Ostreococcus lucimarinus: OSTLU_30316
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Entry
OSTLU_30316 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSTLU_30316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_30316
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OSTLU_30316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
WD40
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
5000369
NCBI-ProteinID:
XP_001416280
JGI:
30316
UniProt:
A4RSB0
LinkDB
All DBs
Position
2:876677..879127
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AA seq
816 aa
AA seq
DB search
MKDSVLITPARECLRAHDVEGGGRGRRVVVARGAEQTCACASPYSQTHVVTGSADGTLSV
WDVETKKTVRSYAFPCAIYDVVYPGGESGKDYAYVSASAREDGGGRVYKVSLSKGKIVEK
LGKTSRPCKLVASASGAFVACVERRTMYVWGVGKDRVGVASRALRVHHTKGVTALAFSHD
DEILAAGDSSGRIVMWHGFARAVRKLQSEAQGEETEVKGDALPSTTSHWHSRAVGCLHFS
ADGAHLFSGGEEAVLVIWTVKDGKKTYLPRLGAPLTKIVARREDPSRLALFGSDNALRLV
NVASMTVEGTIQGVRPPVLDAKSTKSADGVAYASVVAYDPRADVLAFSAAGAALQFYDYA
RDNHIADLAVAPRNYVNTSGEEDSPLESHVAHASFSRDGRVLVTVDRRSDQPPSVTSAIE
ETLKIWERLDTTDEDENADVVVPGGAFTCVAQCEIPHKGLITSVGVRPSAHSLEESMAFT
AGVEGEVKIWIPNGRVSRGGEHAGWRCRSSASHPSGSAITCGAFSADGSILATAANEIVL
WDPKTNAKLATLTMPKSSPDGEPENPIKAVAFSADEPLFAACDGTTLVFWNLQTLQPWRV
YSAPCVDLFAHPSVAMFVAVFAPQRSSEDVEGVENAAVVVRFTGRDATPASAYACRDGAP
EAVIFPPGDRSDRAAAATSLESSTPMLVITRDRQIIRVGAETNREARVRDDMDIDLKLAT
KTFPGGVAVVGAPANPQLKEYLADTEASVRALNLSTEDDDDVPAHERVIGGALQGVGKMP
WGALFDSPSHELPPLTTLCPRFMDAMLVRQAKPDAE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgtgctgatcacgcccgcgagggagtgcctgcgcgcgcacgacgtcgag
ggcggtggacgagggcgacgcgtcgtcgtcgcgcgcggggcggagcagacgtgcgcgtgc
gcgtcgccgtattcgcagacgcacgtcgtcacggggagcgcggacgggacgctgagcgtg
tgggacgtggaaacgaagaaaacggtgcggagttatgcgtttccgtgcgcgatatacgat
gtggtgtatccaggaggggagagcgggaaggattacgcgtacgtatcggcgagcgcgcgc
gaggacggcggcggacgcgtgtacaaggtgagtttatctaaagggaagattgtggagaag
ttaggaaagacgtcgagaccgtgcaagttagtcgcgagcgccagtggcgcgttcgtggcg
tgcgtggaacgacgaaccatgtacgtgtggggggtgggcaaggatcgcgtaggcgtcgcc
tctcgcgcgttgcgcgttcatcacaccaagggcgtcaccgcgctcgcgttctcgcacgat
gacgagatcttagccgccggggactcgagcggaagaattgtgatgtggcacggattcgcg
cgcgccgtgcgcaaattacaaagcgaggcgcagggcgaggaaactgaggtcaagggcgac
gcgttgccgagcacgacgtcgcactggcactctcgcgccgtcgggtgcttgcacttttcc
gcggacggcgcgcatttgttttccggcggtgaagaggcggtgttggtgatttggacggtg
aaagacgggaaaaagacatatttaccgcgtttaggcgcgccgttgacgaaaattgtggcg
cgacgcgaagatccctcgcgactggcgctcttcggttcggacaacgccttgcgactggtg
aacgtcgcgtcgatgaccgttgaagggactattcagggcgtgcgtccacccgtacttgat
gcaaaatcgacaaagagcgccgatggcgtggcgtacgcgtccgtagtcgcgtatgatcct
cgcgcggatgtgctcgcgttttccgccgccggcgccgcgttgcagttttacgactacgcg
cgagacaaccacatcgccgatctcgcggtagcgccgagaaactacgtcaacacgagcgga
gaagaagactcgccgctagaatcacacgtcgcacacgcgtcgttttcgcgcgatgggcgc
gtgctcgtcaccgtggacagacgcagcgatcaaccgccgtcggtgacgagcgcgattgag
gagacgctgaaaatttgggagcgtcttgacacgacggatgaagacgagaacgccgacgtc
gtcgttcctggtggcgcattcacgtgcgtggcgcagtgcgaaatacctcacaaaggtttg
atcacgtccgtcggcgtacggccgagcgcgcacagcctcgaggagtccatggcgttcacc
gccggcgtcgagggggaggtgaagatttggatcccgaacggtcgagtttcgcgaggcggc
gagcacgcgggatggagatgccgatcgagcgcctcacatccgagtggatcagcgatcacg
tgcggcgcgttcagcgccgacggctctattctcgccacggcggcgaatgaaatagtgctc
tgggatcccaagacgaacgccaagctcgcgacgttgacaatgccgaagtcgtcgccagat
ggggagcccgagaacccaatcaaagcggttgcattcagcgctgatgagcctctattcgcc
gcctgcgacggaacgacgctggtgttttggaatttgcaaactttacagccatggcgcgtc
tactcggcgccgtgcgtcgatttgttcgcgcatccgtctgtggcgatgtttgtcgctgta
ttcgcgccgcagcgatcgagcgaagatgtcgaaggtgttgaaaacgctgccgtcgtcgtg
cgattcaccggtcgggacgccacgcccgcgagtgcgtacgcgtgccgcgacggcgcgccg
gaagcggtgattttcccgccgggcgatcgctccgaccgcgccgccgccgcgacgtcgctc
gagtcttcgacgccgatgctcgtcatcacgcgcgacagacaaatcatacgagtaggtgct
gagacgaaccgcgaggcgcgcgtgcgagacgatatggatatcgaccttaagctcgcgaca
aagacgttcccgggcggcgtcgccgtcgtcggcgcgcccgcgaacccgcagttgaaggaa
tacctcgccgacaccgaagcgagcgttcgtgcgctcaatctcagcactgaagacgacgac
gatgttccagcgcacgagcgcgtcatcggcggcgcgcttcaaggcgtgggtaagatgcct
tggggcgcgctcttcgactcgccctcgcacgagttgcccccgctcacgacgctgtgcccg
cgtttcatggacgccatgctcgtgcgacaggccaaacccgacgcggaatga
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