Ostreococcus lucimarinus: OSTLU_32642
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Entry
OSTLU_32642 CDS
T01029
Symbol
CPN60B
Name
(RefSeq) chaperonin 60 beta chain, chloroplast
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_32642 (CPN60B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_32642 (CPN60B)
03110 Chaperones and folding catalysts [BR:
olu03110
]
OSTLU_32642 (CPN60B)
03029 Mitochondrial biogenesis [BR:
olu03029
]
OSTLU_32642 (CPN60B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
olu04147
]
OSTLU_32642 (CPN60B)
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OSTLU_32642 (CPN60B)
Messenger RNA biogenesis [BR:
olu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OSTLU_32642 (CPN60B)
Chaperones and folding catalysts [BR:
olu03110
]
Heat shock proteins
HSP60 / Chaperonin
OSTLU_32642 (CPN60B)
Mitochondrial biogenesis [BR:
olu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OSTLU_32642 (CPN60B)
Exosome [BR:
olu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OSTLU_32642 (CPN60B)
Exosomal proteins of other body fluids (saliva and urine)
OSTLU_32642 (CPN60B)
Exosomal proteins of breast cancer cells
OSTLU_32642 (CPN60B)
Exosomal proteins of colorectal cancer cells
OSTLU_32642 (CPN60B)
Exosomal proteins of bladder cancer cells
OSTLU_32642 (CPN60B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
5002681
NCBI-ProteinID:
XP_001418926
JGI:
32642
UniProt:
A4S076
LinkDB
All DBs
Position
7:complement(join(405123..406840,407080..407123,407409..407431))
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AA seq
594 aa
AA seq
DB search
MFATTTMSATAATFSARTRVADGKTIAVNVRRAGGARTRAPLSVVAAAKNLYFNKNDGSA
LKKMQKGVDKLASVVGVTLGPKGRNVVLESKFGSPKIVNDGVTVAKEVDLEDPVENVGAK
LVRQASQKTNDQAGDGTTTATVLSAAMIAEGMKIVMAGTNPVQLTRGMDKTVKALVEVLK
GLSKDVADEELAKVASISAGGNMEVGEMIAAAMAKVGRKGVISLEEARSVDNNLIVVEGM
QFDRGYISPYFVTDPERMTCVYDQCKLLLVDKKISTARDMIGILEAAIQQGFPLMIIAED
IEQEALATLVVNKLRGSLKITAIKAPGFGERKSQYLEDIAILTGGTVVKEELGLSLDKCG
VEVLGNAARVELGKESTTIVGAGDTAAEVAARVKQINRLVEATEADYEKEKLNERAARLS
GGVAIIQVGAQTETELKEKKLRVEDALNATKSAVEEGIVIGGGCTFLKLAAAVDEIKATL
ENDEQRVGADIIKRALSYPIRLVAHNAGVNGSVACEKVMSSKDPNFGYNAATGEYEDLMK
GGVLDPTKVIRCSLENACSVAKIFLTSDVVVCEIPEDEEPAAGGSPMDNSGYGN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccacgacgacgatgagcgccacggccgccactttttccgcgcgaacgcgcgtc
gctgacggtaaaacgatcgccgtcaatgtgcgacgcgctggtggcgcgcgaacgcgcgcg
ccgttgagcgtggttgccgcggcgaagaatttgtacttcaacaaaaacgacgggtcggcg
ttgaagaagatgcaaaagggcgtcgataaactcgcgagcgtcgtgggcgtgacgctcgga
ccgaagggtcgtaacgtcgttttggagtccaagttcggttctccgaagattgtgaacgat
ggtgtgaccgtggccaaggaggttgacctcgaagacccggttgaaaacgtcggtgcgaag
ctcgtgagacaagcgtcgcaaaagacgaacgaccaagcaggcgacggcaccacgacggcc
accgtgctctctgcggcgatgattgcggagggtatgaagattgtcatggctggtactaac
cccgtgcagctcacgcgcggtatggacaagacggttaaggcgctcgttgaagttcttaaa
gggctctccaaggacgtcgccgacgaggaacttgcgaaggttgcctccatctccgccggc
ggtaacatggaagttggtgaaatgatcgccgccgccatggccaaggttggtcgcaagggt
gtgatctctctcgaggaggcgcgatccgtcgacaacaacctgatcgtcgtcgaagggatg
caattcgatcgcggttacatctctccgtacttcgtcacggatcccgagcgcatgacgtgc
gtgtacgatcaatgtaagttgctgctcgttgacaagaagattagcactgctcgcgacatg
attggcatccttgaagccgcaattcagcaaggtttcccgctcatgatcatcgccgaagac
atcgaacaagaagccctcgcgacgctcgtcgtgaacaaacttcgcggttcgctcaagatc
accgccatcaaggcgccaggtttcggcgagcgtaagagccaataccttgaagatatcgcc
atcctcaccggtggtaccgtcgtcaaggaagagctcggcttgagcttggacaagtgcggc
gtcgaagtgctcggtaacgccgcgcgcgtcgaactcggcaaggagtctaccaccattgtt
ggcgccggcgacaccgccgccgaagtggctgctcgcgtcaaacaaattaaccgcctcgtc
gaagccaccgaagcagactacgagaaggagaagctcaacgaacgtgcggcgcgtctttcg
ggtggtgttgccattatccaagtcggtgctcaaactgagactgagctcaaggagaagaaa
cttcgtgtcgaggatgcgttgaacgccacgaaatccgccgtcgaagaaggcatcgtcatt
ggcggtggttgcaccttcttgaagcttgcggcggctgtcgatgaaatcaaggcaaccttg
gagaacgacgagcaacgagtcggtgcggacatcatcaagcgtgctttgtcctacccgatc
cgtctcgtcgcgcacaacgccggtgtgaacggttccgtcgcgtgcgagaaagtcatgtcc
tctaaggacccgaactttggttacaacgcggcgactggggagtatgaggatctcatgaag
ggtggtgtgctcgatccgaccaaggtcattcgttgctctttggagaacgcttgctccgtc
gcgaagatcttccttacttccgacgtggtggtgtgcgaaatcccggaggatgaagagccc
gcagctggcggttcgccgatggacaactcgggctacggcaactaa
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