Ostreococcus lucimarinus: OSTLU_30204
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Entry
OSTLU_30204 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10754
replication factor C subunit 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03030
DNA replication
olu03410
Base excision repair
olu03420
Nucleotide excision repair
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSTLU_30204
03410 Base excision repair
OSTLU_30204
03420 Nucleotide excision repair
OSTLU_30204
03430 Mismatch repair
OSTLU_30204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
olu03032
]
OSTLU_30204
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_30204
DNA replication proteins [BR:
olu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OSTLU_30204
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OSTLU_30204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
Rad17
AAA_22
AAA_assoc_2
nSTAND3
RuvB_N
AAA_30
TIP49
TIP49_C
RNA_helicase
AAA_14
AAA_19
NTPase_1
AAA_16
Motif
Other DBs
NCBI-GeneID:
5000458
NCBI-ProteinID:
XP_001416472
JGI:
30204
UniProt:
A4RSL4
LinkDB
All DBs
Position
2:complement(707574..709070)
Genome browser
AA seq
498 aa
AA seq
DB search
MHAYYGIENSANLWTDKFSPRVLADLVGNSSAIATLRTWLSNWPGNQATGKASKVSTRKA
ILISGAPGIGKTTSAILICRELGFQTMNVNASDSRGKTGAVSDGIAGTLASTVREFVTNR
NIGIDGLRSTKTALIMDEVDGMAGGDRGGISELIEVIKHTRIPIICICNDRYSQKLKTLA
NYCVDLPFQRPNKLQLRKYLNQIVASQRLDVDSDAVDALIEANNNDLRSSINQLQLWGMS
SKHHGRNEISKKDVATSVFQAIDVLFRPSPLKTLDERLNLVFQHSDMIPLFVQENYACMR
PRDSTNELQRIVHVAAASSRVAEGDVFATTINKTQNWTMMPPANIVSCVLPTSAVRGSRE
TFGQAERHTHRFPSLLGKLSSKSKSQRLLSELYQHFRSSGRSCSTQLEFCLWYASLTKRL
LTRPLFSQARGGKELDGIPDVLNLMQTYNFTRGDWANIQEITGLSGKGPTFENPNTQIPT
NVKSTFTRSCKRELQFSD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcctactatggtatagaaaattctgcaaatttgtggactgacaaattttctccg
agagtactcgcagacttggtcggaaatagtagcgccatcgctactctccgaacttggctc
tcaaactggccagggaatcaagccacaggaaaagcttcaaaagtgtcgacccgaaaagca
atactcataagtggagcgcctggaattggcaagaccacgagtgccatccttatttgccga
gaacttggatttcaaacgatgaacgtaaacgcaagcgattcaagaggtaagactggagca
gtaagtgatgggatagcgggaacattggcgagtactgttcgagagtttgtaactaatcgt
aacatcggtattgatggtttgcgatcaacaaagactgcactgatcatggatgaagtagat
ggtatggctggtggcgatcggggtggtatctcggagttgatagaagtcatcaaacacacg
cgcattcccatcatatgcatctgcaacgaccgatattcacaaaaactaaagactcttgca
aactattgtgtcgatttacctttccaacggccaaataagctccagctccgaaagtacttg
aatcaaattgtagcctcacaacgcttggatgttgatagcgacgcagttgatgctctcata
gaagcaaacaacaatgaccttcgatccagtatcaaccagctacaactatggggcatgagc
tcgaagcatcacggaaggaatgaaatttcgaaaaaagatgtcgccacaagtgtttttcaa
gcaatagatgttctttttcgtccaagcccattaaaaacactcgatgagaggcttaatctg
gttttccagcactcagacatgatccctctgttcgttcaagaaaactatgcgtgtatgcgc
ccgcgagacagtacaaacgagttgcaaagaattgtgcacgttgctgcggcatcgtcacgt
gtagcagaaggagatgtgtttgcgacgacaataaacaagacacaaaactggaccatgatg
cctcctgcgaacatagtttcatgtgtcctgccaacctctgccgtcagaggctcaagagaa
acatttggtcaggctgaacgccacactcatcgattcccaagtctcttggggaagttgtcg
tcaaagtcaaaatcgcagcggctgttatcagagttgtatcaacattttcgatcaagtggt
aggagctgcagcactcaacttgagttttgcctctggtacgcttctttgacaaaacggttg
ctcactcgtccgctttttagtcaagctcgagggggtaaagaactagatggtataccagac
gtcctgaatttgatgcaaacctacaactttacgcgcggcgactgggcgaatattcaagag
ataacggggctctctggcaaggggcctacctttgagaatccgaatacgcaaatacctacg
aacgtgaaatcgacttttacacgaagctgcaagcgtgaacttcaatttagtgattag
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