Ostreococcus lucimarinus: OSTLU_30206
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Entry
OSTLU_30206 CDS
T01029
Name
(RefSeq) predicted protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_30206
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
OSTLU_30206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
Adaptin_N
HEAT_2
TOR1L1_N
CggR_N
Motif
Other DBs
NCBI-GeneID:
5000131
NCBI-ProteinID:
XP_001416473
JGI:
30206
UniProt:
A4RSL6
LinkDB
All DBs
Position
2:complement(710339..715471)
Genome browser
AA seq
1710 aa
AA seq
DB search
MIQGSADAMEDGEDDVGRSRGKEVARAIAAPQSVMTTTELVTSIDGEALVADFVRAAEDL
CDRIELDDEDASAGDDMDDASGAVMLSELRDFSSRCELLRERGLLKGVGKRDLVKTLSML
ERVAKSANETLIAANAQYRGADAQRVLKSLEAIGAYFVILAATDMPKEIYREEGIDEMIE
CARQHLVRNVFVFYDAGMWNVHRGSDEDGDDVEQDGKKKTPASKSKGVSAPPPPSSSKKS
GSGGYKVAKMLGAKIGVIFTHLANLISLLALPDATVLQLTSLAFSAFEIEDVSFVQLKSV
ELVSSIFTQYSEHRGFVVDNILSSLMKLPTEGRSVRCFNVPGEDSVQIQVLLALLMQCFQ
ATVEFSDDEATMPKADKEGEMTTDVHARAFGSAFYWTNYFWKDLLTRWPKVKAAEHERQI
RAVIHNALVDALTCRNLPEWPVANLLVLNLAGNLLGSAGLQCKDSKIREIALDFLGQIAS
KLRADSKAVEEDAFWRELPRAEDLEFTSNAETLHEKAVMFAHQDAARVRTRVDAQTESAL
VQADEASADIFAMESIIARYLAENNRGPSSTTFTRDDDADEDDENGAAPREGARMSDDTA
SHSRVTLNTSAVSYHLCQFARDAERAGVGFRQEVVAGGSRAMYAALHASMVRVADTAKKA
TNGSLAGLPRELAKSLCLQLNARRPLARQLDVLVQRVTAMLDDASVLVRTSATRAIGGIV
NEDPKLLESPDIVRALKIRLKDTGSSVRAAVVDVIGRQMVRNVSLAEKYYDLIEDRVSDV
GVSVRKRVVSTLQECLRNPDFTKADKAMQVLAFRILDEEETIRSHVVKIFRELWFSPVAL
EDEADDEHDDDEDDGDGNNGSDDEDASTAHLATVGHDGIEDNDPIAIRARQMVSVAWGVY
RLVSRSGKQKLPLLPTFPVVAIISAVLYPSEDEKVDAWVNVRGMRKVAKRLSVQVLHALI
ESESDEQSRAPNGERVKSNGAHNGVVVKDEPGTSKSVPMSVKYALGLHILTVVDPCLCLP
KRDPSYFAVALQPYLKRVDDDAPFVGEKLQCCMSVVHIVAKHAGRLPAPIAKEIERDLRI
LLLRHHDKAVIYYACKTLCAVAETRGGKDSGTMSMLKRFVAIVIESISSDEALSVQNKSH
CARSLYVLGNIARFGADVVDAAVENGECDISIQDLLRVFRKTLESQPAEEYDLTRGALGA
CGDLFVARPELMFNRDGGFGKGSFDSIMRAALASSAERGLKEQALTNLSELIREEEFRMT
ATSGSAAANEVNASTKASVLKSAQKRSRDAEKLQVVNGQSDRSIAGGIAQRYWTDVLALC
VDSAYSVRLKGLHLVEVVLRQGLVHPASAFPTLIALQIDPVPSVKRLARKLLKAQVQRHG
DFFEHQLTHGVELAYSFKKRLETAARRSESGQKKIADASDGFAFVYSLVNSSRTSRNAFL
NTLLRRFETTSGSSDALFLRFLASVVTELPFTSVDETLYVVFQLNRVISLKGGLLLEQLT
KGVEASAAKADDAVPDNEFKSDVELACALSVVLLLKSHVKKAYELSDARVASYVPTEATR
NAEVVKFDDTVKFETGIVDATAGQSYGSARRAVDTFRDLMTRDASDFAEDMFKETATKRG
RKRATKTQADADADAEATPGTPASRRRRRAAVVVDDDDDEEEDEDDDQDENDEDASLPGL
RSAGVTTSKKRAVNSAQKAAKPASKKRLKF
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgattcagggtagcgcggacgcgatggaggatggagaggatgacgtcgggcgatcgagg
ggtaaagaagtcgcgcgtgcgatcgcggcgccgcagagtgtcatgacgacgacggagttg
gtgacgtcgatagacggcgaggcgctggtggcagactttgtgcgcgcggcggaagatttg
tgcgacaggattgaattggatgatgaagacgcgagcgctggcgacgacatggacgacgca
tctggcgccgtgatgctgagcgaacttcgcgactttagctcgagatgtgaattgttgcga
gaacgcgggttgttgaagggcgtcgggaaacgagatttagtcaagacgctgtcaatgttg
gagcgagtcgcaaagagcgcgaacgaaacgttgatcgccgcgaacgcgcagtacagaggt
gccgacgcacagcgtgtgttgaaatcgttggaagctatcggggcgtactttgtcatattg
gcggcgacggacatgccgaaggagatttatcgcgaggaaggcatcgacgagatgatcgag
tgcgcgaggcaacacttggtgcggaatgtcttcgtcttttacgatgccggcatgtggaac
gttcatcgcggcagtgacgaagacggagatgacgtcgagcaagatgggaaaaagaagaca
ccggccagcaagagtaagggcgtctcggcgccgccgccgccctcatcgtcgaagaaatca
ggcagcgggggatacaaggtagcaaaaatgttgggggcgaaaataggcgtcattttcacg
cacttggccaatttgatttccctcctcgcacttccagatgcgacggtactgcagctgacg
tctttggcgttctcggcgttcgaaattgaggacgtgagctttgtgcaactcaagtccgtc
gaactcgtgtcgagcatttttacgcaatactctgagcacagaggcttcgtcgtggacaat
attctgtcgtctctcatgaaacttccgactgaggggcgtagcgtgcgatgttttaacgtc
ccaggcgaagactcagtgcaaatccaagtcttgctcgctctgttgatgcagtgtttccaa
gccacggtggaattttccgacgacgaagcgacaatgcccaaggcggataaagaaggtgaa
atgacgacagacgtgcacgcgcgtgcgtttggatcggcgttttactggacgaactacttt
tggaaagatttgctgacgaggtggccgaaggtgaaagcggcggaacacgagcgtcagata
cgcgcggtgatccacaacgctctcgtggacgcgctcacatgcagaaaccttcccgaatgg
cccgtggcaaacttgcttgtgctcaatctcgccgggaacctgctcgggtctgccggtctg
cagtgcaaagactccaagattcgcgagattgcgctcgatttccttggtcaaatcgcatca
aaacttcgcgctgactcgaaagcagtagaggaggatgcgttctggcgcgagttgccacgc
gcggaggatttagaatttacgtcaaacgccgagacgctgcacgaaaaagcggtcatgttt
gctcatcaagacgcagcgcgcgttcgaactcgagtcgacgcgcaaacggaaagtgcgttg
gtgcaggccgacgaggcgagtgcggatatttttgcgatggaatcgattatcgcgcgctat
ttggcagagaacaatcgaggcccgtcttcaacgacgtttactcgcgacgacgacgcggat
gaagacgacgaaaatggcgcagcaccgcgtgaaggcgcgaggatgtcggacgatacggcg
tctcattcgcgtgtgacgctcaacacttccgcagtatcgtaccatttgtgtcagtttgcg
cgggacgctgagcgcgcgggcgtcggttttcgtcaagaagtcgtcgctggcggttcgcgg
gcgatgtacgcagctctgcacgctagcatggtgcgagtcgcggacactgcgaaaaaggct
acaaatggctcgctggctggacttccgcgcgagctcgccaagtctttgtgtcttcaactc
aacgctcgacgaccgttggcaagacagctcgacgtgctcgtgcagcgcgtgacggctatg
ctcgatgacgcgagcgtcttggtgcgcacatcagcgacaagagcaatcggtggtatcgtg
aacgaagacccgaaactgttagagtctccggatatcgttcgcgcgctgaaaatccgattg
aaagatacgggatcgtccgtgcgagccgccgtggtggatgtcatcggcagacagatggtg
cgaaacgtcagtcttgccgaaaagtactacgacttgattgaagaccgcgtatccgacgtc
ggtgtatctgtgcgcaagcgcgtggtttccaccctgcaagaatgcctgcgtaatcctgac
tttactaaagcggataaggcgatgcaagtgttggcgtttcgcatactggatgaagaagaa
acgatccgttcgcacgttgtgaagatttttcgcgagctttggttttcaccggttgcattg
gaagacgaagccgacgatgaacacgatgacgacgaagatgatggggacggaaacaatggc
agtgatgacgaagacgcatctacggcgcacttagccaccgttgggcatgatggtatcgag
gataatgatccaatcgcgattcgcgcgcggcaaatggtctccgtcgcttggggcgtctac
cgactcgtttcccgaagcggcaaacaaaagcttcctttacttcccacgtttccggtcgtt
gcgatcatcagcgcggtgctgtatccgagcgaagacgagaaggttgatgcatgggtcaat
gttcgcggtatgcgaaaggtagcgaagcgtttatcggtgcaggtgttgcacgcgctcatc
gagagcgaatccgacgagcaaagtcgcgcgccaaacggtgaacgagtcaaatcgaacgga
gcacacaatggcgtggtcgtgaaagacgagccgggcacgtcgaagtcggtgccgatgagc
gtcaagtacgcactcggtctccacattctgaccgtcgtcgatccgtgtctctgccttccg
aaacgcgacccatcgtatttcgccgtggcgctccagccgtatctgaagcgggtcgacgac
gacgcgcctttcgtcggtgagaagctccagtgctgcatgtccgtcgtgcatattgttgcg
aaacacgctggtcgtcttccagcgccgattgcgaaagagatcgaacgagacttgcgcatc
ctcttactccgccatcacgacaaagctgtcatttattacgcgtgtaagacgttgtgcgcc
gtggcggagactcgcggcggtaaggatagtggaacgatgtctatgctgaaacgattcgtt
gccatcgtcatcgaatccatatctagtgatgaagcgttgagcgttcagaacaaatcgcac
tgcgcgcgttcgctgtacgtattgggtaatattgcgcgatttggagccgacgtcgtggac
gcggccgtcgaaaatggtgaatgcgatatctcgattcaggatcttcttcgagtcttccgc
aagaccctggagtctcagcctgcagaagagtacgatctcactcgtggagcgctcggggcg
tgcggagacttgttcgtcgctcgaccagaactcatgtttaatcgcgacggcggtttcggc
aaaggaagctttgattccatcatgcgagccgcgttggcatccagcgccgagcgtggcttg
aaggagcaggcgctgacgaatctcagcgagctcattcgagaggaagaatttcgtatgact
gcgacgagtggatcggcggcggccaatgaagtcaacgcttccactaaggcttcggtgctc
aagtcggcgcaaaagcgctcgcgagacgcggaaaaattgcaagtcgtcaacggccagagt
gatcgttctatcgccggcggtatcgcgcaacgatattggacagatgttttagcgctttgc
gtcgactccgcgtacagcgtgcggttgaaaggcttgcatttagtcgaggtggtccttcgt
caaggcttggttcacccggcaagcgcgttccccacgctcatcgcgctacaaatcgaccca
gtgccgagcgttaagcgtctcgcgcgtaagctcctgaaggcgcaagttcaacgacacggt
gacttttttgagcatcagctcactcacggcgtcgagcttgcgtactctttcaagaagcgt
ctggaaacggcggctagaagaagcgaaagcgggcaaaagaaaatcgccgacgcctcggac
ggtttcgcgtttgtctacagcttggtgaactcgtctagaacgtcccgaaacgcgttcttg
aacactcttttgcgtcggtttgaaaccacgagcggatcgtccgatgcgctattcttgcga
ttcctagcgagcgtcgtcaccgagcttccgttcacatcagtggatgagactctctacgtc
gtctttcagctcaatcgcgtcatatcgctcaagggcggcttgttgctcgaacagctcacg
aagggcgtggaagcgtcggcggccaaggcggacgatgcggtgccagataacgaattcaag
agcgacgtcgaactcgcgtgtgcgctgagcgtcgttttgttgctcaaatctcacgtcaag
aaggcgtacgagttgtccgacgctcgcgtggcgtcgtacgtccccacggaggcgacgaga
aacgcagaagtcgtgaaattcgacgataccgtgaaatttgagaccggtattgtcgacgca
accgctggacaatcctacggctcggctcggcgcgcggtcgacacgttccgcgatctcatg
actcgcgacgcgagcgatttcgccgaagacatgttcaaagaaacggcgacgaagcgaggc
cggaagcgcgcgacgaagacgcaggccgacgccgacgccgacgccgaggcgactccgggg
actccagcgagccgacgtcgacgtcgcgcagccgtcgtggtggacgacgacgacgacgaa
gaggaagacgaagacgacgaccaggacgaaaacgacgaagacgcctcgctgccgggcttg
cgctccgcgggcgtgacgacgtcgaaaaagcgcgccgtcaactccgcgcaaaaggcggcg
aaaccggcgtcgaagaaacgattaaaattttag
DBGET
integrated database retrieval system