Ostreococcus lucimarinus: OSTLU_32483
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Entry
OSTLU_32483 CDS
T01029
Symbol
RPS27a
Name
(RefSeq) Ribosomal protein S27a, component of cytosolic 80S ribosome and 40S small subunit
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03010
Ribosome
olu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OSTLU_32483 (RPS27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OSTLU_32483 (RPS27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
olu03011
]
OSTLU_32483 (RPS27a)
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_32483 (RPS27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
olu04147
]
OSTLU_32483 (RPS27a)
Ribosome [BR:
olu03011
]
Ribosomal proteins
Eukaryotes
Small subunit
OSTLU_32483 (RPS27a)
Archaea
OSTLU_32483 (RPS27a)
Ubiquitin system [BR:
olu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
OSTLU_32483 (RPS27a)
Exosome [BR:
olu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OSTLU_32483 (RPS27a)
Exosomal proteins of colorectal cancer cells
OSTLU_32483 (RPS27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Ubiquitin_5
Dsc3_N
TBK1_ULD
DUF2604
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
5002673
NCBI-ProteinID:
XP_001418619
JGI:
32483
UniProt:
A4RZS0
LinkDB
All DBs
Position
7:join(133184..133205,133505..133935)
Genome browser
AA seq
150 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGGKKRKKKTYTKPKKVKHVHKKVKLATLKLYKVDDAGKVERLRKE
CISPTCGAGVFVAQMFDRVYCGKCCQSWAL
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgtcaagacactgacgggtaagaccatcactttggaagtggagtcctcg
gacaccatcgacaatgtgaaggccaagatccaagacaaggagggcatcccgccggatcaa
cagcgtttgatcttcgccgggaagcagctcgaagacggccgcacgctcgccgactacaac
atccaaaaggagtccacgctccacttggtgttgcgcctgcgtggcggtggtaagaagcgt
aagaagaagacgtacaccaagccgaagaaggtcaagcacgtgcacaagaaggtcaagctc
gcgactttgaagctttacaaggttgacgacgcgggcaaggttgaacgcctccgcaaggag
tgcatttccccgacgtgcggcgccggcgtcttcgtggcgcaaatgttcgatcgcgtctac
tgcggcaagtgctgccaatcttgggccttgtaa
DBGET
integrated database retrieval system
