Ostreococcus lucimarinus: OSTLU_29941
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Entry
OSTLU_29941 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14290
exportin-1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
olu03013
Nucleocytoplasmic transport
olu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_29941
03008 Ribosome biogenesis in eukaryotes
OSTLU_29941
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
OSTLU_29941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_29941
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_29941
03016 Transfer RNA biogenesis [BR:
olu03016
]
OSTLU_29941
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_29941
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
OSTLU_29941
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
OSTLU_29941
Pre-60S particles
OSTLU_29941
Transfer RNA biogenesis [BR:
olu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
OSTLU_29941
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
OSTLU_29941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
5000545
NCBI-ProteinID:
XP_001416107
JGI:
29941
UniProt:
A4RTA6
LinkDB
All DBs
Position
2:join(238431..238517,238865..241957)
Genome browser
AA seq
1059 aa
AA seq
DB search
MDVARAVLDGDVAALDEVVEQFYGGDSGKRAEAEKILQSLQEHEQTWTRVDGILETSKNA
NTKFFALQVLDGVIKYRWGLLPNDQREGIKNFVSNLIIKLSADETTFRRDRAYINKINNV
LVQILKHDWPHRWQSFIPDLVGAARTSESLCENCMSILKLLSEEVFDFSRGEMTQDKIRA
LKTSLNSEFKMIHELCEFVLTHSQKPELIKTTLTTLNAFLSWIPLGYIFESSLLDTLLAL
APNPAYRNIAFLCLSEIGGLNVEAKYDAHFIKLYTVAVEHLLGILPRGVNIAQAYANGTD
DEQAFVQNLGIFLTQFFKAHIVLLESTAELQQSMLIGIEYLLNISYVEEPEVFKVCLDYW
HFMVCDVFQSEGGDAGDFRFGGDVVAQNERGVNRRVLYAAPFSKLRLLMISRMAKPEEVL
IVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHKDTETQMLEKLHAQLNGREYTW
HTLNTLCWAIGSISGSMQEDQENRFLVTAIRDLLNLCEIMRMKDHKAVIASNIMYVVGQY
PRFLRLHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKISMKCKRKFVILQVGETEPFV
DELLRGLSDTIRDLEPHQVHTFYESVGHMIGSELNPAKREEYVQRLMAPPNEQWQQIMTQ
ARQNSECLKNQDVIKNILNILKSNTHFCMSLGQPFQNQMSAIYADVLNVYKLYSELVSQS
IAEGGPYASKSSFVKLLRSVKREVLRLIETFVERCDDPHLVAQQLVPQMYDPILGDYARN
IPDARDAEVLSLFAAIINKVETAMTDEIPKIFDAVFECTLSMITKNFEDFPDHRLKFFLL
LRSVTNHCFRALVALSPAHLKLIIDSIVWAFRHTERNVADEGLNLLLEMMKYFQLSEYCN
QFHQSFYLMTMSEVFAVMTDGFHKPGFKLHALILQNLFTISESDQLSAPLWDVAAKGAGA
YPSNAAFVQEHCAQLLCTSFPNMPPAEVQTLVLAMFQCKNDLAAFKSTLRDFLVQTKQFS
SVDFAEEEQSRLAAQRQARLSAIPGMVSGANVGDMDDDE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgcgcgcgcggtgctcgacggcgacgtcgcggcgctggacgaggtggtggag
caattctacggcggtgactctggcaagcgcgcggaggcggagaagattttgcagagtttg
caagagcacgaacagacgtggacgcgcgtggatgggatcttggagacgtctaagaatgcg
aatacgaagtttttcgcgctgcaagtgctggatggggtgatcaagtaccgatgggggttg
ttgccgaacgaccaacgcgaggggatcaaaaatttcgtgagcaatttgatcatcaagttg
agcgccgatgagacgacgtttaggcgggatcgggcgtacatcaacaagatcaataacgtg
ctggtgcagattttgaaacacgattggccgcatcgctggcagagtttcattccggatttg
gtgggcgcggcgaggacgagcgagtcgctgtgcgaaaactgcatgagcatcttgaaattg
ctgtcggaggaagttttcgatttcagtcgaggggagatgacgcaagacaaaattagagcg
ctgaagacttctttgaacagcgagttcaagatgattcacgagctgtgcgagtttgtcctg
acgcattcgcaaaaaccagagttgataaagacgacgctcacgacgctcaacgcgttcttg
tcgtggatacctctcggttacatcttcgagtcgtcgttgttggacaccttgctcgcgctc
gcgcccaatccggcgtatcgcaacatcgcattcctctgtctgtcggagattggtggtttg
aacgtcgaggcgaaatacgacgcgcacttcatcaagctctacaccgtcgccgtggaacac
ctgctgggcatcttgcctcgcggcgtgaacatcgcccaggcgtacgccaacggtacggat
gacgagcaggcgtttgtgcaaaacttgggcatcttcctcactcaatttttcaaagctcac
atcgtgctcttggaatcgaccgccgagttgcagcaatcgatgctcatcggcatcgagtat
cttttgaacatttcctacgtggaagaacctgaagttttcaaggtttgcctcgattactgg
cacttcatggtgtgtgatgtgttccaatccgaaggcggtgatgccggggacttccgattc
ggcggagatgtcgtcgctcaaaacgagcgaggcgtaaaccgtcgagtgctgtacgccgcg
ccgtttagcaaactgcgcttgctgatgatttcgcgcatggccaaaccggaggaggttttg
atcgtagaggatgaaaatgggaacatcgtgcgagaaactttgaaggataacgacgtcttg
gtgcagtacaagattatgcgcgagactctgatttaccttgcgcatctcgaccacaaggat
accgaaacgcaaatgctcgaaaaactgcacgcgcagctcaacggtcgtgagtacacgtgg
catacgttgaacacgctctgttgggccatcggttcgatcagtggatccatgcaagaggat
caagagaaccgatttctggtgaccgccattcgagacttgctcaacctgtgcgaaatcatg
cgcatgaaggaccacaaagccgtcatcgcgtcaaacatcatgtacgttgtcggacagtac
ccgcgcttcttacgtctacattggaagttcttgaagaccgtggtgaacaagctgttcgag
ttcatgcacgagacgcatccgggtgtgcaggatatggcgtgcgatacgtttctgaagatc
tccatgaaatgcaagcgcaaatttgtcattttacaagttggcgagacggagccgttcgtc
gacgaacttttgcgaggactgtctgacactattcgcgacttagagccgcatcaagtgcac
acgttctacgaatctgtcggtcacatgatcggcagcgagttgaacccggcgaagagagaa
gagtacgtgcagcgattgatggcgcctcccaatgagcagtggcaacaaatcatgactcag
gcgcgccagaatagtgagtgcttgaagaatcaagacgtcatcaaaaacatcttgaacatt
ctcaagtcgaacacgcacttttgcatgtctcttggccaaccgttccaaaaccaaatgtca
gccatttacgcggatgttttgaacgtttacaagctttacagcgaattggtcagtcaaagc
atcgcggaaggcgggccgtacgcaagtaagtcgtcctttgtcaagttgttgcgctccgtc
aaacgagaagttcttcgactcatcgaaacatttgtcgaacgctgcgacgacccgcatctc
gtcgcgcagcagctcgtgccgcagatgtacgatcccatcttgggtgactatgcgcggaac
attccggacgcgcgcgacgccgaggtgttgtcgctcttcgcggcaatcatcaataaggtg
gagactgcgatgaccgatgaaattccgaagatcttcgacgccgtgtttgagtgcacgttg
tcgatgattacgaagaactttgaggacttccccgatcatcgactaaagttcttcctgctt
cttcgttcggtaacgaatcactgcttccgagctctcgttgcgttgagcccggcgcatttg
aaactcatcattgattccattgtctgggcattccgtcacaccgagcgcaacgtcgcggat
gaaggtttgaacttacttttggagatgatgaagtactttcaactctccgaatactgcaat
caattccaccaaagcttctacttgatgacgatgagcgaggtcttcgccgtcatgacggat
ggttttcacaagccaggtttcaaattgcacgctctcattctgcaaaatctcttcactatt
agcgaaagtgatcaattgagtgcgcctctttgggacgttgcggcgaagggggcgggcgct
tatccgtccaacgcggctttcgttcaagagcactgcgcgcagttgttgtgcacctcgttc
ccgaacatgccaccagctgaagttcaaacgttagttctcgcgatgttccaatgcaagaat
gacctcgcggcgttcaagtcaacgttgagggacttcttagtgcagacgaaacaatttagc
agcgtggattttgcagaggaagagcaaagccggttagcggctcagcgacaagcgcggctt
tcagctattccggggatggtcagcggcgcgaacgtcggtgacatggatgacgacgagtag
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