Ostreococcus lucimarinus: OSTLU_31967
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Entry
OSTLU_31967 CDS
T01029
Name
(RefSeq) predicted protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OSTLU_31967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_31967
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OSTLU_31967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
DUF294_C
AAA_16
UBA_ARI1
Motif
Other DBs
NCBI-GeneID:
5002234
NCBI-ProteinID:
XP_001418141
JGI:
31967
UniProt:
A4RYB5
LinkDB
All DBs
Position
6:join(43621..45577,45635..46554)
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AA seq
958 aa
AA seq
DB search
MYRLSNAMDDGRFDPSSLRIEDGDFSKINGEFAKQFWRIKMQLMDCVVMVKHGSFYNMFD
VDADAGKAVGLQQTGTNSGFMRKVGCRAESFDTWAARLLARGYTVARVEQMSEAARETSV
MKRECCEILTPSLDRGLTNNERANFFITIAGSSVKSLHSCDYLGVCAVDADSGTAALGVV
TPQDLHTVLVQYEPREVVISEQLSDDARKMLVSYVREGGDATDCVLRVIERGKVKNPSIE
RSNILNWFKYHTDEPVSNILQEATEAELRAVGFAMRHLAWCGVLQDVFSRTKFMSIVSVE
PRRTNAEENQSAFALSRELTHVMRLDGDAIKNLHLLYGDTGKTTGSLYEFLNHTFTAPGR
RRLRQWLLRPLQDVRAIDARLDVVREFSNNHVLLQTFRDRLKHFKWDHERLFAKSCRLAI
KCTKVYNIVRFNQTSPLTQEDEMGLRELAPKGATKLEEILIDAVNMISFWEMHKSALVTF
VDLVRALIEIRDVVSTLSEIAERNVSVASLHRDVEDAISFLRELRSCLEDRRKENTKNKE
RYIVPSALVFRDYGEFAAAAERERAQDPIVRKHAQRQRRELLRNIYIPLSDDDERDDEEQ
DAADRADLAAANAFTEVMHAFYEEIPRFERVVSAMADLDVLQSFATSCASSRELVCSWHP
LLKPSMVDDAKRITHNSGIVDNDVSMKTPFVLLTGPNMSGKSSILRQVAIIVIMAQIGCY
VPAASCEISVADAVMTRLGGDDNFANGVSTFLNEMKSTAKIMNDVTSSTLVILDELGRGT
STLDGYSIAFATSLELCSCAQAPRVLFATHYHELDKDLARQEIARGKFVTKHIDVSSTRS
GALKMTYKLKNGPAPLGSCALNVARLAGFPPGILTRASHVSQTVTFKGRVKDSGFSRSSY
VPPKALLSNEEHLMLSALLGDPALTGDADRLGDGVEWCRRFHALWRKCNDLSNRANEP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtatagattgtcgaacgcgatggacgacggccgattcgatccgtcgagtttgcgaatt
gaagacggcgatttttcaaagattaacggtgagtttgcgaagcagttttggagaattaag
atgcagttgatggattgcgtcgtgatggtaaagcacggatcgttctataacatgtttgat
gtggacgccgacgccgggaaggcggttggacttcagcagacggggacgaattcaggattc
atgcgcaaggttggctgtcgggcggagtcgttcgatacgtgggcggctcgtttactcgct
cgtgggtacacggttgcccgggtggaacagatgagcgaagcggcgagagagacctcggtg
atgaagcgggagtgttgcgaaatattgactccctcgctcgatcgcgggctgacgaacaac
gagcgcgcgaatttcttcatcaccatcgcgggaagctccgtgaaatctttgcactcgtgc
gactatttgggtgtgtgcgcggttgacgcagattctggcaccgccgcgttgggtgtcgtg
acgcctcaagatctgcacaccgtcttggtgcaatacgagccacgagaggtcgtgattagt
gaacagctttctgacgacgcgagaaagatgctcgtgtcgtacgtgcgtgaaggcggtgac
gcgacagactgcgttttacgcgttatagaacgtggcaaagtgaaaaacccgtcgatcgag
cgctcgaacattctgaattggttcaaatatcacaccgacgagcccgtttcaaatattctt
caggaagccactgaggcagagttacgagccgtcggctttgcgatgcgtcatctcgcttgg
tgtggtgtgttgcaagacgtcttttctcgaacaaagtttatgtccatagtgtctgttgag
ccaagacgaacgaatgctgaagaaaaccagtcggcttttgcgctctcgcgcgagctcacg
cacgtcatgcgactcgatggcgacgcgatcaagaacttgcacttgctctatggcgacact
gggaagactacgggttcgctctacgagtttcttaatcacacgtttaccgctcccggtcgt
cgacggctgcgacaatggcttctccgtccgctacaagatgtgcgcgccatcgacgctcgc
ctggacgtcgtgcgagagttctccaacaatcacgtcttgctacaaactttccgtgacaga
ctcaagcacttcaagtgggaccacgagcgacttttcgcaaagtcgtgtcgattggctatc
aagtgtacgaaagtgtacaatatcgttcgattcaatcaaacgtcgccgttgacgcaagaa
gacgagatgggtctcagagaactcgcgccgaaaggcgcgacgaagctcgaagagattctt
atcgacgctgtgaatatgattagcttttgggaaatgcacaaaagcgcacttgttacattt
gtggacttggttcgcgcgttgatcgagatacgcgacgtggtttccaccttgagtgaaatt
gcagagcgtaacgtctccgttgcgagcttacatcgcgacgtcgaagacgcgatatcgttt
cttcgtgagttgcgttcgtgtctagaagatagacggaaagaaaacacgaaaaacaaagaa
agatacatcgttccaagcgcacttgtgtttcgtgactacggtgagtttgcggcggcggcg
gagcgagagagagcgcaagatccaatagttcgaaaacacgcgcagcgccaacggcgagaa
ctgctgagaaacatttacattccactcagcgatgatgacgagcgagacgatgaagagcaa
gacgcggccgaccgcgctgacttagcggcggctaacgcatttactgaagtgatgcatgcc
ttttacgaagaaatccctcgttttgaacgagtggtgagcgccatggcagatttagacgtt
ttacaaagttttgccacgtcttgtgcgtcttcaagagagctcgtctgcagttggcaccct
ctactcaagccgagtatggtggacgacgccaagagaatcacgcataacagtggcatcgtc
gataatgatgtatcgatgaagacgcccttcgtgcttcttactggtcctaatatgtcggga
aaatcttccatactacgccaagttgctattattgtcatcatggcgcaaattggttgctac
gttcccgcggcatcttgcgaaatcagcgtggccgacgctgtgatgacccgacttggcggc
gacgacaatttcgccaacggcgtaagcacatttttgaacgaaatgaaaagtacggcgaaa
atcatgaacgacgtaacttcgtctacactggtcatacttgatgaactgggcagaggtacg
tctaccttggatggctactcgatcgcattcgcgacgagccttgaattatgctcttgtgct
caagctcctcgcgtgttgttcgccacgcactaccacgagttggacaaagatttggcgaga
caagagattgcgcgaggtaagtttgtcacaaagcacatagacgtatccagtactcgctca
ggcgcgcttaagatgacgtataagctcaagaatggtccagcacctctcggatcgtgcgcg
ttgaatgtcgcacgcctcgctggctttcctcctggaattctcacccgcgcttcgcacgtc
tcgcaaaccgtcaccttcaaagggcgagttaaggatagcggcttctcaagatcctcgtat
gtaccgccaaaggcgttactaagtaatgaagaacatctcatgctttcagcgctcctgggc
gatcccgctctgaccggtgacgccgataggctcggcgacggcgttgagtggtgccgacgc
ttccatgccctgtggcggaagtgcaacgatttatcgaaccgcgcgaacgagccgtga
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