Ostreococcus lucimarinus: OSTLU_31151
Help
Entry
OSTLU_31151 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_31151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_31151
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OSTLU_31151
Spliceosome [BR:
olu03041
]
Complex C
Other components
Step II factors
OSTLU_31151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
AAA_22
DEAD
AAA_19
nSTAND3
ABC_tran
GIPC1_GH2
AAA_16
AAA_30
Cas3-like_C_2
PhoH
T2SSE
Flavi_DEAD
TsaE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
5001507
NCBI-ProteinID:
XP_001417493
JGI:
31151
UniProt:
A4RVY8
LinkDB
All DBs
Position
4:complement(396526..399933)
Genome browser
AA seq
1135 aa
AA seq
DB search
MAALAKLAQLSLVNKVTKELENHLGIADKTLSEFVIALTDENDTPVTFRKALGAVGAEVD
DAFAESLLGLIQRMRKKPSGTARGTNAATAGSAGTSGRSSGDANFPGLAVRDDDSHAKAL
TRELYGDRDALANAADDPSKSERANEREVSHSLASAQTKSDEKTRDGEPSVGGVYRGRVT
NVMDFGAFVELVEFKRKAEGLVHVSAITDRHLKSAKDGARRGESVFVKVLNRNGNKISLS
MKDVDQISGKETARATFGGNRSNPAPRNLPPPGPSAAGGMASLKGLSGIDASTLDEANTA
SRKRPAKRLSSPELWEARQLIASGVLKVQDYPQFDPENDGMLSYEEEAEEEVEIEINEDE
APFLQGQTAASTGDVSPIKIVKNPDGSMQRAAMTQATLAKERRELRDQQQRANTEAEGQV
AARPWEDPMRRQGDASLTEEARQYGGSRGGRDMPAWKAKSMGQGQRMGQPQTMPIHQLRQ
TLPIYKLRDQLIQAVNENQILVVIGETGSGKTTQMTQYLAEAGYTSRGRIGCTQPRRVAA
MSVAKRVAEEYGCRLGEEVGYAIRFEDCTSQDTVIKYMTDGMLLREALLDDLLSQYCVIM
LDEAHERTIHTDVLFGLLKKCCAKRKDLKIIVTSATLDAEKFSTYFFDCPIFTIPGRTFP
VEVLYTKAPESDYLDAALITVMQIHLTEPEGDILLFLTGQEEIDAAAEILFDRMRALGPA
VPELHVLPVYSALPSEQQTRIFEPAPPGSRKCVIATNIAEASLTIDGIFYVVDPGFSKQK
VYNPKISMDSLIVAPISQASARQRAGRAGRTGPGKCYRLYTESAFKNEMLPTSVPEIQRT
NLSMTVLTMKAMGINDLINFDFMDPPPPATLVTALEQLYNLGALDEEGLLTRLGRKMAEF
PLEPPMSKMLIASVDLGCSEEILTIVAMLSAQNIFHRPKEKQAQADAKKNKFFQAEGDHL
TLLSVYEAWKAQGFSEPWCYENFLQARSMKRAQDVRKQLLTIMDRYKLGTTSAGRNYNKV
RKAICSGFFFHGAKKDPQEGYKTIVEQTPTYIHPSSALFQRQPDWVIYHELVLTTKEYMR
EVCAIDPKWLVELAPRFFKLSDPRHLSKRKKSEKIEPLYDRYNDPNAWRLSKRRG
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcgccaaactcgcgcagctctcgctcgtgaacaaagtcacgaaggagctc
gaaaatcacctcgggatcgccgataagacgctgagcgagttcgtcatcgcgctcacggac
gaaaacgacactccggtgacgtttcggaaggcgcttggcgcggtcggcgcagaagtggac
gatgcgttcgcggaatctttgcttgggctgattcagcggatgcggaagaagccgagcggg
acggcgcgcgggacaaatgcggcgactgcgggaagcgcggggacgtctggaaggtcgagc
ggcgacgcaaactttcctggacttgcggtgcgggacgatgattcgcacgcgaaggcgttg
acgagggaattatacggggaccgggacgcgctcgcaaacgcggcggacgacccgagcaag
agcgaacgggcgaacgagagggaggtttcgcactcgcttgcgagcgcgcagacgaagagc
gatgagaagacgcgagatggtgagccaagtgtgggtggggtgtaccgcggaagggtgaca
aatgtgatggatttcggagcctttgtggagttggtggagttcaagcgcaaggcggagggc
ttggtgcacgtgagcgccattaccgatcgacacctgaaaagcgcaaaggacggcgcgagg
cgaggtgagagcgtgtttgtcaaagttttgaatcgtaacggaaacaagatatcgctgtcg
atgaaggatgtggaccaaatctcggggaaggagactgcgcgcgccacgtttggcggtaac
agaagtaatccagcgccgaggaatttaccgccacccgggccgtcagcagcagggggaatg
gcgtcacttaaaggcctttctggcatcgatgccagcactttggatgaagcaaacacagcc
tcgcgcaaacgacctgcaaagaggctgagttcgccggagctgtgggaagctcggcagctc
atcgcgagcggggtgttgaaggtgcaagactatccgcaattcgatccggaaaacgacggc
atgctatcctacgaagaagaagctgaagaggaagttgaaatcgagatcaacgaagacgag
gcgccgttcttgcagggacaaactgcggcgagcacgggtgacgtttcgccgattaaaatt
gtcaaaaacccagatggttccatgcaacgcgccgccatgacgcaagccacgctggcgaaa
gagcgacgcgagcttcgcgatcagcagcagcgagcaaatactgaggccgagggtcaagta
gcggcgcgtccgtgggaggatccgatgagaagacagggcgatgcgtcgttgacagaggag
gctcgacagtacggcggcagtcgcggaggccgcgatatgcccgcttggaaggccaagtcc
atgggccaaggtcaaaggatgggccagccacagacgatgcccattcatcaattacggcag
acgctaccgatttataaactgcgcgatcaattgattcaagcggtgaatgaaaatcagatt
ttagtggtgattggcgagacgggttcggggaaaacgacgcagatgacccaatacttggcc
gaggctgggtatacgtcacggggtagaataggatgcacgcaaccaaggcgtgtggccgca
atgtccgtagccaagcgtgtcgccgaggagtacggctgtcgactcggtgaagaggttggt
tacgcgattcgtttcgaagactgcacgtcacaggacacagttatcaagtacatgaccgat
ggtatgctacttcgcgaggctttgttggatgacttgttatcgcagtattgcgtcatcatg
ctcgatgaggcacacgaaagaacgatccacacggacgtattgttcggattgctgaagaag
tgctgcgcaaagcgaaaagacttgaaaatcatcgtgacgtcagctactttggacgccgaa
aagttttcgacgtactttttcgattgccccattttcaccattcctggtcgaacgtttcct
gtcgaagtattgtatactaaagctcccgagagcgactatcttgatgccgctttgatcacg
gtgatgcaaatccacctcacagagcccgagggcgacatcttactgttcctcacgggtcaa
gaagagattgatgcggctgcggagattctattcgatcgtatgcgcgcattaggtccagcg
gttccagagttacacgtcttgccggtgtactctgctcttcctagcgaacagcagacgcgc
atttttgagccggcgccgcccggcagtcgcaagtgcgtcatcgcgacaaacattgccgaa
gcctcgctcactattgacggcatcttctacgtcgtcgatcccgggttttcaaaacaaaaa
gtgtacaatcctaagatttccatggactctctcatcgtggctccgatttcacaggcttca
gctcgacagcgagccggtcgcgccggtcgtacaggtcccggcaagtgttatagattgtac
acggaaagtgcgttcaagaacgaaatgctcccgacatcggtgccagaaattcaaaggacg
aacctgagcatgacggtgctgacgatgaaagctatggggatcaacgacttgattaatttt
gatttcatggacccgcctccaccggcgacgctcgtcacggctttggagcaactgtacaat
ttaggcgcgttagatgaggaaggcttgctcactcgactcgggcgcaagatggcagagttt
ccattggagccgccgatgagtaagatgctcatcgcgagcgttgatctcgggtgttctgag
gaaattttgaccatcgtcgccatgctgagcgctcaaaatatcttccaccgcccgaaggaa
aagcaagcgcaggcggacgcgaagaagaacaagtttttccaagccgaaggcgaccatttg
acattgttgtcggtgtatgaggcgtggaaggctcaaggtttcagcgaaccttggtgttac
gagaactttttacaggcgcgttcgatgaagcgcgcgcaagacgtccgtaaacaacttctc
accatcatggatcgatacaagctcggcaccacgagcgctggacgcaactacaacaaagtt
cgcaaagccatctgctcgggtttcttcttccacggcgccaagaaagatccgcaggagggt
tacaaaaccatcgtcgagcagactccgacgtacattcacccctcgagcgcgctcttccaa
cgtcagcccgactgggtcatctaccacgagctcgtgctcacgaccaaggagtacatgcgt
gaagtctgcgccatcgaccccaaatggctcgtcgagctcgctccgcgctttttcaagctc
agcgaccctcgccatctgagcaagcgcaaaaagagcgagaaaatcgagcccctgtacgat
cgctacaacgatccgaacgcgtggcgattgagcaagcgtcgcggctga
DBGET
integrated database retrieval system
