Ostreococcus lucimarinus: OSTLU_34867
Help
Entry
OSTLU_34867 CDS
T01029
Name
(RefSeq) predicted protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
olu03016
]
OSTLU_34867
Enzymes [BR:
olu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OSTLU_34867
Transfer RNA biogenesis [BR:
olu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OSTLU_34867
Prokaryotic type
OSTLU_34867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
5003729
NCBI-ProteinID:
XP_001419728
JGI:
34867
UniProt:
A4S2C4
LinkDB
All DBs
Position
9:complement(join(155396..157093,157184..157444))
Genome browser
AA seq
652 aa
AA seq
DB search
MSHAPSSASWRENDAIEHVEERLVGLELYANAAAGFDGVLKERYSDFIVREIDIESGEAV
VLNELSATCDVEIDARERKKFEAMKAKSIEEAMKEFEALCGAEDARRLREFLATPGVTRR
SQKTHDGKAETPQPLVLEPTTDKAKRTQIHQFFKKHFLLPTDNVVESNEEEKEALKNLKK
PSSSVRVHAAVKQGKKRTRVEAMDHRAVGNFWPEGVPEHVRFAFCKENKESYEMLNVIAR
ALKVNFKSIGVAGTKDKRGVTTQHVTVHRVRAKRLAKLVLYGCKIGNYTYVDRQLGFGDH
CGNEFEITLRGIDPDVVGNVEEAVRALKSSGTINYYGLQRFGSAGGKHATHKIGIELLRG
EWQAAIDALLLPREGERDDVMKARLKWMETKDPNETLKLMPRWCAAERCVLERMSKVRST
DLVGSLLAVPKQIRLMYIHAYQAYLFNRVVSERIRKYGVNTVVEGDLVLEEGNCAGDEGE
DDMNGDTRVSMPRVRVVTAEEAALGAIDSSLVVLPLPGNSITYPTNLGDVYDRFAAEDGI
SLNTTTHSVREFAINSFTGDYRRCFLKPTNVSHTVISYADAAADLVLTDLDRINGITERT
IEDGPLRAVTVKFTLPPSSYATMVLRELMKANTSVSSHKRKTLDARAAASVE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgcgccgtcgtcggcatcgtggcgcgagaacgacgcgatcgagcacgtggag
gagcgactcgtcggcctcgagctctacgccaacgccgccgccggattcgatggtgtgctg
aaagaacgctacagcgatttcatcgtgcgggagatcgacatcgagagcggtgaggcggtg
gttttgaatgaactgagcgcgacgtgcgatgtagagatcgacgcgcgagagcggaagaag
tttgaggcgatgaaggcgaaaagtattgaggaggcaatgaaagaattcgaagcgctgtgc
ggtgcagaggacgcgcggcgactgagagaatttttagccactcccggggtgacgcgtcga
agtcagaagacgcacgatggaaaggcggaaacgccccaaccgctcgtgctcgagccgacg
acggataaagcgaaacggacgcaaattcatcaatttttcaagaaacactttttattacct
acggacaacgtcgtggagtcgaacgaggaagagaaggaagctctcaagaacttgaaaaag
ccgtcttcgagcgtgcgcgtgcatgccgccgtcaagcaaggcaagaagcgaacgcgcgtg
gaggcaatggatcatcgagcggtgggaaacttttggcccgaaggcgttccagaacatgtg
cgatttgcgttttgcaaagaaaacaaagagtcttacgagatgctcaacgtcatagcccgg
gccttgaaggtgaacttcaagtctattggcgtcgccggaacgaaggacaagcgcggagtg
acaacgcaacacgtcaccgtgcacagagttcgggcgaaaaggttggccaagctggtactt
tatgggtgtaaaattggtaactatacgtatgtcgacagacaacttggtttcggagaccat
tgcgggaacgagtttgagataacgctccgaggcatcgacccagacgtcgtcgggaacgtg
gaggaggcagtgcgcgcactcaagtcttcagggaccatcaactactacggtttgcagaga
tttggtagcgctgggggcaaacacgcaacgcataaaattggaattgaacttttacgtggc
gaatggcaagctgcgatcgacgctttgctgctgccgcgcgaaggcgagcgcgacgatgtc
atgaaggcgcgcttgaaatggatggaaacaaaggatcccaatgagactttgaagttgatg
ccacgctggtgcgcggcagagcgctgtgtgctcgagcgcatgtcaaaagttcgctccacg
gacttggtcggatcgctgttggccgtgccgaagcagattagactgatgtacattcacgcc
taccaggcatacttgtttaatcgtgtcgtgtcggagcgcattcgtaagtacggagtcaac
acggtcgtcgaaggtgacttagtgctcgaagagggaaactgtgccggagatgaaggcgaa
gacgatatgaatggcgatactcgggtgagtatgccgagggttcgcgtagtgacagccgag
gaagccgctttgggtgcgattgactcgtcgctcgtggtgctgccgcttcctggaaactcg
ataacgtacccaacaaatttgggtgatgtttacgatcgattcgccgcggaggatggaatc
agtttgaatactacgacgcattcggttcgtgaattcgcaatcaactcattcaccggtgac
taccgtagatgctttctcaaacccacaaacgtatcgcacaccgtcatttcgtacgcggac
gcggcggcggatttggttttgaccgatctcgatcgcatcaatggcatcaccgaacgcacc
atcgaagacggccctttacgtgccgtaacggtgaagttcactctgcccccgtcttcttac
gccaccatggttcttcgggagttgatgaaggcgaacacctcggtgagctcgcacaagcgc
aagacgctcgacgcgcgagcggcggcttccgtagagtag
DBGET
integrated database retrieval system
