Ostreococcus lucimarinus: OSTLU_34689
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Entry
OSTLU_34689 CDS
T01029
Name
(RefSeq) predicted protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSTLU_34689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_34689
Enzymes [BR:
olu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OSTLU_34689
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
OSTLU_34689
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
OSTLU_34689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
HHH
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
5003869
NCBI-ProteinID:
XP_001419864
JGI:
34689
UniProt:
A4S364
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All DBs
Position
9:complement(639148..640170)
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AA seq
340 aa
AA seq
DB search
MPLECNSKVADLLSEMAKINQDALREVYKAKQYAAAASALRSLNFEVQSIDQVDVIPMLK
KRDGKIRKYVQEILTTGKLTALQSLRQRPDVKSCVELSGIHGVGPVTARKLFDKGYKSLA
DLRAPGVPRDTLTPTQWIGLKYYEEFKQRIPREEVSHIATAVREAANTFMKDEVRCYCVG
SFRRGKADSGDVDVLVECRDVSLANDLLMHILNDLRAGSPSPRSGILTDDLQVGDVQYMG
VAALQQPLRADDQAPPVHRRIDIKVYETDAFPTALLYFTGSDKFNRSMRLWAKRKGYALQ
DKGLFRDRSEAAASRVRVRDEKDIFDALQLDYVAPKDRNV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctttggaatgcaactcgaaggttgcagatttactctctgagatggcgaaaatcaac
caggacgcgctgagagaagtgtacaaagcaaagcaatacgccgccgcggcgagtgcgttg
cgttctttgaatttcgaagtgcaatcaatcgatcaagttgacgtgattccgatgttgaaa
aaacgggacggcaagatacgcaagtacgtgcaagagatattgaccactggtaagctgacg
gcgctgcaaagtttacgtcagaggccagatgtgaaatcgtgcgtagaactctccgggatc
cacggcgtcggccctgtcaccgctcgaaagctcttcgacaaagggtacaaatccctcgca
gacttgcgtgcgccgggcgtaccgcgtgacactctcacgccgacgcagtggatcggtctg
aagtattacgaagaattcaagcaacgtataccacgcgaagaagtcagtcacatcgctacc
gctgttcgtgaggcggcgaatacgttcatgaaggatgaagtgcgatgctactgcgttggc
tctttccgcagaggcaaagcagattcgggcgacgtcgacgttttggtcgagtgtcgcgac
gtctctctcgccaacgacctattgatgcacatactgaacgacttgcgcgcgggtagccca
agcccacgaagtggaatcttgacggatgacttgcaagtcggcgacgtgcagtacatggga
gtcgccgctcttcagcagcccctacgcgcggatgaccaggcaccgcccgtgcatcgcaga
atcgacatcaaagtctacgaaaccgacgcatttcccacggcattgctctacttcaccggt
agcgacaagtttaatcgaagcatgcgattgtgggctaagcgcaaaggttatgccttgcaa
gacaaaggcttgttccgcgaccggtccgaagccgcggcttcgcgcgttcgcgttcgcgac
gaaaaagacatcttcgacgcattacaattggattacgtcgccccgaaagatagaaatgtt
tag
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