KEGG   Ostreococcus lucimarinus: OSTLU_30338
Entry
OSTLU_30338       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    OSTLU_30338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_30338
Enzymes [BR:olu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     OSTLU_30338
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     OSTLU_30338
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA MMR_HSR1 AAA_16 ATP_bind_1 AAA_24
Other DBs
NCBI-GeneID: 5000553
NCBI-ProteinID: XP_001416530
JGI: 30338
UniProt: A4RTP7
LinkDB
Position
3:25974..27263
AA seq 429 aa
MASDGDDGIAVQTFTLEQEQELRVETPARGEIKLKLVDGTAEVFGAEIAVGQSITCVSGR
KLAVFTYHGATIEVRGEVEIAYVAGETPMVSYANTHSVLNAKRVAAASENSSEAEGPRVM
CVGPTDVGKSTVCSILCNYATRAGHAPLYVDLDLGQGAVTVPGTICAAPIDAQIDLEEGI
PLEMPLVYFYGDLTVNNPDYYKHIVSRLGTMLDERSKANEEARAAGCVVNTMGWIDGVGL
ELLLHAREALKIDHVLVIGQERLFGQLQQKLKGTDCQVFRLQKSGGVVERTPEYRRASRD
RMFKEYFYGATGELAPASQTAYFSKISIYRIGGGPRAPTSALPIGQAPSTDPMRVTPVVP
STSLLHSVLAVSHGKTQGDLLTSNVAGFIYITEVNMMQKSFTYLSPCPGELPSNVLLSGN
LKWLGEDVK
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggcgtccgatggtgacgatggcatcgccgtgcagacgttcacgctggaacaagaacaa
gaactgcgcgtggagacgcccgcgaggggggagataaagctcaagctcgtcgatggcacg
gcggaagtcttcggggcggagatcgccgtcgggcagagcattacgtgtgtttcgggacgt
aaactcgccgttttcacctatcacggcgcgacgatcgaagtgagaggagaggtagagatc
gcgtacgtcgccggggagacgccgatggtgagttacgcgaacacgcactcggttttgaat
gcgaaacgcgtggccgcggcgagcgagaattcgagcgaagccgagggaccgagggtaatg
tgtgtcggaccgacggacgtgggtaagagcacggtgtgttctatattatgtaactacgcc
acgcgcgccggacacgctccgctgtacgtggatttagatttaggacagggcgcggtcacg
gtgccgggaacgatttgcgccgcgccgattgacgcgcagatagacctcgaagagggaata
ccgctggagatgcctctggtgtacttttacggcgacttgactgtgaataatcccgattac
tataagcacatcgtctcgaggttgggcactatgctagacgagcgaagcaaggcaaacgaa
gaggcgcgcgcggctggatgcgtggtgaatacgatgggttggatcgatggcgtcggcctg
gagctcttgcttcacgctcgagaggcgctcaagattgatcacgtccttgtcattggtcag
gagcgtttgttcgggcaactgcagcaaaaacttaagggaacggactgccaagtgtttcga
ctgcaaaagtctggcggcgtcgttgaacgcacgcccgagtaccgccgagcatctcgcgat
cgcatgttcaaggaatacttttacggcgctaccggcgagctcgcaccggcgtcgcagacg
gcttatttctcgaaaatcagcatatatcgcatcgggggtggtccgcgagcgccgacgtcc
gcgttgccaatcggtcaagctccgtccacggatcccatgcgagtcactcccgttgtgcct
tccacgtcgcttttgcactccgtcttagcggttagtcacgggaaaacacagggggacttg
ctcacttcgaacgttgctggtttcatttatatcaccgaggtgaacatgatgcagaaatcg
ttcacgtatctgtcgccgtgcccgggcgaattgccgtcaaacgtcttgctctctggtaac
ttgaaatggttaggcgaagatgtgaagtag

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