KEGG   Ostreococcus lucimarinus: OSTLU_35082
Entry
OSTLU_35082       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K10755  replication factor C subunit 2/4
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03030  DNA replication
olu03410  Base excision repair
olu03420  Nucleotide excision repair
olu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OSTLU_35082
   03410 Base excision repair
    OSTLU_35082
   03420 Nucleotide excision repair
    OSTLU_35082
   03430 Mismatch repair
    OSTLU_35082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:olu03032]
    OSTLU_35082
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_35082
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_35082
DNA replication proteins [BR:olu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    OSTLU_35082
  DNA Replication Termination Factors
   ELG1-RFC complex
    OSTLU_35082
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    OSTLU_35082
DNA repair and recombination proteins [BR:olu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     OSTLU_35082
  Check point factors
   HRAD17(Rad24)-RFC complex
    OSTLU_35082
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 RuvB_N AAA_22 AAA_5 AAA_11 AAA_16 AAA_14 Mg_chelatase AAA_assoc_2 AAA_28 Cdc6_lid TIP49 AAA_24 nSTAND3 SLFN-g3_helicase AAA_3 AAA_18 ResIII AAA_2 RNA_helicase AAA_30 AAA_19 Parvo_NS1 AAA_7 ATPase_2 AAA_25 bpMoxR PhoH AAA_17
Other DBs
NCBI-GeneID: 5003537
NCBI-ProteinID: XP_001419724
JGI: 35082
UniProt: A4S2B7
LinkDB
Position
9:complement(144284..145312)
AA seq 342 aa
MVDAEATRPQRAEAHAPWVEKYRPRVVKDVASQEQIVGVLENALKTGNMPHCLFYGPPGT
GKTTTALAIAKELYGPELYKQRVKELNASDERGISVVRNKIKTFASQAVGAPAPGYPSPP
YKILILDEADAMTGDAQSALRRMMETYSKVTRFFLLCNYVTKIIDPIASRCAKFRFSPLA
QETMGARLKFIGEQEGLEMSDDVFAMCSKHSGGDMRKAITLLQSAARLFAGKISGASIVE
VAGHIPDEKIKKMYDLCREGKFEEAQAHMEDILRDGFSGLKILDQYSDYVLEADCSDEVK
AEIFIKLGEVDRFLAQGADEGMQLATLVSTSIKALAKMASAA
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggtcgacgcggaagcgacgcgtccgcagcgcgccgaggcgcacgcgccgtgggtggag
aaataccgccctcgcgtcgtcaaggatgtggcgagccaggagcaaatcgtgggggtgctg
gaaaacgcgctgaagacggggaacatgccccactgcctgttctacggaccgccgggaact
gggaaaaccaccaccgcgctggcgatcgcgaaggagttgtacggaccggagctgtataag
caaagggtgaaggagttgaacgcgtcggacgagagaggcatcagcgtggtccgcaacaag
atcaaaacctttgcctcgcaagccgtcggtgcgcccgcgccgggatacccgtctccgccg
tataagatattaatcttggacgaagcggacgccatgacgggcgacgcgcaatcggcgctg
cgaaggatgatggagacgtattcaaaagtcactcggttctttctgttgtgcaactacgtg
acgaaaatcatcgatccgatcgcgagtcgatgcgcaaagtttagattctcaccgctcgct
caggaaactatgggtgcgcgattgaagttcatcggcgaacaagaaggtttggagatgagt
gacgacgtgttcgcgatgtgttcaaagcactcgggaggagacatgcgcaaggcgattacg
ttgttgcaaagcgcagcgcgtttgttcgcggggaagattagtggtgcgagcatcgttgaa
gtggcggggcacattccagatgaaaaaatcaaaaagatgtatgatctgtgccgtgaaggc
aagtttgaagaggcgcaggcgcacatggaggacattttgcgcgacggtttttcaggactc
aaaattctcgatcagtactctgactacgtcctggaggcagattgctcggacgaggtcaag
gcggagatcttcatcaaactcggtgaagtagacaggtttttggcacaaggagcggatgag
ggaatgcagttggccacgttggtgagcacgtccatcaaggcgctggcaaagatggcgtcc
gcggcgtaa

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