Ostreococcus lucimarinus: OSTLU_35082
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Entry
OSTLU_35082 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10755
replication factor C subunit 2/4
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03030
DNA replication
olu03410
Base excision repair
olu03420
Nucleotide excision repair
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSTLU_35082
03410 Base excision repair
OSTLU_35082
03420 Nucleotide excision repair
OSTLU_35082
03430 Mismatch repair
OSTLU_35082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
olu03032
]
OSTLU_35082
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_35082
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_35082
DNA replication proteins [BR:
olu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OSTLU_35082
DNA Replication Termination Factors
ELG1-RFC complex
OSTLU_35082
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
OSTLU_35082
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OSTLU_35082
Check point factors
HRAD17(Rad24)-RFC complex
OSTLU_35082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
RuvB_N
AAA_22
AAA_5
AAA_11
AAA_16
AAA_14
Mg_chelatase
AAA_assoc_2
AAA_28
Cdc6_lid
TIP49
AAA_24
nSTAND3
SLFN-g3_helicase
AAA_3
AAA_18
ResIII
AAA_2
RNA_helicase
AAA_30
AAA_19
Parvo_NS1
AAA_7
ATPase_2
AAA_25
bpMoxR
PhoH
AAA_17
Motif
Other DBs
NCBI-GeneID:
5003537
NCBI-ProteinID:
XP_001419724
JGI:
35082
UniProt:
A4S2B7
LinkDB
All DBs
Position
9:complement(144284..145312)
Genome browser
AA seq
342 aa
AA seq
DB search
MVDAEATRPQRAEAHAPWVEKYRPRVVKDVASQEQIVGVLENALKTGNMPHCLFYGPPGT
GKTTTALAIAKELYGPELYKQRVKELNASDERGISVVRNKIKTFASQAVGAPAPGYPSPP
YKILILDEADAMTGDAQSALRRMMETYSKVTRFFLLCNYVTKIIDPIASRCAKFRFSPLA
QETMGARLKFIGEQEGLEMSDDVFAMCSKHSGGDMRKAITLLQSAARLFAGKISGASIVE
VAGHIPDEKIKKMYDLCREGKFEEAQAHMEDILRDGFSGLKILDQYSDYVLEADCSDEVK
AEIFIKLGEVDRFLAQGADEGMQLATLVSTSIKALAKMASAA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgcggaagcgacgcgtccgcagcgcgccgaggcgcacgcgccgtgggtggag
aaataccgccctcgcgtcgtcaaggatgtggcgagccaggagcaaatcgtgggggtgctg
gaaaacgcgctgaagacggggaacatgccccactgcctgttctacggaccgccgggaact
gggaaaaccaccaccgcgctggcgatcgcgaaggagttgtacggaccggagctgtataag
caaagggtgaaggagttgaacgcgtcggacgagagaggcatcagcgtggtccgcaacaag
atcaaaacctttgcctcgcaagccgtcggtgcgcccgcgccgggatacccgtctccgccg
tataagatattaatcttggacgaagcggacgccatgacgggcgacgcgcaatcggcgctg
cgaaggatgatggagacgtattcaaaagtcactcggttctttctgttgtgcaactacgtg
acgaaaatcatcgatccgatcgcgagtcgatgcgcaaagtttagattctcaccgctcgct
caggaaactatgggtgcgcgattgaagttcatcggcgaacaagaaggtttggagatgagt
gacgacgtgttcgcgatgtgttcaaagcactcgggaggagacatgcgcaaggcgattacg
ttgttgcaaagcgcagcgcgtttgttcgcggggaagattagtggtgcgagcatcgttgaa
gtggcggggcacattccagatgaaaaaatcaaaaagatgtatgatctgtgccgtgaaggc
aagtttgaagaggcgcaggcgcacatggaggacattttgcgcgacggtttttcaggactc
aaaattctcgatcagtactctgactacgtcctggaggcagattgctcggacgaggtcaag
gcggagatcttcatcaaactcggtgaagtagacaggtttttggcacaaggagcggatgag
ggaatgcagttggccacgttggtgagcacgtccatcaaggcgctggcaaagatggcgtcc
gcggcgtaa
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