarinus: OSTLU_29402
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Entry
OSTLU_29402 CDS
T01029
Symbol
CLPC1
Name
(RefSeq) chaperone, Hsp100 family, ClpC-type
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
olu03110
]
OSTLU_29402 (CLPC1)
Chaperones and folding catalysts [BR:
olu03110
]
Heat shock proteins
HSP100
OSTLU_29402 (CLPC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
TniB
nSTAND3
NBD_SMAX1
AAA_18
RNA_helicase
Zeta_toxin
NACHT
AAA_25
YGL041W_C
AAA_24
DUF7260
Motif
Other DBs
NCBI-GeneID:
5006733
NCBI-ProteinID:
XP_001422509
JGI:
29402
UniProt:
A4SAW5
LinkDB
All DBs
Position
20:join(175021..175029,175169..175255,175523..177949)
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AA seq
840 aa
AA seq
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MFERFTEKAIKVVMLAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEAR
IEVEKIIGRGSGFVAVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVA
ARVLENLDADPAKIRSQVIRMVGETQEAVGAGAGGGQGAQSGSKTPTLEEFGSDLTKKAE
EGKLDPCIGRANEIVRVTQILGRRTKNNPCLIGEPGVGKSAIAEGLAQKIAANDVPDTLD
SKRMMTLDMGLLVAGTKYRGEFEERLKKLMDEVKSDENIILFIDEVHTLIGAGAAEGAID
AANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPSVDETIQILRGLR
ERYELHHKLKYDDDALIAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLENAALPEEAKE
LDKELKALMKEKDTAIRSQDFEAAGGLRDREVELRAQIKQITERKQEENKAKAESGDASG
PTVVEQDIADIVAAWTGIPVDKVSSDEGTRLMDMEETLHKRLVGQEEAVVACARAIRRAR
TGLKNPNRPVASFIFSGPTGVGKSELAKSLSAFYFGSEEAMVRLDMSEFMERHTVSKLIG
SPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVID
FKNTLIIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRL
DEIIVFRQLNKQEVREIAYIMLENVFKRLKEKEIVLECTERFKDRLVDEGFSPAYGARPL
RRAIMRLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITVLTGDGRELKAGSAIGGPAGIA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcggttcacggagaaggccatcaaggtggtgatgttggcgcaggaggaggcg
cggcgattggggcacaacttcgtcgggaccgaacagatcatgctcggtttgattggcgaa
ggcaccggcatcgcggccaaggtgctcaagtcgatgggcatttcgttgaaggaagcgcgc
atcgaggttgagaagattattggacgcggttccggtttcgtcgcggtggagattccgttc
acgccgcgcgcgaagcgcgtgttggagctcgcgctcgaggaggcgcgccagttgggccac
aactacatcggcaccgaacacttgttgctcggtttgctccgtgaaggcgagggcgtggct
gcgcgcgtgctcgaaaacctcgacgccgacccggcaaagattcgttctcaagtgattcgc
atggttggtgagacgcaagaagccgtcggcgcgggcgccggcggcggccaaggcgcgcaa
tccggctccaagacgccgactttggaagagttcggtagcgacctcaccaagaaggctgaa
gagggtaagctcgatccgtgcatcggtcgtgcgaacgaaatcgttcgcgtcacgcaaatt
ctcggtcgccgtaccaagaacaacccgtgcttgattggtgaaccgggcgtcggtaagtct
gccattgccgaaggtctcgcgcaaaagattgccgccaacgacgttccggatactctcgac
tccaagcgtatgatgacgctcgatatgggtttgctcgtcgccggtaccaagtaccgtggt
gagttcgaggagcgtctcaagaagctcatggacgaagtgaagagtgatgaaaacatcatc
cttttcatcgacgaagtccacacgctcatcggcgccggcgcggcggagggcgccatcgat
gcggcgaacatcttgaagccggccttggcgcgtggtgaactccagtgcatcggtgcgacg
actattgacgagtaccgcaagcacatcgagaaggatccggcgctcgagcgtcgtttccaa
ccggttcaagttccggagccgtcggtggatgaaaccattcaaattctccgcggactccgc
gagcgttacgaattgcaccacaagctcaagtacgatgacgacgctttgatcgccgccgca
aagttctcgagccagtacatctccgatcgtttcttgccggacaaggcgatcgatctcatc
gatgaggctggttctcgcgtgcgactggaaaacgccgccctcccggaggaagccaaggaa
ctcgataaggagctcaaggctttgatgaaggagaaggatacggccatccgctctcaggat
ttcgaagccgctggtggccttcgtgatcgcgaagtcgagctcagagctcaaatcaagcaa
atcaccgagcgaaagcaagaggagaacaaggcgaaggctgaatccggtgacgcgtctggt
ccgacggtggtcgagcaagacattgccgatattgtcgccgcctggactggtatccccgtc
gataaggtgtcttccgatgaaggtacccgattgatggacatggaagaaacccttcacaag
cgattggttggtcaagaagaagccgtcgtggcgtgcgctcgcgccattcgccgcgcccgt
accggcttgaagaacccgaaccgtccggtcgcgtccttcatcttctccggtcccactggt
gtcggtaaatccgagctcgccaagtccctctctgccttttacttcggttccgaagaagcc
atggttcgtcttgatatgtccgaattcatggagcgccacactgtttccaagctcatcggt
tccccgccgggttacgtcggttactctgagggtggtcagctcaccgaggctgttcggcgg
cgtccgtacaccctcgtgcttttcgatgaaatcgaaaaggcgcacccggatgtgttcaac
atgatgcttcaaatcctcgaagacggtcgcttgaccgactccaagggtcgcgtgattgac
ttcaagaacaccctcatcatcatgacgtcgaacgttggtgcgtcggcgattgaaaagggt
ggcggtggattgggcttccaactcgacgacaacgcggaggatcagtcctacaaccgcatt
aagagcttagtcatggaagacttgaagaactacttccgaccggaattcctcaaccgtctt
gacgaaatcatcgtgttccgtcaactcaacaagcaagaagtgcgagaaattgcgtacatc
atgctcgagaacgtcttcaagcgccttaaggagaaggaaatcgtcctcgaatgcacggag
cgattcaaggatcgtctcgtcgacgagggtttctctccggcgtacggtgcgcgtcctttg
cgtcgcgccatcatgcgcttgcttgaggacaacctctccgagaagatgctcacgggtgag
atttcggagggttcgtcgtgcattatggacgtgaacgcggaaggtgaaatcacggtgttg
actggcgacggtagagagctgaaggctggtagcgcgatcggtggtccggctggcatcgcg
taa
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