Ostreococcus lucimarinus: OSTLU_30338
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Entry
OSTLU_30338 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OSTLU_30338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_30338
Enzymes [BR:
olu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
OSTLU_30338
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
OSTLU_30338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
MMR_HSR1
AAA_16
ATP_bind_1
AAA_24
Motif
Other DBs
NCBI-GeneID:
5000553
NCBI-ProteinID:
XP_001416530
JGI:
30338
UniProt:
A4RTP7
LinkDB
All DBs
Position
3:25974..27263
Genome browser
AA seq
429 aa
AA seq
DB search
MASDGDDGIAVQTFTLEQEQELRVETPARGEIKLKLVDGTAEVFGAEIAVGQSITCVSGR
KLAVFTYHGATIEVRGEVEIAYVAGETPMVSYANTHSVLNAKRVAAASENSSEAEGPRVM
CVGPTDVGKSTVCSILCNYATRAGHAPLYVDLDLGQGAVTVPGTICAAPIDAQIDLEEGI
PLEMPLVYFYGDLTVNNPDYYKHIVSRLGTMLDERSKANEEARAAGCVVNTMGWIDGVGL
ELLLHAREALKIDHVLVIGQERLFGQLQQKLKGTDCQVFRLQKSGGVVERTPEYRRASRD
RMFKEYFYGATGELAPASQTAYFSKISIYRIGGGPRAPTSALPIGQAPSTDPMRVTPVVP
STSLLHSVLAVSHGKTQGDLLTSNVAGFIYITEVNMMQKSFTYLSPCPGELPSNVLLSGN
LKWLGEDVK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgatggtgacgatggcatcgccgtgcagacgttcacgctggaacaagaacaa
gaactgcgcgtggagacgcccgcgaggggggagataaagctcaagctcgtcgatggcacg
gcggaagtcttcggggcggagatcgccgtcgggcagagcattacgtgtgtttcgggacgt
aaactcgccgttttcacctatcacggcgcgacgatcgaagtgagaggagaggtagagatc
gcgtacgtcgccggggagacgccgatggtgagttacgcgaacacgcactcggttttgaat
gcgaaacgcgtggccgcggcgagcgagaattcgagcgaagccgagggaccgagggtaatg
tgtgtcggaccgacggacgtgggtaagagcacggtgtgttctatattatgtaactacgcc
acgcgcgccggacacgctccgctgtacgtggatttagatttaggacagggcgcggtcacg
gtgccgggaacgatttgcgccgcgccgattgacgcgcagatagacctcgaagagggaata
ccgctggagatgcctctggtgtacttttacggcgacttgactgtgaataatcccgattac
tataagcacatcgtctcgaggttgggcactatgctagacgagcgaagcaaggcaaacgaa
gaggcgcgcgcggctggatgcgtggtgaatacgatgggttggatcgatggcgtcggcctg
gagctcttgcttcacgctcgagaggcgctcaagattgatcacgtccttgtcattggtcag
gagcgtttgttcgggcaactgcagcaaaaacttaagggaacggactgccaagtgtttcga
ctgcaaaagtctggcggcgtcgttgaacgcacgcccgagtaccgccgagcatctcgcgat
cgcatgttcaaggaatacttttacggcgctaccggcgagctcgcaccggcgtcgcagacg
gcttatttctcgaaaatcagcatatatcgcatcgggggtggtccgcgagcgccgacgtcc
gcgttgccaatcggtcaagctccgtccacggatcccatgcgagtcactcccgttgtgcct
tccacgtcgcttttgcactccgtcttagcggttagtcacgggaaaacacagggggacttg
ctcacttcgaacgttgctggtttcatttatatcaccgaggtgaacatgatgcagaaatcg
ttcacgtatctgtcgccgtgcccgggcgaattgccgtcaaacgtcttgctctctggtaac
ttgaaatggttaggcgaagatgtgaagtag
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