KEGG   Ostreococcus lucimarinus: OSTLU_30495
Entry
OSTLU_30495       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03040  Spliceosome
olu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OSTLU_30495
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    OSTLU_30495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:olu03041]
    OSTLU_30495
   04121 Ubiquitin system [BR:olu04121]
    OSTLU_30495
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_30495
Enzymes [BR:olu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     OSTLU_30495
Spliceosome [BR:olu03041]
 Complex B
  Other components
   Prp19 complex
    OSTLU_30495
 Complex C
   Prp19-CDC5 complex
    OSTLU_30495
Ubiquitin system [BR:olu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   OSTLU_30495
DNA repair and recombination proteins [BR:olu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    OSTLU_30495
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 DSE1_N WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_RIG_2nd CFAP251_N Beta-prop_DCAF4 U-box Beta-prop_WDR41 ASA1 WDR90_beta-prop_4th B-prop_COPA_B_2nd Ge1_WD40 Beta-prop_NWD2_C eIF2A TRM82_WD DUF1513 Beta-prop_LRRK2 WDR54 LdpA_C
Other DBs
NCBI-GeneID: 5001033
NCBI-ProteinID: XP_001416612
JGI: 30495
UniProt: A4RU49
LinkDB
Position
3:join(286024..286119,286253..287593)
AA seq 478 aa
MFCAISGAAPARPVVTPRGVLYERSLIVKAIEERGECPVTKESLSVDDLIELKAQKWVNP
RPEATMSVPGLLSAFHNEWDALMLETHTLRKELQTTRQELSHALYQHDAACRVIARLMKE
RDDARDALANAKGSAKRSAAGDAEPESKKVKAGLPAAVVAKMNDVQKELSSGRKKREISS
ELATMGDISAYEAKVTQAVHKTSPAGINAVAIKAGDDNVIATAGNDHTVAIFDKVSSQRV
QQLSGHSKKVLDVKFVGDNVLSCGADKVVKLWGADGSEIATFGDHTGDVTSVSVHPSNSY
FVSTSTDKTWGFHDLTTSSCITLVNDDTDSAITCANFHPDGVILGAGTKDSVVKLWDAKD
ARKLLQLDGHASEITGLSFSENGYYLASAAKDGVKIWDLRKSKLVHEIECAGAQGVAFDH
SGSYIATGGHNASVYQVKGKWELVKEFEVKKAVKAVAFGGDARSLVVASADHNLRIFA
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgttttgcgcgatcagtggggcggcgccggcgcgcccggtggtgacgccgagaggcgtg
ctgtacgagagatcgttgatcgtgaaggcgatcgaggaacgaggcgagtgcccggtgacg
aaagaatcgctgagcgtggacgatttgatcgaactcaaggcgcagaaatgggtgaacccg
cgaccggaggcgacgatgtcggtgccagggttgttgagcgcgtttcacaacgagtgggac
gcgttgatgctagaaacgcacacgctgcggaaggaattacaaacgaccaggcaagagttg
agtcatgcgttgtaccaacacgatgccgcgtgtcgagtgatcgcacggttgatgaaggag
agagatgatgccagagacgcgctcgcgaacgcgaaggggtcggcgaagcgaagcgccgcg
ggggacgccgaaccggaatcgaaaaaggtcaaggcgggacttccggcggctgtcgtggcg
aaaatgaatgacgtgcagaaggaactttcgagtggacgcaagaagcgcgaaatttcgagc
gaattggcgacgatgggggatatctcggcgtacgaagccaaggtgacgcaagctgtgcac
aagacgtcgcctgcaggcatcaacgccgtggcgatcaaagcgggcgacgataacgtcatc
gccacggcgggtaacgatcatactgtggcaatctttgacaaagtaagctcgcagcgcgtt
cagcagctcagcggacattccaagaaggttctcgacgtcaagtttgtcggcgacaacgtg
ttgtcgtgtggcgcggacaaagtcgtcaagctttggggtgccgatggctctgagattgca
acgttcggtgatcacactggtgatgtaaccagcgtcagcgtgcatccctcgaacagctat
tttgtgtccacttcaacggacaagacttggggatttcacgaccttaccacgagctcgtgc
atcaccttggtgaacgacgacaccgattctgccatcacgtgcgcaaatttccaccccgat
ggtgtgattttgggagcgggcacgaaggattcggtagttaagctttgggatgctaaagat
gcgcgcaagttgcttcaattagacggccatgcgagcgagattaccggtttgtctttctcg
gaaaatggctactatctcgcctctgcggctaaggacggtgtgaagatttgggaccttcga
aagtccaagctcgttcacgagatcgaatgtgctggcgcacagggcgttgctttcgaccac
agcgggtcttacatcgccactggcggtcacaatgcgtccgtttaccaggtgaaaggcaag
tgggaattggtcaaggagtttgaggtgaagaaggctgtcaaggctgtcgccttcggcggc
gacgcgcggtcgctcgtcgtcgctagtgccgaccataacttgcgtatcttcgcttag

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