KEGG   Ostreococcus lucimarinus: OSTLU_37792
Entry
OSTLU_37792       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OSTLU_37792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:olu03009]
    OSTLU_37792
Ribosome biogenesis [BR:olu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    OSTLU_37792
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 EIF3I Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_LRRK2 Beta-prop_VPS8 Beta-prop_RSE1_2nd VPS11_N PQQ Beta-prop_RIG_1st Nucleoporin_N ELYS-bb Beta-prop_IFT80_2nd CFAP43_N UTP15_C Tsr0524-like VPS8_N
Other DBs
NCBI-GeneID: 5005993
NCBI-ProteinID: XP_001421820
JGI: 37792
UniProt: A4S8U7
LinkDB
Position
16:join(39719..40153,40208..41224,41348..41947,42035..42787)
AA seq 934 aa
MALFAPYRALGLVNAQRGCALVVKRRGTETFVTVSAEDAFAVYDARKLTLVFRSARFATS
DARGIGAMAVRKDYTFCAIGREIRCAKRLAECCEGLGRDDGSGHDARVTTLHAFGRHLAS
VDENGAVKMWDIDDDAMRARERAWALGARAMEMPRTFAATTVCHPDGYVDKLLFGSSDGR
LALMNVRAGKLVHEFAGWGSAVTALENSPATDVVAVGLADGRVLLVNVLEDKVLFTLTPE
RGVKVTALAFRTDDQDDVLCVGDETGRVTVWDLEKRSLRTLIVQCHEGPVVSLKFLDGQP
VMVSSGFDNTLKEWIFDREDGDARLLRFRAGHSKPPTSVSFYGEGKKLLAAGSDRTLRFF
HAFRDQQNIELSQKNVSKRAKKIGVAEEELKLSPVTKMAWGELRERDWANVVTAHEGSNK
AYTWRISKGALGEHILQCPKDDGKCEVKSVAISACGNFAFLGAANGAIHRFNLQSGAHRG
AFERGKLRVAAHDGEVTCIQAHCANRSVVTAGVDGMIRVWKFSELKIDLEIDVGCGVRCG
HLHEDSLLVVGCADKHVRVYDTMTGKRVRTFKPRGQENEAGDITSVQISENGKWIFVLDT
TGTIRVYDIPAARLIQHMILGADKVTAMSFSPRMDFLATVHENRVGLYLWVNMPMFDYDT
KLAYGRKVSIALPRKHAESDADGGHRNLQELEEYFKEMATGPKQIAPGMITLAMMPQTQI
EMLLNLETVQAKSKVKTDDKEPELAPFFLPTAAASDDVRRSVFDPARESELNAKDDTGDD
DSKAPKSRILRQGADLAGASATPLLTLILRGERSEDYTEALEFLKNASIHVVDAELRSLG
PWDHKFMSEDDVKTLRSAIKFFTAAIASGMYYEMVNAQLNVFLNVHTTAIMQSSALVDEC
HALREAMHKSYSRIDDLFNEIRCTLSFHIGDAGV
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcgctcttcgcgccgtatcgcgcgctcggcctcgtgaacgcgcagcgaggatgcgcg
ctcgtcgtcaagcggcgcgggacggagacgttcgtcacggtgagcgcggaggacgcgttc
gcggtgtacgacgcgcgaaaactcacattggtctttcgaagcgcgcggttcgcgacgagc
gacgcgcgagggatcggggcgatggcggtgaggaaggattacacgttttgcgcgatcgga
cgggagataaggtgcgcgaaacgattggcggagtgctgcgaaggactggggcgggacgac
ggctcgggacacgacgcgcgggtgacgacgctgcacgcgttcggacgacacttggcgagc
gtggacgaaaatggggcggtgaagatgtgggacatcgatgatgacgccatgcgggcgcgc
gagcgggcgtgggcgctcggcgcgcgagcgatggagatgcctcggacgttcgcggcgacg
acggtgtgtcatcccgatggatacgtggataagttactgtttggctcgagcgatgggcga
ttggcgctgatgaacgtgcgagcgggtaaattggtgcacgaatttgcgggctgggggtcg
gcggtgacggcgctggagaactcgccggcgacggatgtcgtcgccgtcggtttggcggat
gggcgcgtgcttttggtgaacgtattagaagataaagttttgtttacgctcacgcccgag
cgtggggtaaaggtgacggcgctggcgtttagaacggatgatcaggacgacgtgctgtgc
gtcggcgacgaaacgggacgcgtgacggtttgggatttggaaaagcgctcgttgcgcacg
ctcatcgtgcaatgtcacgaaggtccggtggtttcgttgaaatttctcgatggacaaccg
gtgatggtgtcgagtgggttcgataacacgttgaaggagtggatttttgatagagaagac
ggcgacgctcgactcttgcgctttcgcgccggacactccaagccgccgacgagcgtgtcg
ttctacggtgaaggcaagaaacttttagcggctgggagcgatcgaacgttgcgatttttt
cacgcgtttcgtgatcagcaaaacatcgagttgagccaaaagaatgtcagcaagcgcgcg
aagaaaatcggcgtcgcggaggaagagttgaaactttctccggttacgaagatggcgtgg
ggcgagcttcgcgagcgcgattgggcaaacgtcgtcaccgcgcacgaaggttcaaacaag
gcgtacacgtggcgtatttccaaaggtgcgctcggtgaacacattttgcaatgtccgaag
gacgacggcaagtgcgaagtcaagtcggttgcgattagcgcgtgcggcaactttgccttt
ctcggtgccgcaaacggggcgatccatcgattcaacttgcaatcgggcgcgcatcgtggc
gcgttcgagcgcggaaaattgcgcgttgccgcgcacgacggtgaagtgacgtgcatacaa
gcacactgcgcgaatagaagcgtcgtcaccgcgggtgtcgacgggatgattcgcgtgtgg
aaatttagcgagttgaagattgacttggaaatcgacgtcgggtgcggcgtgcggtgcggt
cacttgcacgaggactcattgctcgtcgttggatgcgctgataagcacgtgcgcgtatac
gataccatgacgggtaaacgtgttcgcacgttcaagccacgcggtcaggaaaatgaggct
ggagatatcacgagcgtgcaaatcagtgaaaacggtaaatggatcttcgtcctcgacacc
accggaacgatacgagtgtacgatattcccgccgcgagattgattcaacacatgattctc
ggtgcggataaagtcaccgccatgagcttttcaccgcgaatggactttttagccaccgtg
cacgagaacagggtcgggttgtatttgtgggtgaacatgccgatgtttgattacgacacc
aaattggcgtacgggcgcaaagtttccatcgcacttccgagaaaacacgcggaatccgac
gcagacggcggccatcgcaatttgcaagagttggaagaatatttcaaagaaatggccacc
ggcccgaaacaaatagcccctggcatgattactctggcgatgatgcctcagacgcaaatc
gaaatgctactgaatctggagacggtgcaagcgaagagtaaggtgaagaccgatgacaaa
gaaccggaattggcgccgttctttctgcccacagccgccgcgagcgacgacgtgcgtcga
tctgtcttcgatcccgcgcgagaatccgagctcaacgccaaagacgacaccggcgatgat
gattccaaagcaccgaagagtcgaattttgcgtcaaggcgcggatctcgccggcgcgtcc
gcgacgccgctcttgacgttgattcttcgaggagaacgatcggaggactacaccgaagcg
ctcgaattcttgaagaatgcgtcgatacacgtcgtcgacgccgagctgcgatcgctcgga
ccttgggatcacaagttcatgtccgaggacgacgtgaaaactttgcggagcgccatcaaa
tttttcaccgccgcaatcgcgagcggcatgtactacgagatggtcaacgcccaactcaac
gtgtttctcaacgtgcacaccaccgcgatcatgcaatccagcgcgctcgtcgacgagtgt
cacgccctgcgagaggccatgcacaaatcctacagcaggatcgacgatttgttcaacgaa
attcggtgcacgctcagtttccacatcggcgacgccggcgtctag

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